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The map label for this gene is arnC [H]

Identifier: 94313512

GI number: 94313512

Start: 1209137

End: 1210138

Strand: Direct

Name: arnC [H]

Synonym: Rmet_4590

Alternate gene names: 94313512

Gene position: 1209137-1210138 (Clockwise)

Preceding gene: 94313511

Following gene: 94313513

Centisome position: 46.86

GC content: 63.37

Gene sequence:

>1002_bases
ATGCAAACGCCTCTCTCTCTAAGCTCCGTCGAGGTCTCGGTCGTCATCCCCGTCTACAACGAGGAGGGTGGCCTGCAGGC
GCTGTTCGACCGCGTCTATCCGGCGCTGGACAGCCTGGGCGAATCCTACGAGGTCATCTTCGTCAATGACGGCAGCGTCG
ACCGCTCGCCGCAGATGCTGGCCGCGCAGTTCCACAAGCGCCCGGACGTGACCCGGGTCATCCTGTTCAACGGCAACTTT
GGCCAGCACATGGCCATCCTGGCCGGCTTCGAGCACACGCGCGGACGCATCGTGATCACGCTCGACGCCGACCTGCAGAA
CCCGCCCGAGGAAATCCCCCGGCTGGTGGCCGAGATGCGCAAGGGCCATGACTACGTCGGCACGATTCGCCGCCAGCGTA
ACGACTCCGCGTTCCGCCGCTACGCGTCGCGCGCGATGAACCGCCTGCGCGAGAAGATCACGAAGATCAAGATGACGGAC
CAGGGCTGCATGTTGCGCGCCTACGATCGCAACGTCATCGACACGATCAATGCGTGCCGCGAAGTCAACACGTTCATTCC
CGCGCTGGCCTACACGTTCTCGTCGAACCCGGTGGAGATCGAGGTCGGCCACGAGCAGCGCCACGCTGGCGAGTCAAAGT
ATTCGCTCTACCAACTGATCCGCCTGAACTTCGACTTGGTCACCGGCTTCTCGATCGTGCCGCTGCAATGGTTCTCGGCG
ATCGGCACGGTGCTGTCGATCTCTTCGGCCGGACTGTTCGTGATCCTGCTGATTCGCCGCTTCCTGCTCGGCTCTGAAGT
CCAGGGTGTGTTCACGCTGTTCGCACTCAACTTCTTCCTGGTCGGCATCATGCTGTTCGGCATCGGCCTGCTGGGTGAGT
ACGTCGGCCGGATCTATCAGGAAGTGCGCGACCGCCCGCGCTACCGCATCCAGGCGGTGCTTGAGCGTGACCCCCGTGAC
CCGAAGACCGACAACGCAGCGGAGGCCTCGTGCGCGCAGTAG

Upstream 100 bases:

>100_bases
CGCATGCCGAGCGCATTGGCCGCGGCATCGTCACGCTGCCGATGTTCCCCGCCATGCAGACAGCCGACGTGGAGCGGGTT
TGCGCAACTCTAAGCGAAAC

Downstream 100 bases:

>100_bases
TCTTTGCCTACCATAACGTCGGTGACCGCTGCCTGCGCGTGCTGCACGCGCGCGGTGTGGACGTGGCGCTGGTCGTCACG
CACCGCGACCGACCCGACGA

Product: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MQTPLSLSSVEVSVVIPVYNEEGGLQALFDRVYPALDSLGESYEVIFVNDGSVDRSPQMLAAQFHKRPDVTRVILFNGNF
GQHMAILAGFEHTRGRIVITLDADLQNPPEEIPRLVAEMRKGHDYVGTIRRQRNDSAFRRYASRAMNRLREKITKIKMTD
QGCMLRAYDRNVIDTINACREVNTFIPALAYTFSSNPVEIEVGHEQRHAGESKYSLYQLIRLNFDLVTGFSIVPLQWFSA
IGTVLSISSAGLFVILLIRRFLLGSEVQGVFTLFALNFFLVGIMLFGIGLLGEYVGRIYQEVRDRPRYRIQAVLERDPRD
PKTDNAAEASCAQ

Sequences:

>Translated_333_residues
MQTPLSLSSVEVSVVIPVYNEEGGLQALFDRVYPALDSLGESYEVIFVNDGSVDRSPQMLAAQFHKRPDVTRVILFNGNF
GQHMAILAGFEHTRGRIVITLDADLQNPPEEIPRLVAEMRKGHDYVGTIRRQRNDSAFRRYASRAMNRLREKITKIKMTD
QGCMLRAYDRNVIDTINACREVNTFIPALAYTFSSNPVEIEVGHEQRHAGESKYSLYQLIRLNFDLVTGFSIVPLQWFSA
IGTVLSISSAGLFVILLIRRFLLGSEVQGVFTLFALNFFLVGIMLFGIGLLGEYVGRIYQEVRDRPRYRIQAVLERDPRD
PKTDNAAEASCAQ
>Mature_333_residues
MQTPLSLSSVEVSVVIPVYNEEGGLQALFDRVYPALDSLGESYEVIFVNDGSVDRSPQMLAAQFHKRPDVTRVILFNGNF
GQHMAILAGFEHTRGRIVITLDADLQNPPEEIPRLVAEMRKGHDYVGTIRRQRNDSAFRRYASRAMNRLREKITKIKMTD
QGCMLRAYDRNVIDTINACREVNTFIPALAYTFSSNPVEIEVGHEQRHAGESKYSLYQLIRLNFDLVTGFSIVPLQWFSA
IGTVLSISSAGLFVILLIRRFLLGSEVQGVFTLFALNFFLVGIMLFGIGLLGEYVGRIYQEVRDRPRYRIQAVLERDPRD
PKTDNAAEASCAQ

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=236, Percent_Identity=26.271186440678, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI1788588, Length=312, Percent_Identity=48.3974358974359, Blast_Score=303, Evalue=7e-84,
Organism=Escherichia coli, GI1788692, Length=305, Percent_Identity=30.8196721311475, Blast_Score=159, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6325441, Length=122, Percent_Identity=33.6065573770492, Blast_Score=76, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24585265, Length=178, Percent_Identity=26.4044943820225, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 37630; Mature: 37630

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTPLSLSSVEVSVVIPVYNEEGGLQALFDRVYPALDSLGESYEVIFVNDGSVDRSPQML
CCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHH
AAQFHKRPDVTRVILFNGNFGQHMAILAGFEHTRGRIVITLDADLQNPPEEIPRLVAEMR
HHHHHCCCCCEEEEEEECCCCCHHHHEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
KGHDYVGTIRRQRNDSAFRRYASRAMNRLREKITKIKMTDQGCMLRAYDRNVIDTINACR
HCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCCHHHHHHHHHH
EVNTFIPALAYTFSSNPVEIEVGHEQRHAGESKYSLYQLIRLNFDLVTGFSIVPLQWFSA
HHHHHHHHHHHEECCCCEEEEECCHHHHCCCHHHHHHHHHHHCHHHHCCCCHHHHHHHHH
IGTVLSISSAGLFVILLIRRFLLGSEVQGVFTLFALNFFLVGIMLFGIGLLGEYVGRIYQ
HHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVRDRPRYRIQAVLERDPRDPKTDNAAEASCAQ
HHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQTPLSLSSVEVSVVIPVYNEEGGLQALFDRVYPALDSLGESYEVIFVNDGSVDRSPQML
CCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHH
AAQFHKRPDVTRVILFNGNFGQHMAILAGFEHTRGRIVITLDADLQNPPEEIPRLVAEMR
HHHHHCCCCCEEEEEEECCCCCHHHHEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
KGHDYVGTIRRQRNDSAFRRYASRAMNRLREKITKIKMTDQGCMLRAYDRNVIDTINACR
HCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCCHHHHHHHHHH
EVNTFIPALAYTFSSNPVEIEVGHEQRHAGESKYSLYQLIRLNFDLVTGFSIVPLQWFSA
HHHHHHHHHHHEECCCCEEEEECCHHHHCCCHHHHHHHHHHHCHHHHCCCCHHHHHHHHH
IGTVLSISSAGLFVILLIRRFLLGSEVQGVFTLFALNFFLVGIMLFGIGLLGEYVGRIYQ
HHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVRDRPRYRIQAVLERDPRDPKTDNAAEASCAQ
HHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA