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Identifier: 94313428

GI number: 94313428

Start: 1104565

End: 1105665

Strand: Reverse

Name: bug

Synonym: Rmet_4503

Alternate gene names: NA

Gene position: 1105665-1104565 (Counterclockwise)

Preceding gene: 94313430

Following gene: 94313427

Centisome position: 42.85

GC content: 65.3

Gene sequence:

>1101_bases
ATGCAGAAGTCCGGAGCCGGGCGGATCGCCGCCGGCATCGCCGGACTCGGCAGCGACCCGGGAAAAAAGGACAACAAGAA
AGGAGACAACCACATGCTGGCAAATCGCCGGAGTGCATTGCTGCGTCTTGGCACCGGAGCGCTGGCGCTGGCAGGTGCCT
TTGCTGGCCTGTCTGGCGCCGGTACCGCCATGGCCCAAGGGGCTTTCCCGTCGAAATCCGTGCGCCTTGTGGTGCCGTTC
CCGGCAGGCGGGGCTACCGACGTGCTGGCGCGGGCGATTGCCGATGGCCTCGGTAAGGCCTGGAAGCGCCCGGTCGTGGT
GGAGAACCGCCCCGGTGCCAGCGGCATGATCGGCGCCGATGCCGTGGCCCGTGCGGAGCCGGACGGCTACACCGCGCTGC
TGACCATCACCACGCTCGTGCAGGCGCCGAGCCTCTACACCAAGGCGCCCTTTGACCCAGTCAAGGACTTCGCGGCGGTA
TCCGAGCTTGGCACCACCAACCTGGTGTTTGCCATCAACAGTAGTGCAGTGCCGGCCACCAGCCTGAAGGAATTTATCGC
GCTGGTCCGTGCCAAGCCCAAGCAGTACTCCTTCGGATCGTTTGGCACAGGCTCGAGCGGCCATCTCTACGGCGAGATAT
TCAACGAATCCGCCAACCTCGACATGATCCACGTCTCCTACAAGGGCGAGGCGCCGGAGTTGAACGACTTGCTCGGTGGC
CAGGTGCCATCCGCGGTGATCTCGGTAATGGGCGCCAAGCCCCACGCCGCGTCCGGGCGTCTGCGCGCGCTTGCCGTGAC
CGGCGCGTCGCGCTCGCCCCAACTGCCTGATGTGCCGACCTTCAAGGAGAGCGGCGTTTCCGGGATGGATTCGCTGGGCT
GGTTCGGCCTGCTGCTGCCAGCCGCCACGCCGCGGCCGATCGTCGAGAAGTTCTCTGCCGACGTCAACAAGGTGTTGGCA
GACCCCGCGGTGCGTATGCGCATGAACGACATGGGCGTGATCCTGACCGGCAGCACGCCCGATGCCTTTACGCAGACCGT
GCAGGCCGACTATGCCCGCTGGGGCAAAGTGATCCGTACCCACAACATTCGTCTTGATTGA

Upstream 100 bases:

>100_bases
GGGATTTGCCAAAGCCTGCCTTCCGTCTGAACGATTCGGCCAATGATTTTGGGTTGTCTGGTCATTGTCCAGACCGTGCC
GGATCACGCACTCTCTCACT

Downstream 100 bases:

>100_bases
GCCTTTGCCTGACATGAAGTCCGCCAGTACATCCCAGCCTTACCGTTCTCCCGCCTGGCCTGCCGGCCTGCCTGGCACGC
TGCATGTGCCGCAGACCAGC

Product: extra-cytoplasmic solute receptor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MQKSGAGRIAAGIAGLGSDPGKKDNKKGDNHMLANRRSALLRLGTGALALAGAFAGLSGAGTAMAQGAFPSKSVRLVVPF
PAGGATDVLARAIADGLGKAWKRPVVVENRPGASGMIGADAVARAEPDGYTALLTITTLVQAPSLYTKAPFDPVKDFAAV
SELGTTNLVFAINSSAVPATSLKEFIALVRAKPKQYSFGSFGTGSSGHLYGEIFNESANLDMIHVSYKGEAPELNDLLGG
QVPSAVISVMGAKPHAASGRLRALAVTGASRSPQLPDVPTFKESGVSGMDSLGWFGLLLPAATPRPIVEKFSADVNKVLA
DPAVRMRMNDMGVILTGSTPDAFTQTVQADYARWGKVIRTHNIRLD

Sequences:

>Translated_366_residues
MQKSGAGRIAAGIAGLGSDPGKKDNKKGDNHMLANRRSALLRLGTGALALAGAFAGLSGAGTAMAQGAFPSKSVRLVVPF
PAGGATDVLARAIADGLGKAWKRPVVVENRPGASGMIGADAVARAEPDGYTALLTITTLVQAPSLYTKAPFDPVKDFAAV
SELGTTNLVFAINSSAVPATSLKEFIALVRAKPKQYSFGSFGTGSSGHLYGEIFNESANLDMIHVSYKGEAPELNDLLGG
QVPSAVISVMGAKPHAASGRLRALAVTGASRSPQLPDVPTFKESGVSGMDSLGWFGLLLPAATPRPIVEKFSADVNKVLA
DPAVRMRMNDMGVILTGSTPDAFTQTVQADYARWGKVIRTHNIRLD
>Mature_366_residues
MQKSGAGRIAAGIAGLGSDPGKKDNKKGDNHMLANRRSALLRLGTGALALAGAFAGLSGAGTAMAQGAFPSKSVRLVVPF
PAGGATDVLARAIADGLGKAWKRPVVVENRPGASGMIGADAVARAEPDGYTALLTITTLVQAPSLYTKAPFDPVKDFAAV
SELGTTNLVFAINSSAVPATSLKEFIALVRAKPKQYSFGSFGTGSSGHLYGEIFNESANLDMIHVSYKGEAPELNDLLGG
QVPSAVISVMGAKPHAASGRLRALAVTGASRSPQLPDVPTFKESGVSGMDSLGWFGLLLPAATPRPIVEKFSADVNKVLA
DPAVRMRMNDMGVILTGSTPDAFTQTVQADYARWGKVIRTHNIRLD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 37897; Mature: 37897

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKSGAGRIAAGIAGLGSDPGKKDNKKGDNHMLANRRSALLRLGTGALALAGAFAGLSGA
CCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC
GTAMAQGAFPSKSVRLVVPFPAGGATDVLARAIADGLGKAWKRPVVVENRPGASGMIGAD
CHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCC
AVARAEPDGYTALLTITTLVQAPSLYTKAPFDPVKDFAAVSELGTTNLVFAINSSAVPAT
HHHCCCCCCCEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHH
SLKEFIALVRAKPKQYSFGSFGTGSSGHLYGEIFNESANLDMIHVSYKGEAPELNDLLGG
HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCHHHHHCC
QVPSAVISVMGAKPHAASGRLRALAVTGASRSPQLPDVPTFKESGVSGMDSLGWFGLLLP
CHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHC
AATPRPIVEKFSADVNKVLADPAVRMRMNDMGVILTGSTPDAFTQTVQADYARWGKVIRT
CCCCHHHHHHHHHHHHHHHCCCHHEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHEE
HNIRLD
CCCCCC
>Mature Secondary Structure
MQKSGAGRIAAGIAGLGSDPGKKDNKKGDNHMLANRRSALLRLGTGALALAGAFAGLSGA
CCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC
GTAMAQGAFPSKSVRLVVPFPAGGATDVLARAIADGLGKAWKRPVVVENRPGASGMIGAD
CHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCC
AVARAEPDGYTALLTITTLVQAPSLYTKAPFDPVKDFAAVSELGTTNLVFAINSSAVPAT
HHHCCCCCCCEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHH
SLKEFIALVRAKPKQYSFGSFGTGSSGHLYGEIFNESANLDMIHVSYKGEAPELNDLLGG
HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCHHHHHCC
QVPSAVISVMGAKPHAASGRLRALAVTGASRSPQLPDVPTFKESGVSGMDSLGWFGLLLP
CHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHC
AATPRPIVEKFSADVNKVLADPAVRMRMNDMGVILTGSTPDAFTQTVQADYARWGKVIRT
CCCCHHHHHHHHHHHHHHHCCCHHEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHEE
HNIRLD
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]