| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is ffcA1 [H]
Identifier: 94313422
GI number: 94313422
Start: 1097263
End: 1099497
Strand: Reverse
Name: ffcA1 [H]
Synonym: Rmet_4497
Alternate gene names: 94313422
Gene position: 1099497-1097263 (Counterclockwise)
Preceding gene: 94313423
Following gene: 94313421
Centisome position: 42.61
GC content: 63.45
Gene sequence:
>2235_bases ATGTCGTCACACCGATCCCGCCATCTGTCATCCCGCACCAGCACCCAGTCCGCATGCCTCCCTTCGCCCAAGCCACTTGC TGCCGCGCTCCATCAGGCGATGCTCTGTCTTGCCGTCGGCTCGGGTGGCATGTCGATCAACGCCATCGCGCAGACTTCCA CGGACAAGGCTCCGGAAACCACCCTTCCTGCAGTGACGGTGAGCGCCGTGGCCGCCAGTGATTCCACCGATCTCCCGGCA GCCTATGCGGGCGGGCAAACCGCGCGCGGCGGCCGCCTCGGGATGCTCGGCAACCGTGGCAGCCTGGATACCCCGTTCTC CACCACCAGCTACACGGCCCAGCGCATCGAGGATCAACAGGCCGTGACCCTGGCCGACGTGCTCAACGCGGACCCTTCGA TTCGTTTCACCGGCCAGACTGGCGGTGTCACCGACTCGTTCATGATTCGCGGCTTCCCGATCAATGAAGGCAACCTGTCG GAAGTCGCGTTCGACGGCGTGTATGGCGTTTCGCCGAACTACCATCTCTTTCCTGAATACATGGAGCGCGTCGAGGTCCT CAAGGGGCCGGCCGCGATGCTCTACGGGATGTCGCCCAACAGCGGTGTGGGGGGCGTGGTGAACCTCGTTCCCAAGCGGG CGGGTGCCACGGACCTGACACGCTTCACGCTCGACTATGCGTCGGACGCCCAAGTGGGCGGGGCCGTTGACTTGAGCCGT CGCTGGGGCAACGACAAGGAGTGGGGCGTTCGCTTCAATGGCTTGCACCGCCAGGGGCCCACGCCGCTGGACGACCAGAA GTCACGCAGCGAGGTGGCGGCCGTATCGCTTGACTATCACGGCGACCGTCTGCGGGCATCGCTCGACCTGATCGAGCAGT ACCAGTGGATCGATGCGCCGACGCGCCCGTTTCTGGTGGCTCCTGGCATCGAAGTGCCGGCGGCACCCGATGGTCGGCGT AACGTCACGCAGCCTTGGGGATGGTGGAAGTCCAACGACGTCTCGACGCTGTTGCGCGTCGAATATGACGTGGCGGACAA CGTCACTGTCTATGCCGATGCCGGCGGGACGCGGTCCGACGTGTCCCGCCTCTCGGACCAGACCCCGACAATCCTCAACG CGGCAGGCGATACTTCCGCCGCAGTGCAAAACTGGAGGTTTCAGATCAACCGGATGTCGTTCGATACCGGCGTGCGCGCG AAGTTCGACACCGGTCCGGTCAAGCATGCACTTGCGTTGCAGGGCAATCTCTATTCGGATCGTATTGCCAACGCCAACGT CGCGGGAACGCCGGTCCGCTCGAATATCTACCACCCGGTGGTGAGCCCCGAGCAGTCGATCGCGCCGCCGAGCTTTGTTC CAAAGGTGTCGGATTCCACGCTCTCCGGCGTAGCCGTGGTCGACACGGTCAGCACCATGGATGATCGCGTGGCCCTGACG CTTGGCTTGCGGTATCAACAGGTCGAGTCGAACAACTACAACACCGCAACCGGCGCAAAGTCGTCCTCGTATGACGAGAA CGCTGTGACGCCGCTGGCCGGCATCGTCTTCAGGCCATGGCGCAATGTTTCCTTCTATGCGAACTATGTCGAGGGGCTGA GCAAGGGTGATATCGCACCGGCCACTGCTTCGAATGCAGGTCAGGTATTCGCCCCCTACAAGACGAAGCAGCAAGAGGTC GGCGTCAAGGTCGATGCCGGATCCATCATGGCCACGCTGGCAGCCTTCCGCATGACCAAGCCGAGCGGCCAGTTGTTCGG CACGGTTTACGCTGTGGACAGCGAACAACGAAATCAGGGGCTGGAGCTGACTGTCTCTGGCGAAGTGGTGCGGCGTGTTC GGCTGCTGGGCGGCATTACCTGGCTGGACGGCAAGCTGACCAAGACCAATAGCACTGCGACGCAGGGCAACCGGCCGGTG GGCGTACCGGACTTCATGGCCAATCTTGGCGCCGAATGGGACCTGCCCTGGCTGCAGGGCCTGACGTTGACTGGCGCGCT CAACTACACGGGTCGCACCTACGTCAACCAGGCCAACACGCAGTCGGTGCCGTCGTGGACCACCGTCGACGTTGGGGCTC GCTACCGGACGAAGGTGTCGGGCAAGACCACCACGTTCCGGGCCACGGTCATCAATGCCTTCGACAAGCATTACTGGTCG GGCGTGGCTTCTTACAGCACGATCTCGCAGGGCGCACCGCGCACGTTCCTCGGCTCGGTGACGGTGGACTTCTGA
Upstream 100 bases:
>100_bases AGGGTGATGTGAAAAAAATCGAGATGAATTGAGGGGATTGGGCGACCTGTCCGGCTTGGATTGTAGGAACCCTCTTCAAT CCGCTCTGGACTTCGCAACC
Downstream 100 bases:
>100_bases TGCAGGGTCGATGCAGATAGGCTGCCGCCAGATCCTGGTTGGGATCATCCTCGCGACGGCTATCATCCTGGATGCCCGGG ACTGTCCGGCAGCTGGTTCC
Product: ferric siderophore receptor protein
Products: NA
Alternate protein names: OM2 [H]
Number of amino acids: Translated: 744; Mature: 743
Protein sequence:
>744_residues MSSHRSRHLSSRTSTQSACLPSPKPLAAALHQAMLCLAVGSGGMSINAIAQTSTDKAPETTLPAVTVSAVAASDSTDLPA AYAGGQTARGGRLGMLGNRGSLDTPFSTTSYTAQRIEDQQAVTLADVLNADPSIRFTGQTGGVTDSFMIRGFPINEGNLS EVAFDGVYGVSPNYHLFPEYMERVEVLKGPAAMLYGMSPNSGVGGVVNLVPKRAGATDLTRFTLDYASDAQVGGAVDLSR RWGNDKEWGVRFNGLHRQGPTPLDDQKSRSEVAAVSLDYHGDRLRASLDLIEQYQWIDAPTRPFLVAPGIEVPAAPDGRR NVTQPWGWWKSNDVSTLLRVEYDVADNVTVYADAGGTRSDVSRLSDQTPTILNAAGDTSAAVQNWRFQINRMSFDTGVRA KFDTGPVKHALALQGNLYSDRIANANVAGTPVRSNIYHPVVSPEQSIAPPSFVPKVSDSTLSGVAVVDTVSTMDDRVALT LGLRYQQVESNNYNTATGAKSSSYDENAVTPLAGIVFRPWRNVSFYANYVEGLSKGDIAPATASNAGQVFAPYKTKQQEV GVKVDAGSIMATLAAFRMTKPSGQLFGTVYAVDSEQRNQGLELTVSGEVVRRVRLLGGITWLDGKLTKTNSTATQGNRPV GVPDFMANLGAEWDLPWLQGLTLTGALNYTGRTYVNQANTQSVPSWTTVDVGARYRTKVSGKTTTFRATVINAFDKHYWS GVASYSTISQGAPRTFLGSVTVDF
Sequences:
>Translated_744_residues MSSHRSRHLSSRTSTQSACLPSPKPLAAALHQAMLCLAVGSGGMSINAIAQTSTDKAPETTLPAVTVSAVAASDSTDLPA AYAGGQTARGGRLGMLGNRGSLDTPFSTTSYTAQRIEDQQAVTLADVLNADPSIRFTGQTGGVTDSFMIRGFPINEGNLS EVAFDGVYGVSPNYHLFPEYMERVEVLKGPAAMLYGMSPNSGVGGVVNLVPKRAGATDLTRFTLDYASDAQVGGAVDLSR RWGNDKEWGVRFNGLHRQGPTPLDDQKSRSEVAAVSLDYHGDRLRASLDLIEQYQWIDAPTRPFLVAPGIEVPAAPDGRR NVTQPWGWWKSNDVSTLLRVEYDVADNVTVYADAGGTRSDVSRLSDQTPTILNAAGDTSAAVQNWRFQINRMSFDTGVRA KFDTGPVKHALALQGNLYSDRIANANVAGTPVRSNIYHPVVSPEQSIAPPSFVPKVSDSTLSGVAVVDTVSTMDDRVALT LGLRYQQVESNNYNTATGAKSSSYDENAVTPLAGIVFRPWRNVSFYANYVEGLSKGDIAPATASNAGQVFAPYKTKQQEV GVKVDAGSIMATLAAFRMTKPSGQLFGTVYAVDSEQRNQGLELTVSGEVVRRVRLLGGITWLDGKLTKTNSTATQGNRPV GVPDFMANLGAEWDLPWLQGLTLTGALNYTGRTYVNQANTQSVPSWTTVDVGARYRTKVSGKTTTFRATVINAFDKHYWS GVASYSTISQGAPRTFLGSVTVDF >Mature_743_residues SSHRSRHLSSRTSTQSACLPSPKPLAAALHQAMLCLAVGSGGMSINAIAQTSTDKAPETTLPAVTVSAVAASDSTDLPAA YAGGQTARGGRLGMLGNRGSLDTPFSTTSYTAQRIEDQQAVTLADVLNADPSIRFTGQTGGVTDSFMIRGFPINEGNLSE VAFDGVYGVSPNYHLFPEYMERVEVLKGPAAMLYGMSPNSGVGGVVNLVPKRAGATDLTRFTLDYASDAQVGGAVDLSRR WGNDKEWGVRFNGLHRQGPTPLDDQKSRSEVAAVSLDYHGDRLRASLDLIEQYQWIDAPTRPFLVAPGIEVPAAPDGRRN VTQPWGWWKSNDVSTLLRVEYDVADNVTVYADAGGTRSDVSRLSDQTPTILNAAGDTSAAVQNWRFQINRMSFDTGVRAK FDTGPVKHALALQGNLYSDRIANANVAGTPVRSNIYHPVVSPEQSIAPPSFVPKVSDSTLSGVAVVDTVSTMDDRVALTL GLRYQQVESNNYNTATGAKSSSYDENAVTPLAGIVFRPWRNVSFYANYVEGLSKGDIAPATASNAGQVFAPYKTKQQEVG VKVDAGSIMATLAAFRMTKPSGQLFGTVYAVDSEQRNQGLELTVSGEVVRRVRLLGGITWLDGKLTKTNSTATQGNRPVG VPDFMANLGAEWDLPWLQGLTLTGALNYTGRTYVNQANTQSVPSWTTVDVGARYRTKVSGKTTTFRATVINAFDKHYWSG VASYSTISQGAPRTFLGSVTVDF
Specific function: Anguibactin receptor, essential component of the iron uptake system of V.anguillarum [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=772, Percent_Identity=25.1295336787565, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1787344, Length=775, Percent_Identity=22.7096774193548, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 79706; Mature: 79575
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSHRSRHLSSRTSTQSACLPSPKPLAAALHQAMLCLAVGSGGMSINAIAQTSTDKAPET CCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHEEEEECCCCCEEEEEEECCCCCCCCC TLPAVTVSAVAASDSTDLPAAYAGGQTARGGRLGMLGNRGSLDTPFSTTSYTAQRIEDQQ CCCEEEEEEEECCCCCCCCCHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCH AVTLADVLNADPSIRFTGQTGGVTDSFMIRGFPINEGNLSEVAFDGVYGVSPNYHLFPEY HEEHHHHHCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCEEECCEECCCCCCEECHHH MERVEVLKGPAAMLYGMSPNSGVGGVVNLVPKRAGATDLTRFTLDYASDAQVGGAVDLSR HHHHHHHCCCCCEEEECCCCCCCCHHHEECCCCCCCCCEEEEEEECCCCCCCCCEEEHHH RWGNDKEWGVRFNGLHRQGPTPLDDQKSRSEVAAVSLDYHGDRLRASLDLIEQYQWIDAP HCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCC TRPFLVAPGIEVPAAPDGRRNVTQPWGWWKSNDVSTLLRVEYDVADNVTVYADAGGTRSD CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCHHH VSRLSDQTPTILNAAGDTSAAVQNWRFQINRMSFDTGVRAKFDTGPVKHALALQGNLYSD HHHHCCCCCEEEECCCCCHHHHHCEEEEEEEEEECCCCEEEECCCCCCEEEEECCCCCHH RIANANVAGTPVRSNIYHPVVSPEQSIAPPSFVPKVSDSTLSGVAVVDTVSTMDDRVALT HHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEEEHHHCCCEEEEE LGLRYQQVESNNYNTATGAKSSSYDENAVTPLAGIVFRPWRNVSFYANYVEGLSKGDIAP ECCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHEECCCCCCHHHHHHHCCCCCCCCCC ATASNAGQVFAPYKTKQQEVGVKVDAGSIMATLAAFRMTKPSGQLFGTVYAVDSEQRNQG CCCCCCCCEEECCCCCHHHCCEEEECHHHHHHHHHHHCCCCCCCEEEEEEEECCHHCCCC LELTVSGEVVRRVRLLGGITWLDGKLTKTNSTATQGNRPVGVPDFMANLGAEWDLPWLQG CEEEECHHHHHHHHHHCCEEEECCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCHHHCC LTLTGALNYTGRTYVNQANTQSVPSWTTVDVGARYRTKVSGKTTTFRATVINAFDKHYWS EEEEEEECCCCCEEEECCCCCCCCCEEEEECCCCEEEEECCCCEEEEEHHHHHHHHHHHH GVASYSTISQGAPRTFLGSVTVDF CHHHHHHHCCCCCCEEEEEEEECC >Mature Secondary Structure SSHRSRHLSSRTSTQSACLPSPKPLAAALHQAMLCLAVGSGGMSINAIAQTSTDKAPET CCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHEEEEECCCCCEEEEEEECCCCCCCCC TLPAVTVSAVAASDSTDLPAAYAGGQTARGGRLGMLGNRGSLDTPFSTTSYTAQRIEDQQ CCCEEEEEEEECCCCCCCCCHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCH AVTLADVLNADPSIRFTGQTGGVTDSFMIRGFPINEGNLSEVAFDGVYGVSPNYHLFPEY HEEHHHHHCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCEEECCEECCCCCCEECHHH MERVEVLKGPAAMLYGMSPNSGVGGVVNLVPKRAGATDLTRFTLDYASDAQVGGAVDLSR HHHHHHHCCCCCEEEECCCCCCCCHHHEECCCCCCCCCEEEEEEECCCCCCCCCEEEHHH RWGNDKEWGVRFNGLHRQGPTPLDDQKSRSEVAAVSLDYHGDRLRASLDLIEQYQWIDAP HCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCC TRPFLVAPGIEVPAAPDGRRNVTQPWGWWKSNDVSTLLRVEYDVADNVTVYADAGGTRSD CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCHHH VSRLSDQTPTILNAAGDTSAAVQNWRFQINRMSFDTGVRAKFDTGPVKHALALQGNLYSD HHHHCCCCCEEEECCCCCHHHHHCEEEEEEEEEECCCCEEEECCCCCCEEEEECCCCCHH RIANANVAGTPVRSNIYHPVVSPEQSIAPPSFVPKVSDSTLSGVAVVDTVSTMDDRVALT HHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEEEHHHCCCEEEEE LGLRYQQVESNNYNTATGAKSSSYDENAVTPLAGIVFRPWRNVSFYANYVEGLSKGDIAP ECCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHEECCCCCCHHHHHHHCCCCCCCCCC ATASNAGQVFAPYKTKQQEVGVKVDAGSIMATLAAFRMTKPSGQLFGTVYAVDSEQRNQG CCCCCCCCEEECCCCCHHHCCEEEECHHHHHHHHHHHCCCCCCCEEEEEEEECCHHCCCC LELTVSGEVVRRVRLLGGITWLDGKLTKTNSTATQGNRPVGVPDFMANLGAEWDLPWLQG CEEEECHHHHHHHHHHCCEEEECCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCHHHCC LTLTGALNYTGRTYVNQANTQSVPSWTTVDVGARYRTKVSGKTTTFRATVINAFDKHYWS EEEEEEECCCCCEEEECCCCCCCCCEEEEECCCCEEEEECCCCEEEEEHHHHHHHHHHHH GVASYSTISQGAPRTFLGSVTVDF CHHHHHHHCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2830268; 13129954; 2311935 [H]