| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is ffcA2 [H]
Identifier: 94313421
GI number: 94313421
Start: 1094838
End: 1097252
Strand: Reverse
Name: ffcA2 [H]
Synonym: Rmet_4496
Alternate gene names: 94313421
Gene position: 1097252-1094838 (Counterclockwise)
Preceding gene: 94313422
Following gene: 94313419
Centisome position: 42.53
GC content: 62.69
Gene sequence:
>2415_bases ATGCAGATAGGCTGCCGCCAGATCCTGGTTGGGATCATCCTCGCGACGGCTATCATCCTGGATGCCCGGGACTGTCCGGC AGCTGGTTCCGTGCAACGGGCGGCGGCCGAGGCTCGCACCTACTCGATACCACCCGGTCCGCTGGACGTGGTGCTCATAC AGTTCGCCACGGCATCGAAGATGGACCTGGCCTTCGATGCCGACGCGCTGCGGAAGCTGCACAGCGCGGGGCTGACGGGG CCGCATACGATTGCCGACGGCATCAGGATCCTGCTCCACGAGACTGGCTATTACGCCGTCGACCTGCGCGATGGAGGGTA TCTGATTCGCAAGACCTCTGCCGTCGACACGCAGGCGGAAGCCGCGCAGACATTGCCCACGGTGACTGTAGTCGGCCAAG CCTATCGCGCTGATGTGTCGCAGGGCACGGAAGCCGGTCATGGAATCGCCGGCACCGTGAATCTGGGAGCCTTGGGAAGC ATAGGCGGCATGGACTCGCCAGTCAGTACCCGGGTTTTCGACGCGCGCGAGATCCGGGACCAGCAGGCGTATAGCGTGGC CGATGTCGTGGATAACGATGCTTCGGTACGCTCGGTCAGCAAGCCGGGCGGCATTCTCGACGCCTTCACGATTCGCGGAT TTCCGTACAGCAACGGCAACTTCGGTGAAATTGCGTTCGATGGCGTCTACGGCATCGCGTCCAACTATCGCGTTGCGACG GGGTACGTCGAGCGGGTGGAGCTGATCAAGGGCCCCGCCACACTGCTCTACGGCATGTCACCTGGCGGCAGCGTGGGCGG CGCCATCAACATCGTGCCGAAGAGGGCAGGGGACGCGGACGTGACCGAGGCTGCTGCGGACTATGGCTCGTTGTCCCAGT TTGGCGCGAACATCGATGTGGGCAGGCGCCTCGGCGGCGACCGTGCGTTCGGCATTCGCTTCAATGGTGGCTACCGCGGT GGTGATACCGCTCTGGACAACCAGCATCGCGATGCCGGCTCAGGGGCGCTGGCTTTCGACTATCGCGGCAGTCAGTTGCG CGCGAGCCTCGATGTCATCGCCCAGTATGAGCGGATATCGGCGCCGTTCCGGCTGCTGCATATCGTTGCGGGTATCGACG TGCCAGCGGCGCCGGACGGCCATCGCAACATATCTCAGCCATGGGAGTCTTCGGAAATCCATGATGGCGCGACATTGGCG CGGGTTGCCTACGACGTTGACGAGAACACGCAGGTGTTCGCCCACGTCGGAGGTGGCCGCACACGCGTGGCGCGCGTTTT CGCCATCACGCCGACGATCATCAACGAGGCGGGAGACGTATCCGTATCCGATACGAACTACCGATTCGACGTGGCACGCA CTAGCGCCGAAGCCGGTATGCGATGGCGGGTTGCCATCGGCCCGATGACGCATCGTATTGCACTGTCGGCCAGCGGCTAC AGGGACCGGCTCAATCGCGGACTCGTGAGCTCTGCGATCACGTCGCTTACCAATCTCTACGATCCGGTGCCGCTACCTCC CCAGTCGATTGCCGATCCCGCCAGCGTGCCCAAGGTGTCGTCGACGTACCTGACAGGGTTGTCCCTAGTCGACACGGTAT CGACAAGGGATGAGTCCTTGCAGTTGACGGCCGGATTTCGCTATCAGCTCATTCGTTCCGACAACTTCAACCCGGAAGGC GTTGTGATCGAGCACTACGATGCGGGTGCGTTAGCCCCTCTGCTCGGTATCGTGTTTAAGCCGAACCAGGCCGTATCACT CTACGCGCACCGCATTGACGGACTCAGCAAAGGAGATGTCGCGCCGACAAGCGCGGCAAACGCAGGGGAGGTGATGGCAC CTTACCGTTCTACCCAGTACGAGGCCGGGGTCAGGCTCGCGCGGCAAGACCTTGAAGCGACCATCAGCGCTTTCCAGATC AGCAGGCCTGTTGGCGTGATGAGTGGGGCGAGTTTTGCGGTCGACGGCGAGCAGCGTAACCGCGGACTGGAACTTGGCGT ACGACACGAGTTGCTGCCCGGCGTGCGCGTCAACGCCGGTGCGATGTGGCTCGACGCGACGATCTCGGGGAGTCCAACGC TGTCTGGAAAGACCCCGGTCGGCGTGCCATCGTGGCAACTCAATCTTGGCGCGGAATGGGACGTCCGCCAGATTCCAGGC CTGACGCTGGTCACTGCCGTCTCTAGCAACGGTGCGCAGTATGTGGATGCGGCGAATACTCAGCTTGTGCCATCGTGGAT TCGCTGGGACCTGGGAATGCGATATCGCGTGAGTGGCGCGCGCTACCCCGCGACAGTGCGTCTTGCCATTCGCAACGTTC TGGGAAGACGAGGATGGGCCGCCGTTGATGCCTACGGAGGGCTGGCTCAAGCTGATCCACGGGTCGCATTGGTCTCAGTA ACTGCCAGCTTCTGA
Upstream 100 bases:
>100_bases AAGCATTACTGGTCGGGCGTGGCTTCTTACAGCACGATCTCGCAGGGCGCACCGCGCACGTTCCTCGGCTCGGTGACGGT GGACTTCTGATGCAGGGTCG
Downstream 100 bases:
>100_bases TTGTCAGTTACCAATGGGACATCAACCTAAGCCCACCCGCCAGGCTTGCCTAATGTCGCGACCATATGCAGCTTCCTCAA TCAAATAGTTGCCCCATCAT
Product: ferric siderophore receptor protein
Products: NA
Alternate protein names: OM2 [H]
Number of amino acids: Translated: 804; Mature: 804
Protein sequence:
>804_residues MQIGCRQILVGIILATAIILDARDCPAAGSVQRAAAEARTYSIPPGPLDVVLIQFATASKMDLAFDADALRKLHSAGLTG PHTIADGIRILLHETGYYAVDLRDGGYLIRKTSAVDTQAEAAQTLPTVTVVGQAYRADVSQGTEAGHGIAGTVNLGALGS IGGMDSPVSTRVFDAREIRDQQAYSVADVVDNDASVRSVSKPGGILDAFTIRGFPYSNGNFGEIAFDGVYGIASNYRVAT GYVERVELIKGPATLLYGMSPGGSVGGAINIVPKRAGDADVTEAAADYGSLSQFGANIDVGRRLGGDRAFGIRFNGGYRG GDTALDNQHRDAGSGALAFDYRGSQLRASLDVIAQYERISAPFRLLHIVAGIDVPAAPDGHRNISQPWESSEIHDGATLA RVAYDVDENTQVFAHVGGGRTRVARVFAITPTIINEAGDVSVSDTNYRFDVARTSAEAGMRWRVAIGPMTHRIALSASGY RDRLNRGLVSSAITSLTNLYDPVPLPPQSIADPASVPKVSSTYLTGLSLVDTVSTRDESLQLTAGFRYQLIRSDNFNPEG VVIEHYDAGALAPLLGIVFKPNQAVSLYAHRIDGLSKGDVAPTSAANAGEVMAPYRSTQYEAGVRLARQDLEATISAFQI SRPVGVMSGASFAVDGEQRNRGLELGVRHELLPGVRVNAGAMWLDATISGSPTLSGKTPVGVPSWQLNLGAEWDVRQIPG LTLVTAVSSNGAQYVDAANTQLVPSWIRWDLGMRYRVSGARYPATVRLAIRNVLGRRGWAAVDAYGGLAQADPRVALVSV TASF
Sequences:
>Translated_804_residues MQIGCRQILVGIILATAIILDARDCPAAGSVQRAAAEARTYSIPPGPLDVVLIQFATASKMDLAFDADALRKLHSAGLTG PHTIADGIRILLHETGYYAVDLRDGGYLIRKTSAVDTQAEAAQTLPTVTVVGQAYRADVSQGTEAGHGIAGTVNLGALGS IGGMDSPVSTRVFDAREIRDQQAYSVADVVDNDASVRSVSKPGGILDAFTIRGFPYSNGNFGEIAFDGVYGIASNYRVAT GYVERVELIKGPATLLYGMSPGGSVGGAINIVPKRAGDADVTEAAADYGSLSQFGANIDVGRRLGGDRAFGIRFNGGYRG GDTALDNQHRDAGSGALAFDYRGSQLRASLDVIAQYERISAPFRLLHIVAGIDVPAAPDGHRNISQPWESSEIHDGATLA RVAYDVDENTQVFAHVGGGRTRVARVFAITPTIINEAGDVSVSDTNYRFDVARTSAEAGMRWRVAIGPMTHRIALSASGY RDRLNRGLVSSAITSLTNLYDPVPLPPQSIADPASVPKVSSTYLTGLSLVDTVSTRDESLQLTAGFRYQLIRSDNFNPEG VVIEHYDAGALAPLLGIVFKPNQAVSLYAHRIDGLSKGDVAPTSAANAGEVMAPYRSTQYEAGVRLARQDLEATISAFQI SRPVGVMSGASFAVDGEQRNRGLELGVRHELLPGVRVNAGAMWLDATISGSPTLSGKTPVGVPSWQLNLGAEWDVRQIPG LTLVTAVSSNGAQYVDAANTQLVPSWIRWDLGMRYRVSGARYPATVRLAIRNVLGRRGWAAVDAYGGLAQADPRVALVSV TASF >Mature_804_residues MQIGCRQILVGIILATAIILDARDCPAAGSVQRAAAEARTYSIPPGPLDVVLIQFATASKMDLAFDADALRKLHSAGLTG PHTIADGIRILLHETGYYAVDLRDGGYLIRKTSAVDTQAEAAQTLPTVTVVGQAYRADVSQGTEAGHGIAGTVNLGALGS IGGMDSPVSTRVFDAREIRDQQAYSVADVVDNDASVRSVSKPGGILDAFTIRGFPYSNGNFGEIAFDGVYGIASNYRVAT GYVERVELIKGPATLLYGMSPGGSVGGAINIVPKRAGDADVTEAAADYGSLSQFGANIDVGRRLGGDRAFGIRFNGGYRG GDTALDNQHRDAGSGALAFDYRGSQLRASLDVIAQYERISAPFRLLHIVAGIDVPAAPDGHRNISQPWESSEIHDGATLA RVAYDVDENTQVFAHVGGGRTRVARVFAITPTIINEAGDVSVSDTNYRFDVARTSAEAGMRWRVAIGPMTHRIALSASGY RDRLNRGLVSSAITSLTNLYDPVPLPPQSIADPASVPKVSSTYLTGLSLVDTVSTRDESLQLTAGFRYQLIRSDNFNPEG VVIEHYDAGALAPLLGIVFKPNQAVSLYAHRIDGLSKGDVAPTSAANAGEVMAPYRSTQYEAGVRLARQDLEATISAFQI SRPVGVMSGASFAVDGEQRNRGLELGVRHELLPGVRVNAGAMWLDATISGSPTLSGKTPVGVPSWQLNLGAEWDVRQIPG LTLVTAVSSNGAQYVDAANTQLVPSWIRWDLGMRYRVSGARYPATVRLAIRNVLGRRGWAAVDAYGGLAQADPRVALVSV TASF
Specific function: Anguibactin receptor, essential component of the iron uptake system of V.anguillarum [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=369, Percent_Identity=26.0162601626016, Blast_Score=67, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 85071; Mature: 85071
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIGCRQILVGIILATAIILDARDCPAAGSVQRAAAEARTYSIPPGPLDVVLIQFATASK CCCCHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHCEECCCCCCCEEEEEEECCCCC MDLAFDADALRKLHSAGLTGPHTIADGIRILLHETGYYAVDLRDGGYLIRKTSAVDTQAE CEEEECHHHHHHHHHCCCCCCHHHHHHHEEEEEECCEEEEEEECCCEEEEECCCCCCHHH AAQTLPTVTVVGQAYRADVSQGTEAGHGIAGTVNLGALGSIGGMDSPVSTRVFDAREIRD HHHHCCEEEEECHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECHHHHHH QQAYSVADVVDNDASVRSVSKPGGILDAFTIRGFPYSNGNFGEIAFDGVYGIASNYRVAT HHHHHHHHHHCCCCHHEECCCCCCCEEEEEEECCCCCCCCCCCEEECCEEECCCCCEEEH GYVERVELIKGPATLLYGMSPGGSVGGAINIVPKRAGDADVTEAAADYGSLSQFGANIDV HHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCHHHHCCCCCH GRRLGGDRAFGIRFNGGYRGGDTALDNQHRDAGSGALAFDYRGSQLRASLDVIAQYERIS HHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHC APFRLLHIVAGIDVPAAPDGHRNISQPWESSEIHDGATLARVAYDVDENTQVFAHVGGGR CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCC TRVARVFAITPTIINEAGDVSVSDTNYRFDVARTSAEAGMRWRVAIGPMTHRIALSASGY EEEEEEEEECHHHHCCCCCEEECCCCEEEEEEECHHHCCCEEEEEECCCEEEEEEECCCH RDRLNRGLVSSAITSLTNLYDPVPLPPQSIADPASVPKVSSTYLTGLSLVDTVSTRDESL HHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCHHHHHCHHHHHHHCCCCCCE QLTAGFRYQLIRSDNFNPEGVVIEHYDAGALAPLLGIVFKPNQAVSLYAHRIDGLSKGDV EEEECCEEEEEECCCCCCCCEEEEECCCCHHHHHHHEEECCCCCEEHEEHHHCCCCCCCC APTSAANAGEVMAPYRSTQYEAGVRLARQDLEATISAFQISRPVGVMSGASFAVDGEQRN CCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEECCHHCC RGLELGVRHELLPGVRVNAGAMWLDATISGSPTLSGKTPVGVPSWQLNLGAEWDVRQIPG CCCEECCHHHHCCCCEECCCEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCHHHCCC LTLVTAVSSNGAQYVDAANTQLVPSWIRWDLGMRYRVSGARYPATVRLAIRNVLGRRGWA EEEEEEECCCCCEEEECCCCEECCHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCE AVDAYGGLAQADPRVALVSVTASF EEECCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MQIGCRQILVGIILATAIILDARDCPAAGSVQRAAAEARTYSIPPGPLDVVLIQFATASK CCCCHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHCEECCCCCCCEEEEEEECCCCC MDLAFDADALRKLHSAGLTGPHTIADGIRILLHETGYYAVDLRDGGYLIRKTSAVDTQAE CEEEECHHHHHHHHHCCCCCCHHHHHHHEEEEEECCEEEEEEECCCEEEEECCCCCCHHH AAQTLPTVTVVGQAYRADVSQGTEAGHGIAGTVNLGALGSIGGMDSPVSTRVFDAREIRD HHHHCCEEEEECHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECHHHHHH QQAYSVADVVDNDASVRSVSKPGGILDAFTIRGFPYSNGNFGEIAFDGVYGIASNYRVAT HHHHHHHHHHCCCCHHEECCCCCCCEEEEEEECCCCCCCCCCCEEECCEEECCCCCEEEH GYVERVELIKGPATLLYGMSPGGSVGGAINIVPKRAGDADVTEAAADYGSLSQFGANIDV HHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCHHHHCCCCCH GRRLGGDRAFGIRFNGGYRGGDTALDNQHRDAGSGALAFDYRGSQLRASLDVIAQYERIS HHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHC APFRLLHIVAGIDVPAAPDGHRNISQPWESSEIHDGATLARVAYDVDENTQVFAHVGGGR CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCC TRVARVFAITPTIINEAGDVSVSDTNYRFDVARTSAEAGMRWRVAIGPMTHRIALSASGY EEEEEEEEECHHHHCCCCCEEECCCCEEEEEEECHHHCCCEEEEEECCCEEEEEEECCCH RDRLNRGLVSSAITSLTNLYDPVPLPPQSIADPASVPKVSSTYLTGLSLVDTVSTRDESL HHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCHHHHHCHHHHHHHCCCCCCE QLTAGFRYQLIRSDNFNPEGVVIEHYDAGALAPLLGIVFKPNQAVSLYAHRIDGLSKGDV EEEECCEEEEEECCCCCCCCEEEEECCCCHHHHHHHEEECCCCCEEHEEHHHCCCCCCCC APTSAANAGEVMAPYRSTQYEAGVRLARQDLEATISAFQISRPVGVMSGASFAVDGEQRN CCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEECCHHCC RGLELGVRHELLPGVRVNAGAMWLDATISGSPTLSGKTPVGVPSWQLNLGAEWDVRQIPG CCCEECCHHHHCCCCEECCCEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCHHHCCC LTLVTAVSSNGAQYVDAANTQLVPSWIRWDLGMRYRVSGARYPATVRLAIRNVLGRRGWA EEEEEEECCCCCEEEECCCCEECCHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCE AVDAYGGLAQADPRVALVSVTASF EEECCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2830268; 13129954; 2311935 [H]