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The map label for this gene is shcR

Identifier: 94313329

GI number: 94313329

Start: 1000700

End: 1001299

Strand: Reverse

Name: shcR

Synonym: Rmet_4404

Alternate gene names: NA

Gene position: 1001299-1000700 (Counterclockwise)

Preceding gene: 94313331

Following gene: 94313328

Centisome position: 38.81

GC content: 63.67

Gene sequence:

>600_bases
ATGGTATCTTCCGGGTCCATGAGTGAAGCCCACCGCCGCCCCAAACAACCGCTCCTGATACGCGACCGCCTGCTCTCCGC
CACAATCGACCTGCTGGTCGAGGAAGGCATCGGCGCCGTCACCCTTAACTCTGTCGCCACACGCGCCGGTGTGTCGAAGG
GTGGCCTTCAGCATCACTTCTCAAGCAAGGAGGAACTGCTGGAAGCCCTGTCTGCCAAGGTGCTCCAGCATTTCACCGGC
CAGGTTGCCACGCTGGCCGAATCCGATACCGATGCCCAGGGACGCAATACACGGGCCTATCTGCGCGCCTCCGCCGATGG
TTTCGCCGAATCCGGCGAACGCGAGCTGTGGAAGGCCGCGATGATGCTCATCATGGCGCGTCCCGAGTTCCGCACGCCCT
ACCAGGAATGGGAATCCGGCAGCCTGAATACGGACCTCGCGCAATGCGAGGACCCCATCGGCCTGCTCCTGTGCCGGCTG
GCGGCTGACGGGCTCTGGCTGGCCGATCTTCTTGGCCATCGCGCCATTCCCCCGGCTCAACGGGCTGAGCTGGTTCGCCG
GCTCGAGCAATTAACGCACTGCCGTCCTCAACAAGCATGA

Upstream 100 bases:

>100_bases
AGATCCTCGGCCACCGGTCTTCCCCGGACTTTTTTCCTGGACGTTCATGGCGATGCGCAATCCATGGCAATCGTCCACGA
ATTGAAAACAATCCGTCCGG

Downstream 100 bases:

>100_bases
CCAGAAAAACAATCCCCGCATCGGAACTCGATGCTGCGATCGTCCGCGCACGCGACGCATTGCTGGACCGCCAGCACCCC
GACGGCCACTGGTGTTTCGA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Protein; Transcriptional Regulator TetR; Tetr Family Transcriptional Regulator; Transcriptional Regulatory Protein TetR Family

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MVSSGSMSEAHRRPKQPLLIRDRLLSATIDLLVEEGIGAVTLNSVATRAGVSKGGLQHHFSSKEELLEALSAKVLQHFTG
QVATLAESDTDAQGRNTRAYLRASADGFAESGERELWKAAMMLIMARPEFRTPYQEWESGSLNTDLAQCEDPIGLLLCRL
AADGLWLADLLGHRAIPPAQRAELVRRLEQLTHCRPQQA

Sequences:

>Translated_199_residues
MVSSGSMSEAHRRPKQPLLIRDRLLSATIDLLVEEGIGAVTLNSVATRAGVSKGGLQHHFSSKEELLEALSAKVLQHFTG
QVATLAESDTDAQGRNTRAYLRASADGFAESGERELWKAAMMLIMARPEFRTPYQEWESGSLNTDLAQCEDPIGLLLCRL
AADGLWLADLLGHRAIPPAQRAELVRRLEQLTHCRPQQA
>Mature_199_residues
MVSSGSMSEAHRRPKQPLLIRDRLLSATIDLLVEEGIGAVTLNSVATRAGVSKGGLQHHFSSKEELLEALSAKVLQHFTG
QVATLAESDTDAQGRNTRAYLRASADGFAESGERELWKAAMMLIMARPEFRTPYQEWESGSLNTDLAQCEDPIGLLLCRL
AADGLWLADLLGHRAIPPAQRAELVRRLEQLTHCRPQQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21853; Mature: 21853

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSSGSMSEAHRRPKQPLLIRDRLLSATIDLLVEEGIGAVTLNSVATRAGVSKGGLQHHF
CCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCHHHHC
SSKEELLEALSAKVLQHFTGQVATLAESDTDAQGRNTRAYLRASADGFAESGERELWKAA
CCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHEEECCCCHHHCCHHHHHHHH
MMLIMARPEFRTPYQEWESGSLNTDLAQCEDPIGLLLCRLAADGLWLADLLGHRAIPPAQ
HHHHHCCCCCCCCHHHHCCCCCCCCHHHHCCHHHHHHHHHHHCCHHHHHHHCCCCCCHHH
RAELVRRLEQLTHCRPQQA
HHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVSSGSMSEAHRRPKQPLLIRDRLLSATIDLLVEEGIGAVTLNSVATRAGVSKGGLQHHF
CCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCHHHHC
SSKEELLEALSAKVLQHFTGQVATLAESDTDAQGRNTRAYLRASADGFAESGERELWKAA
CCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHEEECCCCHHHCCHHHHHHHH
MMLIMARPEFRTPYQEWESGSLNTDLAQCEDPIGLLLCRLAADGLWLADLLGHRAIPPAQ
HHHHHCCCCCCCCHHHHCCCCCCCCHHHHCCHHHHHHHHHHHCCHHHHHHHCCCCCCHHH
RAELVRRLEQLTHCRPQQA
HHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA