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The map label for this gene is 94313279

Identifier: 94313279

GI number: 94313279

Start: 949212

End: 950063

Strand: Reverse

Name: 94313279

Synonym: Rmet_4354

Alternate gene names: NA

Gene position: 950063-949212 (Counterclockwise)

Preceding gene: 94313280

Following gene: 94313278

Centisome position: 36.82

GC content: 60.92

Gene sequence:

>852_bases
ATGCGGATAGACCAGTTGCGCCGGCATGGGCGGAACGGGCCAATCCGACAGGACTTCCACGAGTTCGCTTGCCACCAGAT
GATCCCGGACATCGAAGGCTGGAAATTAGGCCTGAAGGCCGGCTTTTTTTCGTTTCGATCCGCATCCGTTTGCGCTACGA
TCCGCACATCGACGTTCATCTGGGGCAGTAATCCATGGCGACATGTAACCTGCCCTGCGGTGATTTCTCCGTGTCCGGTT
GATCACCCCATGGCAAAGCCCATCCTGTCGGAAGACTCCATTCATGCCTTGGCGGATGCCCAGCCTGATGCCGTCTTCCT
CGTCGACAAGACCGGCATCATCCGGTACGTGAACCCCCGATGTCACGATTCGCTGGGCTTTGCGCAGTCCGACCTCATCG
GACAAACCATGCTCGAACTCGTGGTCCAGCGCGACCGCGATCGCACCATCAAGGAAGCCAGCGAGGTGCTGGCCGGCCAC
AAACGCACCGGCTTCGAGAACCGTTACCGGCACCAGGATGGAAGTGACATCCACTTCTCGTGGTCGGCACGCTGGCTGGA
ATCACATCAATTGCGACTTGGTACCGCGCGCGATGTCACAATCCTTCGGCAGCCAGCGTGCGCATATCTCCTGCCACCAG
ACCTTCTGGGGCTGCTCGACCCCTACGAGCAGGAGGTGTTTCTGCTGCTGCTGACATCCGCCACCGAGATGCAGATTGCC
AGACGCCTTGGCGTGGCGGCCGACGACATGCGCCGCCGGGTCGCCAGCGTCTATCGCAAGTTGGGCGTGCGCGGTCGCCT
GGGACTGACCAGTCTCGGCATGAGCGCGCTTCAGACACCGCTGAGTCCCTAG

Upstream 100 bases:

>100_bases
GCTGCGGAGAATGCGGGCCCCGCCAACTAGATATGCTGTGCCAACACGCTCGCCAGCCATTCACTGAAAATACCTGCGTT
CGGTGGGACAGCAATCGTCG

Downstream 100 bases:

>100_bases
TCAGGCAAAGCAGGATTAACAGCCGCGTGATGGGGCGTATATTGCGCCTGGAGGTCCGAGAGCCGGCATGCGAGGTAGAA
TCTCCCTCTTCCTGGTGCCG

Product: putative regulator, LuxR family

Products: NA

Alternate protein names: Diguanylate Cyclase With PAS/PAC And GAF Sensors; Sensory Box Protein; Multi-Sensor Signal Transduction Histidine Kinase; GGDEF Domain-Containing Protein; Lux R Family Regulator; Transcriptional Regulator LuxR Family; Sensory Box-Containing Diguanylate Cyclase; Intracellular Signaling Protein; Sensory Box GGDEF/EAL Domain-Containing Protein; Diguanylate Cyclase With Pas/Pac And Gaf Sensors; GGDEF Sensory Box Protein; Sensor/ Regulator Protein; PAS/PAC Sensor-Containing Diguanylate Cyclase

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MRIDQLRRHGRNGPIRQDFHEFACHQMIPDIEGWKLGLKAGFFSFRSASVCATIRTSTFIWGSNPWRHVTCPAVISPCPV
DHPMAKPILSEDSIHALADAQPDAVFLVDKTGIIRYVNPRCHDSLGFAQSDLIGQTMLELVVQRDRDRTIKEASEVLAGH
KRTGFENRYRHQDGSDIHFSWSARWLESHQLRLGTARDVTILRQPACAYLLPPDLLGLLDPYEQEVFLLLLTSATEMQIA
RRLGVAADDMRRRVASVYRKLGVRGRLGLTSLGMSALQTPLSP

Sequences:

>Translated_283_residues
MRIDQLRRHGRNGPIRQDFHEFACHQMIPDIEGWKLGLKAGFFSFRSASVCATIRTSTFIWGSNPWRHVTCPAVISPCPV
DHPMAKPILSEDSIHALADAQPDAVFLVDKTGIIRYVNPRCHDSLGFAQSDLIGQTMLELVVQRDRDRTIKEASEVLAGH
KRTGFENRYRHQDGSDIHFSWSARWLESHQLRLGTARDVTILRQPACAYLLPPDLLGLLDPYEQEVFLLLLTSATEMQIA
RRLGVAADDMRRRVASVYRKLGVRGRLGLTSLGMSALQTPLSP
>Mature_283_residues
MRIDQLRRHGRNGPIRQDFHEFACHQMIPDIEGWKLGLKAGFFSFRSASVCATIRTSTFIWGSNPWRHVTCPAVISPCPV
DHPMAKPILSEDSIHALADAQPDAVFLVDKTGIIRYVNPRCHDSLGFAQSDLIGQTMLELVVQRDRDRTIKEASEVLAGH
KRTGFENRYRHQDGSDIHFSWSARWLESHQLRLGTARDVTILRQPACAYLLPPDLLGLLDPYEQEVFLLLLTSATEMQIA
RRLGVAADDMRRRVASVYRKLGVRGRLGLTSLGMSALQTPLSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31877; Mature: 31877

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIDQLRRHGRNGPIRQDFHEFACHQMIPDIEGWKLGLKAGFFSFRSASVCATIRTSTFI
CCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCHHEEEEECEEEE
WGSNPWRHVTCPAVISPCPVDHPMAKPILSEDSIHALADAQPDAVFLVDKTGIIRYVNPR
ECCCCCCEEECCHHCCCCCCCCCHHCCCCCCCCHHHHHCCCCCEEEEEECCCEEEECCCC
CHDSLGFAQSDLIGQTMLELVVQRDRDRTIKEASEVLAGHKRTGFENRYRHQDGSDIHFS
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCEEEEE
WSARWLESHQLRLGTARDVTILRQPACAYLLPPDLLGLLDPYEQEVFLLLLTSATEMQIA
ECHHHHHCCCEECCCCCCEEEEECCCCCEECCHHHHHHCCCCHHHEEEEEECCCHHHHHH
RRLGVAADDMRRRVASVYRKLGVRGRLGLTSLGMSALQTPLSP
HHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHHHCCCCC
>Mature Secondary Structure
MRIDQLRRHGRNGPIRQDFHEFACHQMIPDIEGWKLGLKAGFFSFRSASVCATIRTSTFI
CCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCHHEEEEECEEEE
WGSNPWRHVTCPAVISPCPVDHPMAKPILSEDSIHALADAQPDAVFLVDKTGIIRYVNPR
ECCCCCCEEECCHHCCCCCCCCCHHCCCCCCCCHHHHHCCCCCEEEEEECCCEEEECCCC
CHDSLGFAQSDLIGQTMLELVVQRDRDRTIKEASEVLAGHKRTGFENRYRHQDGSDIHFS
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCEEEEE
WSARWLESHQLRLGTARDVTILRQPACAYLLPPDLLGLLDPYEQEVFLLLLTSATEMQIA
ECHHHHHCCCEECCCCCCEEEEECCCCCEECCHHHHHHCCCCHHHEEEEEECCCHHHHHH
RRLGVAADDMRRRVASVYRKLGVRGRLGLTSLGMSALQTPLSP
HHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA