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The map label for this gene is ntaR [H]

Identifier: 94313278

GI number: 94313278

Start: 948272

End: 949144

Strand: Reverse

Name: ntaR [H]

Synonym: Rmet_4353

Alternate gene names: 94313278

Gene position: 949144-948272 (Counterclockwise)

Preceding gene: 94313279

Following gene: 94313277

Centisome position: 36.79

GC content: 64.38

Gene sequence:

>873_bases
ATGCGAGGTAGAATCTCCCTCTTCCTGGTGCCGTCTCTGTCCATTCCCGCTCCAGCCGTGCTGGCAGGAACGCGCGACGG
CAACCGGATGGCCCTGGGTTGTCTCGCATCATTAACCAGTAGATTGAATAGCGAACTTCGCCGCCTGCGGCGGAGTTACA
GATCCCCACTTCACGACTCCATGCTTCCTACGGACCTCGTCGCCAGCTCCGACGGCGATCAAAACGCCTCGCTGCCACGC
TCCGAGCGCGCCTATCAACAGTTGCGATCAGCCATCCAGGCAGGTCAACTGCCGCCCGGCACCCGCCTGAGAGAAGTCGA
ACTCGCGGAATCCCTGGGCCTGTCGCGCACGCCGGTGCGCGAGGCGCTGTCGCGGCTCGAGTCAGAAGGGCTTGTTGTAA
ACGAGCCCAATCGGGGCATGATCGTGACGCGCCTCGACGCCAGCATGGTCAGCGAACTCTACGTCATGCGAGAGGTGCTC
GAGTCCACCGCCGCGGCGCTGGCCGCACGCCACGCCACCGACGTGGAGATCTCGCTGCTGCGCGATATCGTCGAACGCGA
CCTCTCGTTCGCCGAGGATCCCGACAAGCTGGCGATGAACAACCGCCTGTTCCACGAGACGCTGCACCGCTGCGCCCACA
ATCGCTATCTGCTGAAGACGCTCCGCTCGCTGCACGAATCCATGGCACTGCTAGGGCGCTCCACGCTGGCCGTCCCAGGC
CGCGCGCGCGGATCGTATGAGGAACACATGGCGCTGGTCCAGGCGCTGGAAGCCCGTGACCCCGAGCAGGCCGAGCAGAT
CGCGCGGCGCCATATCCAGCAAGCCTACAAGGTCCGGCTGTCGCTCTGGATCGAAGAGCAATCTGGCACCTGA

Upstream 100 bases:

>100_bases
ATGAGCGCGCTTCAGACACCGCTGAGTCCCTAGTCAGGCAAAGCAGGATTAACAGCCGCGTGATGGGGCGTATATTGCGC
CTGGAGGTCCGAGAGCCGGC

Downstream 100 bases:

>100_bases
AGTCGCATCCGGCGCGCAGAGTAACGGCAAGATCAAGAACAATAGCCCCGTCACGAAACCGTGACGGGGCTATTGTTTTA
CGCCCTCGAAAAGTGTGTTC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MRGRISLFLVPSLSIPAPAVLAGTRDGNRMALGCLASLTSRLNSELRRLRRSYRSPLHDSMLPTDLVASSDGDQNASLPR
SERAYQQLRSAIQAGQLPPGTRLREVELAESLGLSRTPVREALSRLESEGLVVNEPNRGMIVTRLDASMVSELYVMREVL
ESTAAALAARHATDVEISLLRDIVERDLSFAEDPDKLAMNNRLFHETLHRCAHNRYLLKTLRSLHESMALLGRSTLAVPG
RARGSYEEHMALVQALEARDPEQAEQIARRHIQQAYKVRLSLWIEEQSGT

Sequences:

>Translated_290_residues
MRGRISLFLVPSLSIPAPAVLAGTRDGNRMALGCLASLTSRLNSELRRLRRSYRSPLHDSMLPTDLVASSDGDQNASLPR
SERAYQQLRSAIQAGQLPPGTRLREVELAESLGLSRTPVREALSRLESEGLVVNEPNRGMIVTRLDASMVSELYVMREVL
ESTAAALAARHATDVEISLLRDIVERDLSFAEDPDKLAMNNRLFHETLHRCAHNRYLLKTLRSLHESMALLGRSTLAVPG
RARGSYEEHMALVQALEARDPEQAEQIARRHIQQAYKVRLSLWIEEQSGT
>Mature_290_residues
MRGRISLFLVPSLSIPAPAVLAGTRDGNRMALGCLASLTSRLNSELRRLRRSYRSPLHDSMLPTDLVASSDGDQNASLPR
SERAYQQLRSAIQAGQLPPGTRLREVELAESLGLSRTPVREALSRLESEGLVVNEPNRGMIVTRLDASMVSELYVMREVL
ESTAAALAARHATDVEISLLRDIVERDLSFAEDPDKLAMNNRLFHETLHRCAHNRYLLKTLRSLHESMALLGRSTLAVPG
RARGSYEEHMALVQALEARDPEQAEQIARRHIQQAYKVRLSLWIEEQSGT

Specific function: Probable regulator for the expression of the NTA monooxygenase subunits [H]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787821, Length=209, Percent_Identity=25.8373205741627, Blast_Score=62, Evalue=6e-11,
Organism=Escherichia coli, GI87081914, Length=179, Percent_Identity=30.7262569832402, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 32349; Mature: 32349

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGRISLFLVPSLSIPAPAVLAGTRDGNRMALGCLASLTSRLNSELRRLRRSYRSPLHDS
CCCCEEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHC
MLPTDLVASSDGDQNASLPRSERAYQQLRSAIQAGQLPPGTRLREVELAESLGLSRTPVR
CCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHH
EALSRLESEGLVVNEPNRGMIVTRLDASMVSELYVMREVLESTAAALAARHATDVEISLL
HHHHHHHHCCCEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
RDIVERDLSFAEDPDKLAMNNRLFHETLHRCAHNRYLLKTLRSLHESMALLGRSTLAVPG
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RARGSYEEHMALVQALEARDPEQAEQIARRHIQQAYKVRLSLWIEEQSGT
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCC
>Mature Secondary Structure
MRGRISLFLVPSLSIPAPAVLAGTRDGNRMALGCLASLTSRLNSELRRLRRSYRSPLHDS
CCCCEEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHC
MLPTDLVASSDGDQNASLPRSERAYQQLRSAIQAGQLPPGTRLREVELAESLGLSRTPVR
CCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHH
EALSRLESEGLVVNEPNRGMIVTRLDASMVSELYVMREVLESTAAALAARHATDVEISLL
HHHHHHHHCCCEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
RDIVERDLSFAEDPDKLAMNNRLFHETLHRCAHNRYLLKTLRSLHESMALLGRSTLAVPG
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RARGSYEEHMALVQALEARDPEQAEQIARRHIQQAYKVRLSLWIEEQSGT
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA