| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94313223
Identifier: 94313223
GI number: 94313223
Start: 889997
End: 891172
Strand: Reverse
Name: 94313223
Synonym: Rmet_4297
Alternate gene names: NA
Gene position: 891172-889997 (Counterclockwise)
Preceding gene: 94313225
Following gene: 94313221
Centisome position: 34.54
GC content: 64.46
Gene sequence:
>1176_bases ATGGCCGACGGCCAGTTGCGCGGCAGCCGCGAAGCCAGGAAGCCCACCACGCGCTGGATCAAGAACCCGGCTTGGGATCT CGTTTGGGTACTGAATGCACTGTGGTTAGCCCCCCTGGTCCTTCTGCTGGCTTGGGGTCATGACGACGTGCGCGCCAGCC CGGTGGATGGGCTGTTCTTTGCCTTTGCGGTACCTCTATGGTTCGGCCACCGCGTCTCGTCGGCCTGGTTGGCCTACGCA ACCCCGGCCTACCGCCCCCTGCTCACGACGCAGCGGCTACGCTTCGTCGTGGCCCCACTGACCATCGCCGTGGCCTGCTT CACCCTGCTTCTGACGCCCGAGAGCGTGCTGCCGATACCGGTGACTGAGCGCGTGGTGTGGTTGGCCGTCCTGGACTACC TGCTGGTGAGTCACCATTTCGCCGCGCAGCATTTTGGGCTACTTAGCCTGTACCGCTCCCGCGCGGGACGAGCATCCGAC GCGGTCACGCGACGGCTTGATCGGTGGTTCGCGCTTGTCGTGGGCGGTGGCTTCGTCGTATTGGCAGACGCCTTGGCTGG ATCGATAGCTTTCCAGGATCGCTGGATCAACCCGCTGCCAGGAGGGATCTGGTTGGACGTGTTCGCACGCGCACTGCACG ATGGCGGCATTGCCTTCGTCGCAATCCTGACTGGCCTGATGCTATATGTCGAACTGCGCTCGCAGCGTACATCGTTGCCG CGCGTGGCCTACATCCTAAGCGTCTCGTCTATGGTGCTCGTCGCCTTCCTCGCGCGCGACCCCTTCCTGTTCATCGTACT GTGGAGCGTGCAGCATTGGAGCGCGGCAATGGGACTCACCTCGCTCGCGGCTTCCGGTGGGGCTCAGTCGCCTGGCACGC ACTGGCTGCAACTGCTGGCGCCCATCAATCGACGCGGCTGGGCAGTGCTGCTCGTGCTCGCCGTTGTCTCAACCTTGCTG CTACCGCTGCTGGAAGTGGAGGCCGTGACCGACGAATACGCCTACGCCGATCGCATCTTCGGTGAGGCGGCGCGCTGGCT GCGCTCCTCGCCTTACGTGCCGGCGCTGCTGGCACTGGGCTTCGCGACTGGCTTCATCCATTACTTGCTGGATCGCGCTG TTTTCCGCTTCTCCTCGCCCGACGTCAGGCAGGCCGCCCGTGGGCTGATCGAATGA
Upstream 100 bases:
>100_bases CCCGCGAGCGTCGCCGAAGACAGGAAAGTATTTCTCCTCCCGATCCATATGCACATATGCTGAAACCACCATCAGGCAAG CAACTTCCAGGAGTTCCACC
Downstream 100 bases:
>100_bases TGATGCCGCAATCGGTCACTCATGGCTAGTTTGCGCCCGTCGCCAAACCTTGGCCAGTTGACCGGTTGAATCCAAAGCCA GTTTGCGCCATTGCACGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MADGQLRGSREARKPTTRWIKNPAWDLVWVLNALWLAPLVLLLAWGHDDVRASPVDGLFFAFAVPLWFGHRVSSAWLAYA TPAYRPLLTTQRLRFVVAPLTIAVACFTLLLTPESVLPIPVTERVVWLAVLDYLLVSHHFAAQHFGLLSLYRSRAGRASD AVTRRLDRWFALVVGGGFVVLADALAGSIAFQDRWINPLPGGIWLDVFARALHDGGIAFVAILTGLMLYVELRSQRTSLP RVAYILSVSSMVLVAFLARDPFLFIVLWSVQHWSAAMGLTSLAASGGAQSPGTHWLQLLAPINRRGWAVLLVLAVVSTLL LPLLEVEAVTDEYAYADRIFGEAARWLRSSPYVPALLALGFATGFIHYLLDRAVFRFSSPDVRQAARGLIE
Sequences:
>Translated_391_residues MADGQLRGSREARKPTTRWIKNPAWDLVWVLNALWLAPLVLLLAWGHDDVRASPVDGLFFAFAVPLWFGHRVSSAWLAYA TPAYRPLLTTQRLRFVVAPLTIAVACFTLLLTPESVLPIPVTERVVWLAVLDYLLVSHHFAAQHFGLLSLYRSRAGRASD AVTRRLDRWFALVVGGGFVVLADALAGSIAFQDRWINPLPGGIWLDVFARALHDGGIAFVAILTGLMLYVELRSQRTSLP RVAYILSVSSMVLVAFLARDPFLFIVLWSVQHWSAAMGLTSLAASGGAQSPGTHWLQLLAPINRRGWAVLLVLAVVSTLL LPLLEVEAVTDEYAYADRIFGEAARWLRSSPYVPALLALGFATGFIHYLLDRAVFRFSSPDVRQAARGLIE >Mature_390_residues ADGQLRGSREARKPTTRWIKNPAWDLVWVLNALWLAPLVLLLAWGHDDVRASPVDGLFFAFAVPLWFGHRVSSAWLAYAT PAYRPLLTTQRLRFVVAPLTIAVACFTLLLTPESVLPIPVTERVVWLAVLDYLLVSHHFAAQHFGLLSLYRSRAGRASDA VTRRLDRWFALVVGGGFVVLADALAGSIAFQDRWINPLPGGIWLDVFARALHDGGIAFVAILTGLMLYVELRSQRTSLPR VAYILSVSSMVLVAFLARDPFLFIVLWSVQHWSAAMGLTSLAASGGAQSPGTHWLQLLAPINRRGWAVLLVLAVVSTLLL PLLEVEAVTDEYAYADRIFGEAARWLRSSPYVPALLALGFATGFIHYLLDRAVFRFSSPDVRQAARGLIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43230; Mature: 43099
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADGQLRGSREARKPTTRWIKNPAWDLVWVLNALWLAPLVLLLAWGHDDVRASPVDGLFF CCCCCCCCCCHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH AFAVPLWFGHRVSSAWLAYATPAYRPLLTTQRLRFVVAPLTIAVACFTLLLTPESVLPIP HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VTERVVWLAVLDYLLVSHHFAAQHFGLLSLYRSRAGRASDAVTRRLDRWFALVVGGGFVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHH LADALAGSIAFQDRWINPLPGGIWLDVFARALHDGGIAFVAILTGLMLYVELRSQRTSLP HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC RVAYILSVSSMVLVAFLARDPFLFIVLWSVQHWSAAMGLTSLAASGGAQSPGTHWLQLLA HHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH PINRRGWAVLLVLAVVSTLLLPLLEVEAVTDEYAYADRIFGEAARWLRSSPYVPALLALG HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH FATGFIHYLLDRAVFRFSSPDVRQAARGLIE HHHHHHHHHHHHHHHHCCCCCHHHHHHCCCC >Mature Secondary Structure ADGQLRGSREARKPTTRWIKNPAWDLVWVLNALWLAPLVLLLAWGHDDVRASPVDGLFF CCCCCCCCCHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH AFAVPLWFGHRVSSAWLAYATPAYRPLLTTQRLRFVVAPLTIAVACFTLLLTPESVLPIP HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VTERVVWLAVLDYLLVSHHFAAQHFGLLSLYRSRAGRASDAVTRRLDRWFALVVGGGFVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHH LADALAGSIAFQDRWINPLPGGIWLDVFARALHDGGIAFVAILTGLMLYVELRSQRTSLP HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC RVAYILSVSSMVLVAFLARDPFLFIVLWSVQHWSAAMGLTSLAASGGAQSPGTHWLQLLA HHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH PINRRGWAVLLVLAVVSTLLLPLLEVEAVTDEYAYADRIFGEAARWLRSSPYVPALLALG HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH FATGFIHYLLDRAVFRFSSPDVRQAARGLIE HHHHHHHHHHHHHHHHCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA