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The map label for this gene is yphA [H]

Identifier: 94313221

GI number: 94313221

Start: 888319

End: 888741

Strand: Reverse

Name: yphA [H]

Synonym: Rmet_4295

Alternate gene names: 94313221

Gene position: 888741-888319 (Counterclockwise)

Preceding gene: 94313223

Following gene: 94313220

Centisome position: 34.45

GC content: 62.41

Gene sequence:

>423_bases
ATGAACAAGAATCTCGCAATTCCGAAAACGGTGATCCCGGCCATCGGCCGAATCCTCATCGCTGCCCTCTTCCTCGTCAG
CGGTCTGGGCAAGCTAATGGCTCCGGGCGCAACGATGTCCTACATAGCGTCCCTGGGATTGCCCGCACCGCTGCTGGGCT
ATCTGGGCGCCCTGATCCTTGAACTGGCAGGTGCAGTGCTGCTGGTTGCTGGTTATCGCACGCGCATCGTCGCCTTGTTG
TTGGCGACCTATGCGGTGGTGACGGCGCTGATCTTCCACCACGCGCTGGCCGACCAGAATCAGATGTTCCACTTCCTGAA
GAACTTCGCCATGGCTGGAGGACTGCTGCAGGTAGCAGCCTTCGGCAGCGGGGCATTCGGTCTGGACGCGCGCCGCGCGC
CGGCCAGCCAGGCCATCGCCTGA

Upstream 100 bases:

>100_bases
ATTTCGCCCGCCTAATCTTCTTCAGCAACGGGGCACAACCCCAGCAAGCTTCTGATCCACGCAACCCATCTTTCATCCGC
CTTCCTAAAGGATGCTCGTC

Downstream 100 bases:

>100_bases
CCAATGCACAGACAAGGGAAACCATCATGAGCATCGCCTCAGAGCTGTTGCAGCTTCACCTCCGGTGGCTGGTCGACGAC
AACCAGCAGTGGCAAGAGCT

Product: DoxX, putative exported protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNKNLAIPKTVIPAIGRILIAALFLVSGLGKLMAPGATMSYIASLGLPAPLLGYLGALILELAGAVLLVAGYRTRIVALL
LATYAVVTALIFHHALADQNQMFHFLKNFAMAGGLLQVAAFGSGAFGLDARRAPASQAIA

Sequences:

>Translated_140_residues
MNKNLAIPKTVIPAIGRILIAALFLVSGLGKLMAPGATMSYIASLGLPAPLLGYLGALILELAGAVLLVAGYRTRIVALL
LATYAVVTALIFHHALADQNQMFHFLKNFAMAGGLLQVAAFGSGAFGLDARRAPASQAIA
>Mature_140_residues
MNKNLAIPKTVIPAIGRILIAALFLVSGLGKLMAPGATMSYIASLGLPAPLLGYLGALILELAGAVLLVAGYRTRIVALL
LATYAVVTALIFHHALADQNQMFHFLKNFAMAGGLLQVAAFGSGAFGLDARRAPASQAIA

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI145693171, Length=128, Percent_Identity=37.5, Blast_Score=77, Evalue=4e-16,
Organism=Escherichia coli, GI87082210, Length=115, Percent_Identity=33.0434782608696, Blast_Score=70, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 14457; Mature: 14457

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKNLAIPKTVIPAIGRILIAALFLVSGLGKLMAPGATMSYIASLGLPAPLLGYLGALIL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHH
ELAGAVLLVAGYRTRIVALLLATYAVVTALIFHHALADQNQMFHFLKNFAMAGGLLQVAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
FGSGAFGLDARRAPASQAIA
HCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNKNLAIPKTVIPAIGRILIAALFLVSGLGKLMAPGATMSYIASLGLPAPLLGYLGALIL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHH
ELAGAVLLVAGYRTRIVALLLATYAVVTALIFHHALADQNQMFHFLKNFAMAGGLLQVAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
FGSGAFGLDARRAPASQAIA
HCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]