| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is bug
Identifier: 94313140
GI number: 94313140
Start: 797257
End: 798237
Strand: Direct
Name: bug
Synonym: Rmet_4213
Alternate gene names: NA
Gene position: 797257-798237 (Clockwise)
Preceding gene: 94313139
Following gene: 94313141
Centisome position: 30.9
GC content: 64.12
Gene sequence:
>981_bases ATGCATCGATTCGCCCCCGTTCGATGGCTGGCTACTGCATTGGCCGCCACTGGTTTCACGTTCGCCGCGCAGGCGTCGGC GCAAGGCACTCCGTATCCGGCCAAGCCCGTGCGTGTGGTAGTGGCCTTCACCGCAGGCGGCACTACCGACATGCTGGCGC GTAGCGTCAGCCAGCAACTTGCCCAGCGTTTCAAGCAATCCTTCGTGGTGGACAACCGTCCCGGCGCGGGCGGAAATATC GGCACCGAGTACGTTGTCCGATCGCCGGCCGATGGCTACACCCTGCTGGTCAACTCGGTGGGGCCGATCTCGATCAACCA GACGCTCTACAAGCGCCTGAACTACGACCCGCTGGCCGATCTGGTGCCGGTGGTGCAGATCGCCGACGTGCCGAACGTGC TCGTCGTGCCGGCCGCGCTGCCGGTAAAGAACTTCGACGAGTTCGTGGCCTATGCCAAGGCGAACTCGGGCAAGCTCAAC TACAGCTCGACCGGGGTGGGGACGTCGTCGCATCTGTCGGGCTTCATGTTCAGTGAACGCATCGGTGCCCAGGCCACTCA TGTGCCTTACAAGGGCGCCGATGCGCTGAACGACCTGCTCTCGGGGCGCGTCCAGTTCATGTTCGCCACGATTCCATCGG TGATCTCGCAGATCCAGGCTGGCAAGCTGCGTGCGCTGGCGGTGACTAGTGCGAAGCGTTCCCGCTCGCTGCCGGATCTG CCGACGGTGGCGGAGAAGGGCTTCCCCGGTTTCGAGGCTGGCTCGTGGTTCGGCTTCTTCGCACCGAAGGGCACGCCGGC CGAGGTCGTCACCCGGGTCAATCAGGCCGTGAATGAGATCCTGCCGTCGCTGCAGGCGCAGATGGTTCGTGAAGGCGCCG ATCCGGCCGGCGGCTCGCCGCAGCAGTTCGGTGATTTCACGCGCAAGGAATACGAGAAATGGAAGGTCGTGGTCAAGGCC TCCGGTGCCACTGTCGATTGA
Upstream 100 bases:
>100_bases CCGTGCCCCGAATCGCGGGTCCCGACTGGTGGCATGGCGCCGGGCGCGCGCAAAACCGTCCCGGTGCGCAGAAGAACTAT ATAAACAAGAGAGACAAGAC
Downstream 100 bases:
>100_bases AATTCAGACATGTCTCAAACTCAGCCGAAGTCTCAAGTTTCCGTCCAGCCATTGCGCATCCTGTTGTCCGAACCGACGCT GAGGGAGCATCGCGCCGCGA
Product: extra-cytoplasmic solute receptor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MHRFAPVRWLATALAATGFTFAAQASAQGTPYPAKPVRVVVAFTAGGTTDMLARSVSQQLAQRFKQSFVVDNRPGAGGNI GTEYVVRSPADGYTLLVNSVGPISINQTLYKRLNYDPLADLVPVVQIADVPNVLVVPAALPVKNFDEFVAYAKANSGKLN YSSTGVGTSSHLSGFMFSERIGAQATHVPYKGADALNDLLSGRVQFMFATIPSVISQIQAGKLRALAVTSAKRSRSLPDL PTVAEKGFPGFEAGSWFGFFAPKGTPAEVVTRVNQAVNEILPSLQAQMVREGADPAGGSPQQFGDFTRKEYEKWKVVVKA SGATVD
Sequences:
>Translated_326_residues MHRFAPVRWLATALAATGFTFAAQASAQGTPYPAKPVRVVVAFTAGGTTDMLARSVSQQLAQRFKQSFVVDNRPGAGGNI GTEYVVRSPADGYTLLVNSVGPISINQTLYKRLNYDPLADLVPVVQIADVPNVLVVPAALPVKNFDEFVAYAKANSGKLN YSSTGVGTSSHLSGFMFSERIGAQATHVPYKGADALNDLLSGRVQFMFATIPSVISQIQAGKLRALAVTSAKRSRSLPDL PTVAEKGFPGFEAGSWFGFFAPKGTPAEVVTRVNQAVNEILPSLQAQMVREGADPAGGSPQQFGDFTRKEYEKWKVVVKA SGATVD >Mature_326_residues MHRFAPVRWLATALAATGFTFAAQASAQGTPYPAKPVRVVVAFTAGGTTDMLARSVSQQLAQRFKQSFVVDNRPGAGGNI GTEYVVRSPADGYTLLVNSVGPISINQTLYKRLNYDPLADLVPVVQIADVPNVLVVPAALPVKNFDEFVAYAKANSGKLN YSSTGVGTSSHLSGFMFSERIGAQATHVPYKGADALNDLLSGRVQFMFATIPSVISQIQAGKLRALAVTSAKRSRSLPDL PTVAEKGFPGFEAGSWFGFFAPKGTPAEVVTRVNQAVNEILPSLQAQMVREGADPAGGSPQQFGDFTRKEYEKWKVVVKA SGATVD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34687; Mature: 34687
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRFAPVRWLATALAATGFTFAAQASAQGTPYPAKPVRVVVAFTAGGTTDMLARSVSQQL CCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHH AQRFKQSFVVDNRPGAGGNIGTEYVVRSPADGYTLLVNSVGPISINQTLYKRLNYDPLAD HHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHCCCCCHHH LVPVVQIADVPNVLVVPAALPVKNFDEFVAYAKANSGKLNYSSTGVGTSSHLSGFMFSER HHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHH IGAQATHVPYKGADALNDLLSGRVQFMFATIPSVISQIQAGKLRALAVTSAKRSRSLPDL HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHCCCCCC PTVAEKGFPGFEAGSWFGFFAPKGTPAEVVTRVNQAVNEILPSLQAQMVREGADPAGGSP CHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH QQFGDFTRKEYEKWKVVVKASGATVD HHHHHHHHHHHHHEEEEEEECCCCCC >Mature Secondary Structure MHRFAPVRWLATALAATGFTFAAQASAQGTPYPAKPVRVVVAFTAGGTTDMLARSVSQQL CCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHH AQRFKQSFVVDNRPGAGGNIGTEYVVRSPADGYTLLVNSVGPISINQTLYKRLNYDPLAD HHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHCCCCCHHH LVPVVQIADVPNVLVVPAALPVKNFDEFVAYAKANSGKLNYSSTGVGTSSHLSGFMFSER HHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHH IGAQATHVPYKGADALNDLLSGRVQFMFATIPSVISQIQAGKLRALAVTSAKRSRSLPDL HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHCCCCCC PTVAEKGFPGFEAGSWFGFFAPKGTPAEVVTRVNQAVNEILPSLQAQMVREGADPAGGSP CHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH QQFGDFTRKEYEKWKVVVKASGATVD HHHHHHHHHHHHHEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3299368 [H]