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The map label for this gene is 94313121

Identifier: 94313121

GI number: 94313121

Start: 778616

End: 779764

Strand: Reverse

Name: 94313121

Synonym: Rmet_4194

Alternate gene names: NA

Gene position: 779764-778616 (Counterclockwise)

Preceding gene: 94313123

Following gene: 291481518

Centisome position: 30.22

GC content: 67.54

Gene sequence:

>1149_bases
ATGTCCATCGCCTTTGACCTGCCTCCCGCCGCGCGTCCCGGCCAGCCCGTAGACGCCATCGACACACCTTCGCTCGTCGT
CGACCTGGATGTCTTCGCCCGCAACATCAGCCGGATGCAGGCCGCGGCCGACGCGGCCGGCGTCAAGCTGCGTCCTCACG
CCAAGGCACACAAGTGCCCAGACGTTTCAGTTGCGCAGATCGCCCAGGGCGCAGTGGGCATCTGCTGCCAGAAGGTAAGT
GAGGCCGTGCCGTTCGCGCGCGCCGGTATCCACGACATCCACATCAGCAATGAACTCGCCAGCCCGGCCAAGGCGGCGCT
GCTGGCCGAACTGGCCCGGCATGCGCGCGTGAGCGTGTGCGTCGACGACGTCGCGCAGATCGACGCACTGGCCAGTGCTG
CCTCGGCGGCGGGCAGCGCGGTCGATGTCTTCGTCGAGATCGACGTCGGCCAGGGTCGCTGCGGTGTGCGGGATGCATCC
GACGCTCTGCGGCTCGCAGAGCGCATCGCGAATCAGTCGGCACTGACATTTCGCGGCCTGCAGGCATACCACGGCGGCGT
CCAGCATCTGCGCGGCTGGGCCGAGCGTCGTGACGCCGCCGCACGGGCTGCCGAGCGCACTGGTAGCGTCATCGCACGCC
TCGGCGCAGTCGGCGTGCGCTGTGACGTGGTGACCGGGGGCGGCAGCGGCAGCGTGGAGTTCGACCTGACCAGTGGGGTC
TATACCGAAATCCAGCCAGGTTCCTATGTGTTCATGGACGCGGACTACGGCAGCAATGCCTATACCGGCACGCTGCGCTT
CGAACATAGCCTCTTTATCGCCACCACGGTCATGAGCGTGGCGGCGGAAGACCGCGTGATTCTGGATGCGGGACTGAAGT
CGATGGCGGTCGATTCCGGGCTGCCGTGGATCTGGGCCGAGGGCGCGGCGTCGACGACGCTCGACTATGTGGCGGCCAAC
GACGAGCACGGCATCGTGAAGCCACGCCGCGCCGACACCCCCGAGGCATTGCCCGCACTGGGCAGCCGCGTCATGCTTGT
GCCGGGCCATTGCGACCCGACCCTGAATCTTTATGACGAGATCGTCGGCGTCCGGGCCGGCGTGGTGGAATGTGTCTGGC
CGATCAGCGCGCGTGGGCTGAGCCGCTGA

Upstream 100 bases:

>100_bases
AGCACTCCCGGGCGACGGCATGGCGGACCGTGCTACGCTGTCTCGCACATCGTGTGGTACGTATCGCCGGTCCTGTCCCC
CAGTCAACCGCCATCTCGCC

Downstream 100 bases:

>100_bases
TTGCCGGAACTTGAGCGCCCGCCCGCTACGCGAGTTGGGCGGCGATTTCGTTCAGATCGGCCCGCGCCCAGATCACGCCG
GTCCAGGCCTCGAAACGGAG

Product: amino acid processing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MSIAFDLPPAARPGQPVDAIDTPSLVVDLDVFARNISRMQAAADAAGVKLRPHAKAHKCPDVSVAQIAQGAVGICCQKVS
EAVPFARAGIHDIHISNELASPAKAALLAELARHARVSVCVDDVAQIDALASAASAAGSAVDVFVEIDVGQGRCGVRDAS
DALRLAERIANQSALTFRGLQAYHGGVQHLRGWAERRDAAARAAERTGSVIARLGAVGVRCDVVTGGGSGSVEFDLTSGV
YTEIQPGSYVFMDADYGSNAYTGTLRFEHSLFIATTVMSVAAEDRVILDAGLKSMAVDSGLPWIWAEGAASTTLDYVAAN
DEHGIVKPRRADTPEALPALGSRVMLVPGHCDPTLNLYDEIVGVRAGVVECVWPISARGLSR

Sequences:

>Translated_382_residues
MSIAFDLPPAARPGQPVDAIDTPSLVVDLDVFARNISRMQAAADAAGVKLRPHAKAHKCPDVSVAQIAQGAVGICCQKVS
EAVPFARAGIHDIHISNELASPAKAALLAELARHARVSVCVDDVAQIDALASAASAAGSAVDVFVEIDVGQGRCGVRDAS
DALRLAERIANQSALTFRGLQAYHGGVQHLRGWAERRDAAARAAERTGSVIARLGAVGVRCDVVTGGGSGSVEFDLTSGV
YTEIQPGSYVFMDADYGSNAYTGTLRFEHSLFIATTVMSVAAEDRVILDAGLKSMAVDSGLPWIWAEGAASTTLDYVAAN
DEHGIVKPRRADTPEALPALGSRVMLVPGHCDPTLNLYDEIVGVRAGVVECVWPISARGLSR
>Mature_381_residues
SIAFDLPPAARPGQPVDAIDTPSLVVDLDVFARNISRMQAAADAAGVKLRPHAKAHKCPDVSVAQIAQGAVGICCQKVSE
AVPFARAGIHDIHISNELASPAKAALLAELARHARVSVCVDDVAQIDALASAASAAGSAVDVFVEIDVGQGRCGVRDASD
ALRLAERIANQSALTFRGLQAYHGGVQHLRGWAERRDAAARAAERTGSVIARLGAVGVRCDVVTGGGSGSVEFDLTSGVY
TEIQPGSYVFMDADYGSNAYTGTLRFEHSLFIATTVMSVAAEDRVILDAGLKSMAVDSGLPWIWAEGAASTTLDYVAAND
EHGIVKPRRADTPEALPALGSRVMLVPGHCDPTLNLYDEIVGVRAGVVECVWPISARGLSR

Specific function: Catalyzes the reversible cleavage of D-theronine or D- allothreonine into glycine and acetaldehyde. Can also cleave D- beta-phenylserine, D-beta-hydroxy-alpha-aminovaleric acid, D-beta- 3,4-dihydroxyphenylserine and D-beta-3,4- methylenedioxyphenylserine

COG id: COG3616

COG function: function code E; Predicted amino acid aldolase or racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DSD1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: =4.1.2.42 [H]

Molecular weight: Translated: 39943; Mature: 39811

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIAFDLPPAARPGQPVDAIDTPSLVVDLDVFARNISRMQAAADAAGVKLRPHAKAHKCP
CCEEECCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCC
DVSVAQIAQGAVGICCQKVSEAVPFARAGIHDIHISNELASPAKAALLAELARHARVSVC
CCHHHHHHCCHHHHHHHHHHHHCCHHHCCCEEEEECHHHCCHHHHHHHHHHHHHCEEHHH
VDDVAQIDALASAASAAGSAVDVFVEIDVGQGRCGVRDASDALRLAERIANQSALTFRGL
HHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
QAYHGGVQHLRGWAERRDAAARAAERTGSVIARLGAVGVRCDVVTGGGSGSVEFDLTSGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCE
YTEIQPGSYVFMDADYGSNAYTGTLRFEHSLFIATTVMSVAAEDRVILDAGLKSMAVDSG
EEEECCCCEEEEECCCCCCEEEEEEEEECHHHHHHHHHHHHCCCCEEEECCCHHHHHCCC
LPWIWAEGAASTTLDYVAANDEHGIVKPRRADTPEALPALGSRVMLVPGHCDPTLNLYDE
CCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCHHHHHH
IVGVRAGVVECVWPISARGLSR
HHHHHHCHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SIAFDLPPAARPGQPVDAIDTPSLVVDLDVFARNISRMQAAADAAGVKLRPHAKAHKCP
CEEECCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCC
DVSVAQIAQGAVGICCQKVSEAVPFARAGIHDIHISNELASPAKAALLAELARHARVSVC
CCHHHHHHCCHHHHHHHHHHHHCCHHHCCCEEEEECHHHCCHHHHHHHHHHHHHCEEHHH
VDDVAQIDALASAASAAGSAVDVFVEIDVGQGRCGVRDASDALRLAERIANQSALTFRGL
HHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
QAYHGGVQHLRGWAERRDAAARAAERTGSVIARLGAVGVRCDVVTGGGSGSVEFDLTSGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCE
YTEIQPGSYVFMDADYGSNAYTGTLRFEHSLFIATTVMSVAAEDRVILDAGLKSMAVDSG
EEEECCCCEEEEECCCCCCEEEEEEEEECHHHHHHHHHHHHCCCCEEEECCCHHHHHCCC
LPWIWAEGAASTTLDYVAANDEHGIVKPRRADTPEALPALGSRVMLVPGHCDPTLNLYDE
CCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCHHHHHH
IVGVRAGVVECVWPISARGLSR
HHHHHHCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9642221 [H]