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The map label for this gene is crtB

Identifier: 94313076

GI number: 94313076

Start: 724808

End: 725656

Strand: Reverse

Name: crtB

Synonym: Rmet_4149

Alternate gene names: NA

Gene position: 725656-724808 (Counterclockwise)

Preceding gene: 94313077

Following gene: 94313075

Centisome position: 28.13

GC content: 69.14

Gene sequence:

>849_bases
GTGGCCGGTACTGAAATCGCAACGCCAGGCGGGCCGATCGCCGGACCCGCCGTGTCATCCGGAAGCTCGTTCCATGCGGC
CATGCGCATCCTGCCCGCTTCGCAGCGGCAGGCCATGTTCGAGATCTACGCGTTTTGCCGCGCCGTGGACGACATCGCCG
ATGGCGACACCCAGCACGCCGACCGCCTCGCCGCGCTGGAACAGTGGCGCGCCGACATCGCCGCCTGCTATGCAGGCCAG
GCGCCTGCGGCGCTGCGCCCGCTCGACGAGCAGATCAAGGCGTTCAATCTCCAGCAGCAGGATTTTTCCGACGTCATCGA
CGGCATGATCATGGACGTCGTCGCCACGATCGTCGCGCCGGATGCCGCCACGCTGGACACCTACTGCGACCGCGTGGCCA
GCGCCGTCGGCCGCCTGGCCGTGCGCGTGTTCGGCCTGGACGAAGCACCCGGCATCGCGCTGGCGCATCACCTTGGCCGT
GCGCTGCAGCTGACCAACATCCTGCGCGACCTCGACGAGGACGCCGAGATCGGCCGTCTGTACCTGCCGGCCGAGGCCCT
GGCCGCCGCCGGCATTCCCGTCGGCAAGCCATACGACGTCATCCATCACCCCGCGATCGCCGAGGTCTGCACCGGCATCG
CGCGCGATGCTCAGGCTCACTACGATGCCTCCGCCGCGATCATGGCGCGCTGCCCGGCGCGCGTGGTGCGTTCGCCGCGC
ATCATGTCCGATGTCTATCACGGCATCCTGACCCGCCTGCTGGCCCGTGGCTGGCAACCGCCGCGCGCGCGCGTGCGCGT
GCCCAAGGCAAAGCTGGTCTGGATTCTGCTCCGACATGCCATCGCATGA

Upstream 100 bases:

>100_bases
ATCGCCCGACTTCGAATCCCCCCAAATTCTGCCGTTCCCGGGGCGCCACCCGCTGGCTGCCCCGCTGGAAGGTATTTGAC
AATGCGTGCCGAGGAAACCC

Downstream 100 bases:

>100_bases
TTTGCCCGCCTTGTATTTAGCCAAGGCACGCGGCCATTGCCGCGTGCCCAGAACAGAGAAGTGCCCCCGATTTAGATGAA
CCAGGCCGCAACAATAACCC

Product: phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MAGTEIATPGGPIAGPAVSSGSSFHAAMRILPASQRQAMFEIYAFCRAVDDIADGDTQHADRLAALEQWRADIAACYAGQ
APAALRPLDEQIKAFNLQQQDFSDVIDGMIMDVVATIVAPDAATLDTYCDRVASAVGRLAVRVFGLDEAPGIALAHHLGR
ALQLTNILRDLDEDAEIGRLYLPAEALAAAGIPVGKPYDVIHHPAIAEVCTGIARDAQAHYDASAAIMARCPARVVRSPR
IMSDVYHGILTRLLARGWQPPRARVRVPKAKLVWILLRHAIA

Sequences:

>Translated_282_residues
MAGTEIATPGGPIAGPAVSSGSSFHAAMRILPASQRQAMFEIYAFCRAVDDIADGDTQHADRLAALEQWRADIAACYAGQ
APAALRPLDEQIKAFNLQQQDFSDVIDGMIMDVVATIVAPDAATLDTYCDRVASAVGRLAVRVFGLDEAPGIALAHHLGR
ALQLTNILRDLDEDAEIGRLYLPAEALAAAGIPVGKPYDVIHHPAIAEVCTGIARDAQAHYDASAAIMARCPARVVRSPR
IMSDVYHGILTRLLARGWQPPRARVRVPKAKLVWILLRHAIA
>Mature_281_residues
AGTEIATPGGPIAGPAVSSGSSFHAAMRILPASQRQAMFEIYAFCRAVDDIADGDTQHADRLAALEQWRADIAACYAGQA
PAALRPLDEQIKAFNLQQQDFSDVIDGMIMDVVATIVAPDAATLDTYCDRVASAVGRLAVRVFGLDEAPGIALAHHLGRA
LQLTNILRDLDEDAEIGRLYLPAEALAAAGIPVGKPYDVIHHPAIAEVCTGIARDAQAHYDASAAIMARCPARVVRSPRI
MSDVYHGILTRLLARGWQPPRARVRVPKAKLVWILLRHAIA

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene. Probably part of an operon y4aABCD involved in the synthesis of an isoprenoid compound [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR017828
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 30221; Mature: 30090

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGTEIATPGGPIAGPAVSSGSSFHAAMRILPASQRQAMFEIYAFCRAVDDIADGDTQHA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
DRLAALEQWRADIAACYAGQAPAALRPLDEQIKAFNLQQQDFSDVIDGMIMDVVATIVAP
HHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
DAATLDTYCDRVASAVGRLAVRVFGLDEAPGIALAHHLGRALQLTNILRDLDEDAEIGRL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
YLPAEALAAAGIPVGKPYDVIHHPAIAEVCTGIARDAQAHYDASAAIMARCPARVVRSPR
ECCHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHCCH
IMSDVYHGILTRLLARGWQPPRARVRVPKAKLVWILLRHAIA
HHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGTEIATPGGPIAGPAVSSGSSFHAAMRILPASQRQAMFEIYAFCRAVDDIADGDTQHA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
DRLAALEQWRADIAACYAGQAPAALRPLDEQIKAFNLQQQDFSDVIDGMIMDVVATIVAP
HHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
DAATLDTYCDRVASAVGRLAVRVFGLDEAPGIALAHHLGRALQLTNILRDLDEDAEIGRL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
YLPAEALAAAGIPVGKPYDVIHHPAIAEVCTGIARDAQAHYDASAAIMARCPARVVRSPR
ECCHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHCCH
IMSDVYHGILTRLLARGWQPPRARVRVPKAKLVWILLRHAIA
HHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]