Click here to switch to the map view.

The map label for this gene is 94313064

Identifier: 94313064

GI number: 94313064

Start: 711325

End: 712350

Strand: Direct

Name: 94313064

Synonym: Rmet_4137

Alternate gene names: NA

Gene position: 711325-712350 (Clockwise)

Preceding gene: 94313063

Following gene: 94313065

Centisome position: 27.57

GC content: 62.38

Gene sequence:

>1026_bases
ATGTCGCTGTTTTCGTCCGCTTCCACCCTGACCCGTCGCGCCGCCGTTGCCATGCTGACAGCGGGCCTCGCCTTGACTGG
CAATGCGCACGCCGAAGGCCGCCTGCGCATTGCCGAGCAGTTCGGCGTGGTCTATCTGCTGCTCAACGTCGCACGTGACC
AGCAACTGATCGAGAAACACGGCAAGCAGCAGGGTATCGACGTCAAGGTCGAATGGACGCAGCTTTCCGGTGGCGCGGCG
GTCAACGATGCCTTGCTCTCCGGCGCGATCGACATCGCCGGAGCTGGTGTCGGCCCGCTGCTGACGCTGTGGGATCGCAC
CCAGGGCAAGCAGAACGTGAAGGGCGTGGCGTCGCTTGGCAACTTCCCGTATTACCTGGTCAGCAACAATCCCAAGATCA
AGACGATTGCGGATTTCACCGAGAAGGACCGCATCGCGTTGCCGGCGGTGACGGTCTCGGTGCAGTCGCGCGTGCTGCAA
TATGCCGCTACCAAGCAGTGGGGTGACAAGGAATTCAACCGGCTCGACAAATGGACCGTGGCGGTGCCGCATCCCGATGC
TGCGGCGGCGATCATTGCAGGCGGCACCGAGATCACTGGGCACTTCGGCAACCCGCCGTTCCAGGAGCAGGAACTGGCGG
GGAATCCGAACGCGCGCATCGTGCTCAATTCCTACGATGTGCTCGGCGGTCCCAGCTCCGCCACGGTGCTCTACGCGACC
GAGAAATTCCGCAGCGAGAACCCGAAAACCTATCGCGCGTTCGTCGATGCGCTGGCCGAAGCCGCCCAGTTCGCAACGAA
GAACCCGGAAGCTGCCGCCGATCTGTATATCCGCGTGAACAAGGCGAAGATCGACCGCGCGCTGCTGGTGAAGATCCTGA
AGAACCCGCAGGTGCAGTTCAAGGTGACGCCGCAGAATACGTTCGCGCTGGCGGACTTCATGTATCGCGTGGGTGCGATC
AAGCATCAGCCGAAGTCGTGGCAGGACTATTTCTTCCAGGACCCGGCAACCGCCGAAGGGAGCTGA

Upstream 100 bases:

>100_bases
CTGCGGCGCGTGATGTATCGCACCACGATCGAAGGCGATCAGCCGTTCTGATTCGATTCTCGTTTTTTCACTCCGGCCCC
ATTTTTCAGGAGTCCATTGC

Downstream 100 bases:

>100_bases
CATGGCCGAAGGCAATAGCGCGCACCTGCGTGTGGTCGCCAGTCACGAACCGCTGCTGCAGGTGGATGGCGTATCGCTGG
AGTACCGCACCGCGCAGCGC

Product: ABC-type nitrate/sulfonate/bicarbonate transporter periplasmic component

Products: NA

Alternate protein names: NMT1/THI5 Like Domain Protein; NLPA Lipoprotein; Transporter Periplasmic Component; Nlpa Lipoprotein; ABC-Type Transporter Periplasmic; Periplasmic Protein

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MSLFSSASTLTRRAAVAMLTAGLALTGNAHAEGRLRIAEQFGVVYLLLNVARDQQLIEKHGKQQGIDVKVEWTQLSGGAA
VNDALLSGAIDIAGAGVGPLLTLWDRTQGKQNVKGVASLGNFPYYLVSNNPKIKTIADFTEKDRIALPAVTVSVQSRVLQ
YAATKQWGDKEFNRLDKWTVAVPHPDAAAAIIAGGTEITGHFGNPPFQEQELAGNPNARIVLNSYDVLGGPSSATVLYAT
EKFRSENPKTYRAFVDALAEAAQFATKNPEAAADLYIRVNKAKIDRALLVKILKNPQVQFKVTPQNTFALADFMYRVGAI
KHQPKSWQDYFFQDPATAEGS

Sequences:

>Translated_341_residues
MSLFSSASTLTRRAAVAMLTAGLALTGNAHAEGRLRIAEQFGVVYLLLNVARDQQLIEKHGKQQGIDVKVEWTQLSGGAA
VNDALLSGAIDIAGAGVGPLLTLWDRTQGKQNVKGVASLGNFPYYLVSNNPKIKTIADFTEKDRIALPAVTVSVQSRVLQ
YAATKQWGDKEFNRLDKWTVAVPHPDAAAAIIAGGTEITGHFGNPPFQEQELAGNPNARIVLNSYDVLGGPSSATVLYAT
EKFRSENPKTYRAFVDALAEAAQFATKNPEAAADLYIRVNKAKIDRALLVKILKNPQVQFKVTPQNTFALADFMYRVGAI
KHQPKSWQDYFFQDPATAEGS
>Mature_340_residues
SLFSSASTLTRRAAVAMLTAGLALTGNAHAEGRLRIAEQFGVVYLLLNVARDQQLIEKHGKQQGIDVKVEWTQLSGGAAV
NDALLSGAIDIAGAGVGPLLTLWDRTQGKQNVKGVASLGNFPYYLVSNNPKIKTIADFTEKDRIALPAVTVSVQSRVLQY
AATKQWGDKEFNRLDKWTVAVPHPDAAAAIIAGGTEITGHFGNPPFQEQELAGNPNARIVLNSYDVLGGPSSATVLYATE
KFRSENPKTYRAFVDALAEAAQFATKNPEAAADLYIRVNKAKIDRALLVKILKNPQVQFKVTPQNTFALADFMYRVGAIK
HQPKSWQDYFFQDPATAEGS

Specific function: Unknown

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36973; Mature: 36842

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFSSASTLTRRAAVAMLTAGLALTGNAHAEGRLRIAEQFGVVYLLLNVARDQQLIEKH
CCCCHHHHHHHHHHHHHHHHHCEEEECCCCCCCEEEEHHHHCHHHHHHHHHHHHHHHHHC
GKQQGIDVKVEWTQLSGGAAVNDALLSGAIDIAGAGVGPLLTLWDRTQGKQNVKGVASLG
CCCCCCEEEEEEEEECCCCHHHHHHHHCCHHCCCCCCCHHHHHHHCCCCCHHHHHHHHCC
NFPYYLVSNNPKIKTIADFTEKDRIALPAVTVSVQSRVLQYAATKQWGDKEFNRLDKWTV
CCCEEEECCCCCEEEEECCCCCCCEEECEEEHHHHHHHHHHHHHHCCCCHHHHHHCCEEE
AVPHPDAAAAIIAGGTEITGHFGNPPFQEQELAGNPNARIVLNSYDVLGGPSSATVLYAT
EECCCCCCEEEEECCCEEECCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCEEEEEE
EKFRSENPKTYRAFVDALAEAAQFATKNPEAAADLYIRVNKAKIDRALLVKILKNPQVQF
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHCCCCEEE
KVTPQNTFALADFMYRVGAIKHQPKSWQDYFFQDPATAEGS
EECCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SLFSSASTLTRRAAVAMLTAGLALTGNAHAEGRLRIAEQFGVVYLLLNVARDQQLIEKH
CCCHHHHHHHHHHHHHHHHHCEEEECCCCCCCEEEEHHHHCHHHHHHHHHHHHHHHHHC
GKQQGIDVKVEWTQLSGGAAVNDALLSGAIDIAGAGVGPLLTLWDRTQGKQNVKGVASLG
CCCCCCEEEEEEEEECCCCHHHHHHHHCCHHCCCCCCCHHHHHHHCCCCCHHHHHHHHCC
NFPYYLVSNNPKIKTIADFTEKDRIALPAVTVSVQSRVLQYAATKQWGDKEFNRLDKWTV
CCCEEEECCCCCEEEEECCCCCCCEEECEEEHHHHHHHHHHHHHHCCCCHHHHHHCCEEE
AVPHPDAAAAIIAGGTEITGHFGNPPFQEQELAGNPNARIVLNSYDVLGGPSSATVLYAT
EECCCCCCEEEEECCCEEECCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCEEEEEE
EKFRSENPKTYRAFVDALAEAAQFATKNPEAAADLYIRVNKAKIDRALLVKILKNPQVQF
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHCCCCEEE
KVTPQNTFALADFMYRVGAIKHQPKSWQDYFFQDPATAEGS
EECCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA