| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94313062
Identifier: 94313062
GI number: 94313062
Start: 709698
End: 710168
Strand: Reverse
Name: 94313062
Synonym: Rmet_4135
Alternate gene names: NA
Gene position: 710168-709698 (Counterclockwise)
Preceding gene: 94313068
Following gene: 94313061
Centisome position: 27.52
GC content: 67.73
Gene sequence:
>471_bases ATGCAAGATGCAATACGTTCCATGCTGTCTCTGTCGATGGCGACAGCCTTCATGGTCTTGACCGGATGCGGAGGCAGCGA CAAGCCCAAGGCAGCGGCGCCCGCCACGTCCGGCAGCAATCCGGTTTCCGCCGCATCCAATGCCGCATCCGTCGCCGCAT CCAACGCCGGGGCCGGGGCCGTCGCCCAGCCGCCCATCCCGGGAGGCCAGCCAGCGGAGGCCGCAGCGCCCGGCCGGTTC CAGATCGTCGCCAGCGGCCAGACTCGCACCGGCCCGTTCCTGCTCGACACGCAGACGGGCCGGATCTGGCAGTTGAGGGA ATTCGCCGGTCTTCAGGGCTCGCCCGTCGCGTGGCACGAGATGACGATCATCGACGACAAGGGCGGCATGGGCATTACGT CCACCCAGTTCCAGAAACTCTATCCACCACGTGGCGGCGTGCCGCCACACGCTGCGTACCGGCACCGCTAG
Upstream 100 bases:
>100_bases GCGATTATGCGGATTCCTTATATCGCGTTGGCGCGCCCGCGGCCTCGCGCCTAAACTTGCTGGAATGACTGGAACAACAC CAGGCGCGCGGGAGGCCCGT
Downstream 100 bases:
>100_bases CGCCCCGGCTGCACGTCCGCCGATGAAACCGCCCCACCCGCCCGCGCTGACAATGTGACGGCGGTGCGCCACCGCACGCC CGCAGCGCGATTCCGTGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MQDAIRSMLSLSMATAFMVLTGCGGSDKPKAAAPATSGSNPVSAASNAASVAASNAGAGAVAQPPIPGGQPAEAAAPGRF QIVASGQTRTGPFLLDTQTGRIWQLREFAGLQGSPVAWHEMTIIDDKGGMGITSTQFQKLYPPRGGVPPHAAYRHR
Sequences:
>Translated_156_residues MQDAIRSMLSLSMATAFMVLTGCGGSDKPKAAAPATSGSNPVSAASNAASVAASNAGAGAVAQPPIPGGQPAEAAAPGRF QIVASGQTRTGPFLLDTQTGRIWQLREFAGLQGSPVAWHEMTIIDDKGGMGITSTQFQKLYPPRGGVPPHAAYRHR >Mature_156_residues MQDAIRSMLSLSMATAFMVLTGCGGSDKPKAAAPATSGSNPVSAASNAASVAASNAGAGAVAQPPIPGGQPAEAAAPGRF QIVASGQTRTGPFLLDTQTGRIWQLREFAGLQGSPVAWHEMTIIDDKGGMGITSTQFQKLYPPRGGVPPHAAYRHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15929; Mature: 15929
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDAIRSMLSLSMATAFMVLTGCGGSDKPKAAAPATSGSNPVSAASNAASVAASNAGAGA CHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC VAQPPIPGGQPAEAAAPGRFQIVASGQTRTGPFLLDTQTGRIWQLREFAGLQGSPVAWHE CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCEEEEHHHCCCCCCCCEEEE MTIIDDKGGMGITSTQFQKLYPPRGGVPPHAAYRHR EEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MQDAIRSMLSLSMATAFMVLTGCGGSDKPKAAAPATSGSNPVSAASNAASVAASNAGAGA CHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC VAQPPIPGGQPAEAAAPGRFQIVASGQTRTGPFLLDTQTGRIWQLREFAGLQGSPVAWHE CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCEEEEHHHCCCCCCCCEEEE MTIIDDKGGMGITSTQFQKLYPPRGGVPPHAAYRHR EEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA