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The map label for this gene is ydiK [C]

Identifier: 94312981

GI number: 94312981

Start: 619270

End: 620355

Strand: Reverse

Name: ydiK [C]

Synonym: Rmet_4053

Alternate gene names: 94312981

Gene position: 620355-619270 (Counterclockwise)

Preceding gene: 94312982

Following gene: 94312980

Centisome position: 24.04

GC content: 64.64

Gene sequence:

>1086_bases
ATGGCCGAATCACCCGGTCTGTATCACAAGACGTTCCTGCTGTTGCTCGCGGCGGTCTCCATCGCGTTCTTCTGGATTCT
GCTGCCCTTCTATGGCGCCGTTTTCTGGGGCGCCGTCCTCGCCATCATCTTCGCCCCGCTGCAACGGCGCCTGACGGCTG
GGCTGCGTGGGCGCAACAACGTGGCCGCGCTGCTCACGCTGCTGCTCGTGCTAGTGCTGGTCATCCTGCCGCTGACGATC
ATCACCGCCTCGCTGATCAACCAGGGCGTCAGCCTCTACGACAGCATACGCTCGGGCCAACTGAATTTCGGCGTGTACTT
TCAGCGCGCCGTGGACGCCCTGCCGCCCTACGTGCGCACGCTGCTGGCGAAGGTGGATCTGACCAGCATTGCGGACTTGC
AGGAAAAGCTGAGCGCCAGCGCGTTGCAGGCCAGCCAGTTCGTGGCTACGCGGGCGCTGAGCATCGGCCAGAATACGGCC
CAGTTCGTGATCAGCTTCGGCATCATGCTGTACCTGCTGTTCTTCCTGCTGCGCGACGGCCCGCGGCTGTCCCGCAAGAT
CCGCACGGCCGTGCCGCTCAGCGATTTGTACAAGCAGCACCTGATCCAGAAGTTCACCACCGTGGTACGCGCCACCGTGA
AGGGCAACGTGGCTGTGGCACTTGTGCAGGGGACACTCGGCGGCGGCATCTTCGCGGTCCTTGGTATCCAGGGCGCGCTG
CTCTGGGGCGTGATCATGGCGTTCCTGTCACTGCTGCCCGCCGTGGGCGCAGGTCTGATCTGGGCGCCCGTCGCGGTCTA
CTTCCTGCTGACCGGATCGACGGTCACGGGCCTGGTGCTGATTGGGTTCGGCGTGCTGGTGATCGGCATGGTCGACAACG
TGCTGCGCCCGATCCTGGTTGGCAAGGACACCCAGATGCCGGACTACGTGGTGCTGATCTCCACGCTCGGCGGCATGGCG
CTGTTCGGGCTCAACGGCTTCGTCATTGGGCCGCTGATCGCCGCGCTGTTCATCGCCTGTTGGGACCTGAACGCCCACGG
TATCGACGAGAACGGCGATATCGGCAGCAACGGCCCCGCCGCCTGA

Upstream 100 bases:

>100_bases
AGCGCCATTCACGGCCGTGCGGCCACACCTGGCACATGTCACGGGTGGCGACCTCACGGCATCGTAGAATGGCTGCTGGC
TTGCGCTTAAGGATTCCACC

Downstream 100 bases:

>100_bases
CGGAGAACGACGGTGGATCGCCTGCAGGCCATGAAGACGTTCGTAACCGTGGTGGATACGGGGGGTTTTACGCCCGCGGC
CCGGAAGCTCGACGTGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MAESPGLYHKTFLLLLAAVSIAFFWILLPFYGAVFWGAVLAIIFAPLQRRLTAGLRGRNNVAALLTLLLVLVLVILPLTI
ITASLINQGVSLYDSIRSGQLNFGVYFQRAVDALPPYVRTLLAKVDLTSIADLQEKLSASALQASQFVATRALSIGQNTA
QFVISFGIMLYLLFFLLRDGPRLSRKIRTAVPLSDLYKQHLIQKFTTVVRATVKGNVAVALVQGTLGGGIFAVLGIQGAL
LWGVIMAFLSLLPAVGAGLIWAPVAVYFLLTGSTVTGLVLIGFGVLVIGMVDNVLRPILVGKDTQMPDYVVLISTLGGMA
LFGLNGFVIGPLIAALFIACWDLNAHGIDENGDIGSNGPAA

Sequences:

>Translated_361_residues
MAESPGLYHKTFLLLLAAVSIAFFWILLPFYGAVFWGAVLAIIFAPLQRRLTAGLRGRNNVAALLTLLLVLVLVILPLTI
ITASLINQGVSLYDSIRSGQLNFGVYFQRAVDALPPYVRTLLAKVDLTSIADLQEKLSASALQASQFVATRALSIGQNTA
QFVISFGIMLYLLFFLLRDGPRLSRKIRTAVPLSDLYKQHLIQKFTTVVRATVKGNVAVALVQGTLGGGIFAVLGIQGAL
LWGVIMAFLSLLPAVGAGLIWAPVAVYFLLTGSTVTGLVLIGFGVLVIGMVDNVLRPILVGKDTQMPDYVVLISTLGGMA
LFGLNGFVIGPLIAALFIACWDLNAHGIDENGDIGSNGPAA
>Mature_360_residues
AESPGLYHKTFLLLLAAVSIAFFWILLPFYGAVFWGAVLAIIFAPLQRRLTAGLRGRNNVAALLTLLLVLVLVILPLTII
TASLINQGVSLYDSIRSGQLNFGVYFQRAVDALPPYVRTLLAKVDLTSIADLQEKLSASALQASQFVATRALSIGQNTAQ
FVISFGIMLYLLFFLLRDGPRLSRKIRTAVPLSDLYKQHLIQKFTTVVRATVKGNVAVALVQGTLGGGIFAVLGIQGALL
WGVIMAFLSLLPAVGAGLIWAPVAVYFLLTGSTVTGLVLIGFGVLVIGMVDNVLRPILVGKDTQMPDYVVLISTLGGMAL
FGLNGFVIGPLIAALFIACWDLNAHGIDENGDIGSNGPAA

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=343, Percent_Identity=27.6967930029155, Blast_Score=93, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38451; Mature: 38320

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAESPGLYHKTFLLLLAAVSIAFFWILLPFYGAVFWGAVLAIIFAPLQRRLTAGLRGRNN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VAALLTLLLVLVLVILPLTIITASLINQGVSLYDSIRSGQLNFGVYFQRAVDALPPYVRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHH
LLAKVDLTSIADLQEKLSASALQASQFVATRALSIGQNTAQFVISFGIMLYLLFFLLRDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PRLSRKIRTAVPLSDLYKQHLIQKFTTVVRATVKGNVAVALVQGTLGGGIFAVLGIQGAL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHH
LWGVIMAFLSLLPAVGAGLIWAPVAVYFLLTGSTVTGLVLIGFGVLVIGMVDNVLRPILV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GKDTQMPDYVVLISTLGGMALFGLNGFVIGPLIAALFIACWDLNAHGIDENGDIGSNGPA
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
A
C
>Mature Secondary Structure 
AESPGLYHKTFLLLLAAVSIAFFWILLPFYGAVFWGAVLAIIFAPLQRRLTAGLRGRNN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VAALLTLLLVLVLVILPLTIITASLINQGVSLYDSIRSGQLNFGVYFQRAVDALPPYVRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHH
LLAKVDLTSIADLQEKLSASALQASQFVATRALSIGQNTAQFVISFGIMLYLLFFLLRDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PRLSRKIRTAVPLSDLYKQHLIQKFTTVVRATVKGNVAVALVQGTLGGGIFAVLGIQGAL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHH
LWGVIMAFLSLLPAVGAGLIWAPVAVYFLLTGSTVTGLVLIGFGVLVIGMVDNVLRPILV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GKDTQMPDYVVLISTLGGMALFGLNGFVIGPLIAALFIACWDLNAHGIDENGDIGSNGPA
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]