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The map label for this gene is selD [H]

Identifier: 94312788

GI number: 94312788

Start: 402477

End: 403550

Strand: Reverse

Name: selD [H]

Synonym: Rmet_3860

Alternate gene names: 94312788

Gene position: 403550-402477 (Counterclockwise)

Preceding gene: 94312789

Following gene: 94312787

Centisome position: 15.64

GC content: 64.9

Gene sequence:

>1074_bases
ATGAACACCAACACCCCCCAAGTGGAGGCCACGCCTCCGCTGCGTCTCACCAGTTTTTCCCACGGGGGCGGTTGCGGCTG
CAAGATCGCGCCCGGCGTCCTGTCCCAGATCCTGCGCTCGAGCGCAGCGTTGCCGGTCCCCAAGGAACTGCTGGTCGGGA
TCGAAACGTCCGACGATGCCGCGGTCTATCAGCTCAACGAAACGCAGGCGCTGATCGCCACCACCGATTTCTTCATGCCG
ATCGTCGACGATCCGTTCGACTTCGGCCGCATTGCCGCCACCAACGCCATCAGCGACATCTATGCGATGGGCGGACGTCC
GATCATGGCGCTCGCACTGGTCGCGATGCCGGTCAACCAGTTGCCGCTCGAAGTGATCGGCCGGGTGATAGAAGGCGGTC
AGAGCGTTTGCCAGGCGGCTGGCATCCCCATTGCCGGTGGCCATACGATCGACTCGGTCGAACCCATCTATGGCCTGGTG
GTGATGGGGCTGGCGCATCCGAAGAAGATCCGCCGCAACCGCGACGCGCGCGCCGGTGACGTGCTGGTGCTCGGCAAGCC
GCTCGGCGTAGGCGTGATGTCCGCCGCGCTGAAGAAGGAAAAGCTCGATGATGCCGGATACGCACGGCTGATCGACACCA
CCACAAAGTTGAATACGCCCGGCATCGCCCTGGCCGAACTCGACGATGTCCATGCGATCACCGATGTCACCGGCTTCGGC
ATCGCAGGCCATACGCTGGAACTTGCGCGCGGCGCCGGCTTGCGCGCGGTGCTGGAATGGCCTCGCATTCCCTTGCTGCC
GAATGTGATGTCACTGGCGGAACAGGGCTTCATCACCGGTGCATCGCGCCGCAACTGGGAAGGCTATGGCAGCGAAGTCG
AACTCGCCGCTGGCCTGCCCGAGCTTGCCCAGCCGCTGGTCACCGACCCTCAGACCAGTGGCGGCCTGCTGATCAGTTGC
GCGCCAGACGCCGTGGGCAAGGTACTGGCCGTCTTCCGTGAGCAGGGCTTCACGGAAGCCACCGTGGTGGGCCGCATGGA
AGCCGGCGAACCCGGGCTGACGGTCACCCCATGA

Upstream 100 bases:

>100_bases
TAGGCAGTCATTGGGCAGTCATCGCACGACGCCGGGCGGGCCGGACTCGTACTGTAAAGTACGGCCTATCTCCGATCCGC
CTGGGCCCACGCCACTCCCT

Downstream 100 bases:

>100_bases
AACCAGTCGTAAGAGTCGAAGACCGCCACGCGTTCGACACGATCATCGACGCCCGCTCACCGGCGGAGTTCGAGATCGAC
CATATTCCCGGCGCCATCAA

Product: selenophosphate synthase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MNTNTPQVEATPPLRLTSFSHGGGCGCKIAPGVLSQILRSSAALPVPKELLVGIETSDDAAVYQLNETQALIATTDFFMP
IVDDPFDFGRIAATNAISDIYAMGGRPIMALALVAMPVNQLPLEVIGRVIEGGQSVCQAAGIPIAGGHTIDSVEPIYGLV
VMGLAHPKKIRRNRDARAGDVLVLGKPLGVGVMSAALKKEKLDDAGYARLIDTTTKLNTPGIALAELDDVHAITDVTGFG
IAGHTLELARGAGLRAVLEWPRIPLLPNVMSLAEQGFITGASRRNWEGYGSEVELAAGLPELAQPLVTDPQTSGGLLISC
APDAVGKVLAVFREQGFTEATVVGRMEAGEPGLTVTP

Sequences:

>Translated_357_residues
MNTNTPQVEATPPLRLTSFSHGGGCGCKIAPGVLSQILRSSAALPVPKELLVGIETSDDAAVYQLNETQALIATTDFFMP
IVDDPFDFGRIAATNAISDIYAMGGRPIMALALVAMPVNQLPLEVIGRVIEGGQSVCQAAGIPIAGGHTIDSVEPIYGLV
VMGLAHPKKIRRNRDARAGDVLVLGKPLGVGVMSAALKKEKLDDAGYARLIDTTTKLNTPGIALAELDDVHAITDVTGFG
IAGHTLELARGAGLRAVLEWPRIPLLPNVMSLAEQGFITGASRRNWEGYGSEVELAAGLPELAQPLVTDPQTSGGLLISC
APDAVGKVLAVFREQGFTEATVVGRMEAGEPGLTVTP
>Mature_357_residues
MNTNTPQVEATPPLRLTSFSHGGGCGCKIAPGVLSQILRSSAALPVPKELLVGIETSDDAAVYQLNETQALIATTDFFMP
IVDDPFDFGRIAATNAISDIYAMGGRPIMALALVAMPVNQLPLEVIGRVIEGGQSVCQAAGIPIAGGHTIDSVEPIYGLV
VMGLAHPKKIRRNRDARAGDVLVLGKPLGVGVMSAALKKEKLDDAGYARLIDTTTKLNTPGIALAELDDVHAITDVTGFG
IAGHTLELARGAGLRAVLEWPRIPLLPNVMSLAEQGFITGASRRNWEGYGSEVELAAGLPELAQPLVTDPQTSGGLLISC
APDAVGKVLAVFREQGFTEATVVGRMEAGEPGLTVTP

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=381, Percent_Identity=27.5590551181102, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI15011844, Length=390, Percent_Identity=27.4358974358974, Blast_Score=104, Evalue=2e-22,
Organism=Escherichia coli, GI1788062, Length=333, Percent_Identity=48.3483483483483, Blast_Score=311, Evalue=4e-86,
Organism=Caenorhabditis elegans, GI17543426, Length=355, Percent_Identity=29.5774647887324, Blast_Score=126, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24653602, Length=367, Percent_Identity=28.6103542234332, Blast_Score=108, Evalue=5e-24,
Organism=Drosophila melanogaster, GI24653604, Length=367, Percent_Identity=28.6103542234332, Blast_Score=108, Evalue=5e-24,
Organism=Drosophila melanogaster, GI28574119, Length=350, Percent_Identity=28.5714285714286, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI28574118, Length=266, Percent_Identity=30.4511278195489, Blast_Score=91, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 37255; Mature: 37255

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTNTPQVEATPPLRLTSFSHGGGCGCKIAPGVLSQILRSSAALPVPKELLVGIETSDDA
CCCCCCCEECCCCEEEEECCCCCCCCCEECHHHHHHHHHHCCCCCCCHHHEEEECCCCCC
AVYQLNETQALIATTDFFMPIVDDPFDFGRIAATNAISDIYAMGGRPIMALALVAMPVNQ
EEEEECCCEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
LPLEVIGRVIEGGQSVCQAAGIPIAGGHTIDSVEPIYGLVVMGLAHPKKIRRNRDARAGD
CCHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCC
VLVLGKPLGVGVMSAALKKEKLDDAGYARLIDTTTKLNTPGIALAELDDVHAITDVTGFG
EEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECHHCCCCCCEEEECCCCHHHHHHCCCCC
IAGHTLELARGAGLRAVLEWPRIPLLPNVMSLAEQGFITGASRRNWEGYGSEVELAAGLP
CCCCHHHHHCCCCCCEECCCCCCCCCHHHHHHHHCCCEECCCCCCCCCCCCEEEEECCCH
ELAQPLVTDPQTSGGLLISCAPDAVGKVLAVFREQGFTEATVVGRMEAGEPGLTVTP
HHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEECC
>Mature Secondary Structure
MNTNTPQVEATPPLRLTSFSHGGGCGCKIAPGVLSQILRSSAALPVPKELLVGIETSDDA
CCCCCCCEECCCCEEEEECCCCCCCCCEECHHHHHHHHHHCCCCCCCHHHEEEECCCCCC
AVYQLNETQALIATTDFFMPIVDDPFDFGRIAATNAISDIYAMGGRPIMALALVAMPVNQ
EEEEECCCEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
LPLEVIGRVIEGGQSVCQAAGIPIAGGHTIDSVEPIYGLVVMGLAHPKKIRRNRDARAGD
CCHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCC
VLVLGKPLGVGVMSAALKKEKLDDAGYARLIDTTTKLNTPGIALAELDDVHAITDVTGFG
EEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECHHCCCCCCEEEECCCCHHHHHHCCCCC
IAGHTLELARGAGLRAVLEWPRIPLLPNVMSLAEQGFITGASRRNWEGYGSEVELAAGLP
CCCCHHHHHCCCCCCEECCCCCCCCCHHHHHHHHCCCEECCCCCCCCCCCCEEEEECCCH
ELAQPLVTDPQTSGGLLISCAPDAVGKVLAVFREQGFTEATVVGRMEAGEPGLTVTP
HHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11826967 [H]