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The map label for this gene is ybjT [C]

Identifier: 94312780

GI number: 94312780

Start: 394067

End: 395359

Strand: Reverse

Name: ybjT [C]

Synonym: Rmet_3852

Alternate gene names: 94312780

Gene position: 395359-394067 (Counterclockwise)

Preceding gene: 94312781

Following gene: 94312779

Centisome position: 15.32

GC content: 64.35

Gene sequence:

>1293_bases
ATGGCGGATCACAGGCGGCTCAGGGTCCTGGTGTGCGGCGCATCGGGCCTGATTGGCGCCGTGCTGTGCAAACGTCTGGA
AGCGCAGGGGCATGAGGTGATTCGCGGTGTACGCACGCCAACGTCGGCTCGTGACGTCGCCATGGATTTCGGGACCGATA
CCACCATCGAGCAATGGCTTCCGCGCGTGCAAGGCATGCACGTCGTCATCAATGCCGTCGGCATCATCGTCGAAACCGGC
ACGAATCGCTTCGAAGCCGTCCATCACCTGGCGCCGGCGGCGTTGTTCCGCGCCTGCGCCAAGGCCGGAGTGGGCCGCGT
CATCCAGATCTCGGCGCTTGGCGCCGATCGCGGCGACACGCCCTACTTTCGCAGCAAGCGCGGTGCAGACGACGTGCTGC
GTGCTTTGCCCGTGCAGTGGCAGGTCCTCTATCCATCGCTCGTGTATGCCCAGGACGGCGACTCCGCCGCGATGTTTCGT
ACCCTGGCGAGTCTTCCGGTGATACCGGTACCCGAACTTGGCGATGCCAGGTTTCAACCGGTTCATATCGACGATCTCGT
GGATACCGTCGTCACTGTCATCGTTCCGGCTATTCCCCCGGGCCAGTGCATTGAGGTCGTCGGCGCAAGCCGCATGTCAT
ATCGGGCGATGCTGGACACCTATCGCCAGGGAATGCAGTTGCCAGCGCCAATGTGGGCGACCATTCCCGCCCCGTGCATG
ACGGTGGCCGCGTATGTGGCGCGTTGCGTGCCGGGATCGAAGCTGACCCCCGACACGTGGCGGATGCTCCGGCGCGGGTG
TCATGGCGATGCCGCGCCGCTGACGCGCCTGCTCGGACATCGGCCACGCGCCATTGGCACTTTCATCGCACCCGGTGAAG
CCGATTGCCTGCGCCATCGCGCCGTTGGCGCATGGCGTATGCCGATGCTGCGGATCGTGATGGCCCTTGTCTGGTTGGCC
ACGGCACTGGTCACGCTGTTCGCCTACCCGCTTGCCGACAGCCTGGCACTGCTCGGCGCAGTCGGATTGCATGGCACGCC
CGCCATCGTGACGCTATATGCCGCGGTCTTCGTAGATGCGGCCATGGCCGTCGGATGCCTGCGCTATCCGTCACGCCGGC
TATGGGCGCTTCAGGCTGCGCTTGTCGCCGGCTACTCGCTGATCATCGCCGTCGCATTGCCGCAGTTCCTCTGGCATCCG
TTCGGGCCGGTGCTCAAGAACCTGCCGATTCTCGCCATTCTCTTCATCCTCTACGCGGAGCAGGAATCATGGAATACCTC
GCCATCAAGGTGA

Upstream 100 bases:

>100_bases
TTCCATGGGAAACGGGCATCGACCCGTTTCTTTTTTACCCGATTATTTCTGTCATTACTGAAATAACTGTATGAACAGCG
AAGAGAAGGGAACGGCAGGG

Downstream 100 bases:

>100_bases
TTCACATCATCTCGTCCGTCGTGCTGGTCGGCACCGGTTTTGGGACGGCCTTCTACCTGTTCTTCGCCAACCGCTCGGGC
TCGACCGAAGCCATCGCCGT

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NADH-Ubiquinone Oxidoreductase; NADH Dehydrogenase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Oxidoreductase Protein; Nucleoside-Diphosphate-Sugar Epimerase; DTDP-4-Dehydrorhamnose Reductase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; NADH Dehydrogenase/Oxidoreductase-Like Protein; NAD Dependent Epimerase/Dehydratase Family; NADH-Ubiquinone Oxidoreductase Subunit; Nucleoside-Diphosphate-Sugar Epimerases; Oxidoreductase; Transmembrane Protein; NADH Dehydrogenase 1 Alpha Subcomplex; NADH Dehydrogenase/NADH Dehydrogenase Protein; Ubiquinone Dependent NADH Dehydrogenase; Homolog NADH Dehydrogenase; Nucleoside-Diphosphate Sugar Epimerase; 3-Beta-Hydroxy-Delta(5)-Steroid Dehydrogenase; NADH Ubiquinone Oxidoreductase; Saccharopine Dehydrogenase; NADH-Quinone Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase Protein

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MADHRRLRVLVCGASGLIGAVLCKRLEAQGHEVIRGVRTPTSARDVAMDFGTDTTIEQWLPRVQGMHVVINAVGIIVETG
TNRFEAVHHLAPAALFRACAKAGVGRVIQISALGADRGDTPYFRSKRGADDVLRALPVQWQVLYPSLVYAQDGDSAAMFR
TLASLPVIPVPELGDARFQPVHIDDLVDTVVTVIVPAIPPGQCIEVVGASRMSYRAMLDTYRQGMQLPAPMWATIPAPCM
TVAAYVARCVPGSKLTPDTWRMLRRGCHGDAAPLTRLLGHRPRAIGTFIAPGEADCLRHRAVGAWRMPMLRIVMALVWLA
TALVTLFAYPLADSLALLGAVGLHGTPAIVTLYAAVFVDAAMAVGCLRYPSRRLWALQAALVAGYSLIIAVALPQFLWHP
FGPVLKNLPILAILFILYAEQESWNTSPSR

Sequences:

>Translated_430_residues
MADHRRLRVLVCGASGLIGAVLCKRLEAQGHEVIRGVRTPTSARDVAMDFGTDTTIEQWLPRVQGMHVVINAVGIIVETG
TNRFEAVHHLAPAALFRACAKAGVGRVIQISALGADRGDTPYFRSKRGADDVLRALPVQWQVLYPSLVYAQDGDSAAMFR
TLASLPVIPVPELGDARFQPVHIDDLVDTVVTVIVPAIPPGQCIEVVGASRMSYRAMLDTYRQGMQLPAPMWATIPAPCM
TVAAYVARCVPGSKLTPDTWRMLRRGCHGDAAPLTRLLGHRPRAIGTFIAPGEADCLRHRAVGAWRMPMLRIVMALVWLA
TALVTLFAYPLADSLALLGAVGLHGTPAIVTLYAAVFVDAAMAVGCLRYPSRRLWALQAALVAGYSLIIAVALPQFLWHP
FGPVLKNLPILAILFILYAEQESWNTSPSR
>Mature_429_residues
ADHRRLRVLVCGASGLIGAVLCKRLEAQGHEVIRGVRTPTSARDVAMDFGTDTTIEQWLPRVQGMHVVINAVGIIVETGT
NRFEAVHHLAPAALFRACAKAGVGRVIQISALGADRGDTPYFRSKRGADDVLRALPVQWQVLYPSLVYAQDGDSAAMFRT
LASLPVIPVPELGDARFQPVHIDDLVDTVVTVIVPAIPPGQCIEVVGASRMSYRAMLDTYRQGMQLPAPMWATIPAPCMT
VAAYVARCVPGSKLTPDTWRMLRRGCHGDAAPLTRLLGHRPRAIGTFIAPGEADCLRHRAVGAWRMPMLRIVMALVWLAT
ALVTLFAYPLADSLALLGAVGLHGTPAIVTLYAAVFVDAAMAVGCLRYPSRRLWALQAALVAGYSLIIAVALPQFLWHPF
GPVLKNLPILAILFILYAEQESWNTSPSR

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46596; Mature: 46465

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADHRRLRVLVCGASGLIGAVLCKRLEAQGHEVIRGVRTPTSARDVAMDFGTDTTIEQWL
CCCCCEEEEEEECCCHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHH
PRVQGMHVVINAVGIIVETGTNRFEAVHHLAPAALFRACAKAGVGRVIQISALGADRGDT
HHHCCHHHEEEHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
PYFRSKRGADDVLRALPVQWQVLYPSLVYAQDGDSAAMFRTLASLPVIPVPELGDARFQP
CCHHCCCCHHHHHHHCCCCEEEECCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
VHIDDLVDTVVTVIVPAIPPGQCIEVVGASRMSYRAMLDTYRQGMQLPAPMWATIPAPCM
CCHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHH
TVAAYVARCVPGSKLTPDTWRMLRRGCHGDAAPLTRLLGHRPRAIGTFIAPGEADCLRHR
HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCHHEEEECCCHHHHHHHH
AVGAWRMPMLRIVMALVWLATALVTLFAYPLADSLALLGAVGLHGTPAIVTLYAAVFVDA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AMAVGCLRYPSRRLWALQAALVAGYSLIIAVALPQFLWHPFGPVLKNLPILAILFILYAE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHC
QESWNTSPSR
CCCCCCCCCC
>Mature Secondary Structure 
ADHRRLRVLVCGASGLIGAVLCKRLEAQGHEVIRGVRTPTSARDVAMDFGTDTTIEQWL
CCCCEEEEEEECCCHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHH
PRVQGMHVVINAVGIIVETGTNRFEAVHHLAPAALFRACAKAGVGRVIQISALGADRGDT
HHHCCHHHEEEHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
PYFRSKRGADDVLRALPVQWQVLYPSLVYAQDGDSAAMFRTLASLPVIPVPELGDARFQP
CCHHCCCCHHHHHHHCCCCEEEECCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
VHIDDLVDTVVTVIVPAIPPGQCIEVVGASRMSYRAMLDTYRQGMQLPAPMWATIPAPCM
CCHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHH
TVAAYVARCVPGSKLTPDTWRMLRRGCHGDAAPLTRLLGHRPRAIGTFIAPGEADCLRHR
HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCHHEEEECCCHHHHHHHH
AVGAWRMPMLRIVMALVWLATALVTLFAYPLADSLALLGAVGLHGTPAIVTLYAAVFVDA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AMAVGCLRYPSRRLWALQAALVAGYSLIIAVALPQFLWHPFGPVLKNLPILAILFILYAE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHC
QESWNTSPSR
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA