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The map label for this gene is 94312779

Identifier: 94312779

GI number: 94312779

Start: 393627

End: 394070

Strand: Reverse

Name: 94312779

Synonym: Rmet_3851

Alternate gene names: NA

Gene position: 394070-393627 (Counterclockwise)

Preceding gene: 94312780

Following gene: 94312778

Centisome position: 15.27

GC content: 64.86

Gene sequence:

>444_bases
GTGATTCACATCATCTCGTCCGTCGTGCTGGTCGGCACCGGTTTTGGGACGGCCTTCTACCTGTTCTTCGCCAACCGCTC
GGGCTCGACCGAAGCCATCGCCGTGGTCTCGCGTCTCGTGGTGCGGGCGGACTGGTGGTTCACCACGCCTGCGGTCATCG
TCCAGCCCTTGTCCGGCGCCTACATGCTCCATCTGGCCGGATATCCGCTGAACTCGCCATGGATCGTGGCATCCGCCGCG
CTCTATCTTTTCGCGGGCGCCTGCTGGCTTCCGGTGGTGTGGTACCAGATCCGCATGTCCCGGACGGCAATGGCCGCGCA
CGAACGTGGCACGCCACTGCCGGCGTCCTATTGGCGCGATGCGCGCCGCTGGGAATACCTCGGCTATCCGGCATTCGCCG
CGATGGTGGCCGTGTTCGCGCTGATGGTGTTCAAGCCGATGTGA

Upstream 100 bases:

>100_bases
TCTGGCATCCGTTCGGGCCGGTGCTCAAGAACCTGCCGATTCTCGCCATTCTCTTCATCCTCTACGCGGAGCAGGAATCA
TGGAATACCTCGCCATCAAG

Downstream 100 bases:

>100_bases
GCGGGTGATATGAGCGGATGCGTTGAACGACAAATGGAGGGCGACCAGATGAACGCGCTGGTTCTTTACTTCGATGGCAA
ATGCCCGTTCTGTGCCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein-Like Protein; Transmembrane Protein; Integral Membrane Protein-Like; Integral Membrane-Like Protein; Exonuclease VII Large Subunit

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MIHIISSVVLVGTGFGTAFYLFFANRSGSTEAIAVVSRLVVRADWWFTTPAVIVQPLSGAYMLHLAGYPLNSPWIVASAA
LYLFAGACWLPVVWYQIRMSRTAMAAHERGTPLPASYWRDARRWEYLGYPAFAAMVAVFALMVFKPM

Sequences:

>Translated_147_residues
MIHIISSVVLVGTGFGTAFYLFFANRSGSTEAIAVVSRLVVRADWWFTTPAVIVQPLSGAYMLHLAGYPLNSPWIVASAA
LYLFAGACWLPVVWYQIRMSRTAMAAHERGTPLPASYWRDARRWEYLGYPAFAAMVAVFALMVFKPM
>Mature_147_residues
MIHIISSVVLVGTGFGTAFYLFFANRSGSTEAIAVVSRLVVRADWWFTTPAVIVQPLSGAYMLHLAGYPLNSPWIVASAA
LYLFAGACWLPVVWYQIRMSRTAMAAHERGTPLPASYWRDARRWEYLGYPAFAAMVAVFALMVFKPM

Specific function: Unknown

COG id: COG5528

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16371; Mature: 16371

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHIISSVVLVGTGFGTAFYLFFANRSGSTEAIAVVSRLVVRADWWFTTPAVIVQPLSGA
CEEHHHHHHHHCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCE
YMLHLAGYPLNSPWIVASAALYLFAGACWLPVVWYQIRMSRTAMAAHERGTPLPASYWRD
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ARRWEYLGYPAFAAMVAVFALMVFKPM
HHCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIHIISSVVLVGTGFGTAFYLFFANRSGSTEAIAVVSRLVVRADWWFTTPAVIVQPLSGA
CEEHHHHHHHHCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCE
YMLHLAGYPLNSPWIVASAALYLFAGACWLPVVWYQIRMSRTAMAAHERGTPLPASYWRD
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ARRWEYLGYPAFAAMVAVFALMVFKPM
HHCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA