| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94312593
Identifier: 94312593
GI number: 94312593
Start: 195365
End: 197092
Strand: Direct
Name: 94312593
Synonym: Rmet_3661
Alternate gene names: NA
Gene position: 195365-197092 (Clockwise)
Preceding gene: 94312592
Following gene: 94312594
Centisome position: 7.57
GC content: 64.7
Gene sequence:
>1728_bases ATGCGTCACGTCACGTCCGGCTCGATCCACCCACGCCAGCGCGGCACCGTCAGTCTGATGGCTGCGCTGCTGATTGCCGC CATTGGCGTCGCGGCGCTGGTGTCGCTCGACGTCGGCTTCGTGTTCTACACGCAGCGGCAGTTGCAGAAGCTGGTGGACG TGGCGGCGCTTTCTGGCGCGCAGCAATTGAAGAGCGCTGATGATCAGGCGACGACCAATGCCAACGTGCTGTCAAGCGTG ACGTCCGCCGCAGCCCAGAACGGCTACACCAAGGCCGTGGCGAATGATTGCACCACGGCAGTGGCTGGCGCGGCGGACGG CGTGCGGACGTGCCTTGGGTTGTGGGACCCCGCCAACCCTGCCAATGGCGACAGCACGCGGCACTTCGATCCGGGCTATC CGGCCACAACGGTGTCGGCCAATGCGGTGCGCGTGCAGGCCACGTTGACGGTACCGCTGCTGTTCATGTTCCAGGGGGGC CAGTCGCGGCAGCTACACGCCGAGGCGATTGCCGCCGCGAGTCCGCCCGCCGCGTCGTTCACGCTCGGCAGCGGCCTGCT CAGGCTCTCGTCGGGTAACGGCCTGCTGGGGCTGCTGCTGGGCAACTCGGTCAATCTGTCCGTGGCGGACTGGAGTGGAC TGGTAGGCGCGAACGTGACGCTCGAGCAGTTGCGTTTGCGGGCAGGTGTGGGCACAGTCGATCAGTTGCTGAACACTTCG CTCTCGATCCAGGACTTCTACGCGCTGGTGCTGGGTGCGGCGGGGCAGTCGGCGCTGCTCAACGCGGCGCTTGGCAGCCC CACGACACAGCTTGGCCTGAATGGCATTGGCACCAAGGTGACGCTGGGCCAGATGCTCGACCTGGGCGTGCTGACACCGG CGGCTTCGTCTGCGGCGGAGGCGGCGCTCAATGTGGCAACGTTGCTGACCACGGCCGCCTATGTCGCGCGCGGGACGAGC GCGGTGGATCTGAGTACGCTCAACGTGAAGACCGCGCTTGGATCGATCGGCGGCTCGATGTACATCATCCAGCCGCCGAA GGTGGCCGTGGGGCCGGCCAAGCAGTATCCGGATGGAACGTGGAAGACCACTGCGACGACCGCGCAGCTTGGCCTGAAAC TGGCCGCGCAGGTCTCTGTGCCGCTGGTAGTGGCCAACGTCAATCTGAATCTGCCGTTGTGGCTGCAGATCGCGCAGGCC AAGGGAGATCTGACGCATATCCAGTGCGCGGCTGCCGTTCCGGACCGGCGGGCGACGGTCAATGTGTCCACCAACGCCGT GATGGCATGCCTGGGCAACCCCGGCGGCACCGGCTGTTCCGGCGGCCCACTTACCATCGCCGACGTCCAGTTGTCGGCGG TCGGACTGTTCCCCATTGCCGATGCGAAGATGATCGGACAGCCGATCTCGCAGTCCGGACTGGCTGGTGCAGGCAACAGC TTCGTACTCGCACCGGGTGGTTACGTGGCTGCATCGTCGAGCACAGTGATCGGCGATACCGTGACCAACGTGATCAACGG CCTCAATCCAACGCTCGATGTCAGCCTGCTGCAACTTCAACTACTGAGCATTTCCCCGGGCTGGCTGCTGCAACAGGTGC TGAATCCATTGCTCACGCTGATCAACCAGCTCGTCAATACCTTGACGAGCCTGCTCGGCATCAGCCTTGCCAACGCCGAC TTGTGGCTCAACGGCGTCGACTGCAACAACACGGAACTCGTGTACTGA
Upstream 100 bases:
>100_bases TCCAGTATCCGTTGCCCGAATTCTTCAGTAGCCAGTCGACCGGTAGCGCATTGCGTGGCAGCACGGGCAGCCCTGCGCCG GTGGGGCAGTAGGCACCGCG
Downstream 100 bases:
>100_bases ACTGAACGATCATGAAAGCAGACCGGTGGGCCTACGAGAGCCTTGAAGTCTATGTGTGGGAAGGCAAGTACGAGATCGCC GATCGCGTCGCGCGCTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MRHVTSGSIHPRQRGTVSLMAALLIAAIGVAALVSLDVGFVFYTQRQLQKLVDVAALSGAQQLKSADDQATTNANVLSSV TSAAAQNGYTKAVANDCTTAVAGAADGVRTCLGLWDPANPANGDSTRHFDPGYPATTVSANAVRVQATLTVPLLFMFQGG QSRQLHAEAIAAASPPAASFTLGSGLLRLSSGNGLLGLLLGNSVNLSVADWSGLVGANVTLEQLRLRAGVGTVDQLLNTS LSIQDFYALVLGAAGQSALLNAALGSPTTQLGLNGIGTKVTLGQMLDLGVLTPAASSAAEAALNVATLLTTAAYVARGTS AVDLSTLNVKTALGSIGGSMYIIQPPKVAVGPAKQYPDGTWKTTATTAQLGLKLAAQVSVPLVVANVNLNLPLWLQIAQA KGDLTHIQCAAAVPDRRATVNVSTNAVMACLGNPGGTGCSGGPLTIADVQLSAVGLFPIADAKMIGQPISQSGLAGAGNS FVLAPGGYVAASSSTVIGDTVTNVINGLNPTLDVSLLQLQLLSISPGWLLQQVLNPLLTLINQLVNTLTSLLGISLANAD LWLNGVDCNNTELVY
Sequences:
>Translated_575_residues MRHVTSGSIHPRQRGTVSLMAALLIAAIGVAALVSLDVGFVFYTQRQLQKLVDVAALSGAQQLKSADDQATTNANVLSSV TSAAAQNGYTKAVANDCTTAVAGAADGVRTCLGLWDPANPANGDSTRHFDPGYPATTVSANAVRVQATLTVPLLFMFQGG QSRQLHAEAIAAASPPAASFTLGSGLLRLSSGNGLLGLLLGNSVNLSVADWSGLVGANVTLEQLRLRAGVGTVDQLLNTS LSIQDFYALVLGAAGQSALLNAALGSPTTQLGLNGIGTKVTLGQMLDLGVLTPAASSAAEAALNVATLLTTAAYVARGTS AVDLSTLNVKTALGSIGGSMYIIQPPKVAVGPAKQYPDGTWKTTATTAQLGLKLAAQVSVPLVVANVNLNLPLWLQIAQA KGDLTHIQCAAAVPDRRATVNVSTNAVMACLGNPGGTGCSGGPLTIADVQLSAVGLFPIADAKMIGQPISQSGLAGAGNS FVLAPGGYVAASSSTVIGDTVTNVINGLNPTLDVSLLQLQLLSISPGWLLQQVLNPLLTLINQLVNTLTSLLGISLANAD LWLNGVDCNNTELVY >Mature_575_residues MRHVTSGSIHPRQRGTVSLMAALLIAAIGVAALVSLDVGFVFYTQRQLQKLVDVAALSGAQQLKSADDQATTNANVLSSV TSAAAQNGYTKAVANDCTTAVAGAADGVRTCLGLWDPANPANGDSTRHFDPGYPATTVSANAVRVQATLTVPLLFMFQGG QSRQLHAEAIAAASPPAASFTLGSGLLRLSSGNGLLGLLLGNSVNLSVADWSGLVGANVTLEQLRLRAGVGTVDQLLNTS LSIQDFYALVLGAAGQSALLNAALGSPTTQLGLNGIGTKVTLGQMLDLGVLTPAASSAAEAALNVATLLTTAAYVARGTS AVDLSTLNVKTALGSIGGSMYIIQPPKVAVGPAKQYPDGTWKTTATTAQLGLKLAAQVSVPLVVANVNLNLPLWLQIAQA KGDLTHIQCAAAVPDRRATVNVSTNAVMACLGNPGGTGCSGGPLTIADVQLSAVGLFPIADAKMIGQPISQSGLAGAGNS FVLAPGGYVAASSSTVIGDTVTNVINGLNPTLDVSLLQLQLLSISPGWLLQQVLNPLLTLINQLVNTLTSLLGISLANAD LWLNGVDCNNTELVY
Specific function: Unknown
COG id: COG4655
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58364; Mature: 58364
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHVTSGSIHPRQRGTVSLMAALLIAAIGVAALVSLDVGFVFYTQRQLQKLVDVAALSGA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHCCH QQLKSADDQATTNANVLSSVTSAAAQNGYTKAVANDCTTAVAGAADGVRTCLGLWDPANP HHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC ANGDSTRHFDPGYPATTVSANAVRVQATLTVPLLFMFQGGQSRQLHAEAIAAASPPAASF CCCCCCCCCCCCCCCCEEECCEEEEEEEEEEEEEEEECCCCCCEEHHHHHHCCCCCCCEE TLGSGLLRLSSGNGLLGLLLGNSVNLSVADWSGLVGANVTLEQLRLRAGVGTVDQLLNTS ECCCCEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHCCCCHHHHHHCCC LSIQDFYALVLGAAGQSALLNAALGSPTTQLGLNGIGTKVTLGQMLDLGVLTPAASSAAE CCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHCCCCCCCEEEHHHHHHHHCCCCCCCHHHH AALNVATLLTTAAYVARGTSAVDLSTLNVKTALGSIGGSMYIIQPPKVAVGPAKQYPDGT HHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHCCCEEEEECCCCEEECCCCCCCCCC WKTTATTAQLGLKLAAQVSVPLVVANVNLNLPLWLQIAQAKGDLTHIQCAAAVPDRRATV CEECHHHHHHHHHEEEEECCEEEEEEECCCCCEEEEEECCCCCEEEEEEEECCCCCCEEE NVSTNAVMACLGNPGGTGCSGGPLTIADVQLSAVGLFPIADAKMIGQPISQSGLAGAGNS EECCCEEEEEECCCCCCCCCCCCEEEEEEEEEEEEEEECCCHHHHCCCCCCCCCCCCCCE FVLAPGGYVAASSSTVIGDTVTNVINGLNPTLDVSLLQLQLLSISPGWLLQQVLNPLLTL EEECCCCEEEECCCEEEHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHH INQLVNTLTSLLGISLANADLWLNGVDCNNTELVY HHHHHHHHHHHHCCEEECCEEEEECCCCCCCEEEC >Mature Secondary Structure MRHVTSGSIHPRQRGTVSLMAALLIAAIGVAALVSLDVGFVFYTQRQLQKLVDVAALSGA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHCCH QQLKSADDQATTNANVLSSVTSAAAQNGYTKAVANDCTTAVAGAADGVRTCLGLWDPANP HHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC ANGDSTRHFDPGYPATTVSANAVRVQATLTVPLLFMFQGGQSRQLHAEAIAAASPPAASF CCCCCCCCCCCCCCCCEEECCEEEEEEEEEEEEEEEECCCCCCEEHHHHHHCCCCCCCEE TLGSGLLRLSSGNGLLGLLLGNSVNLSVADWSGLVGANVTLEQLRLRAGVGTVDQLLNTS ECCCCEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHCCCCHHHHHHCCC LSIQDFYALVLGAAGQSALLNAALGSPTTQLGLNGIGTKVTLGQMLDLGVLTPAASSAAE CCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHCCCCCCCEEEHHHHHHHHCCCCCCCHHHH AALNVATLLTTAAYVARGTSAVDLSTLNVKTALGSIGGSMYIIQPPKVAVGPAKQYPDGT HHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHCCCEEEEECCCCEEECCCCCCCCCC WKTTATTAQLGLKLAAQVSVPLVVANVNLNLPLWLQIAQAKGDLTHIQCAAAVPDRRATV CEECHHHHHHHHHEEEEECCEEEEEEECCCCCEEEEEECCCCCEEEEEEEECCCCCCEEE NVSTNAVMACLGNPGGTGCSGGPLTIADVQLSAVGLFPIADAKMIGQPISQSGLAGAGNS EECCCEEEEEECCCCCCCCCCCCEEEEEEEEEEEEEEECCCHHHHCCCCCCCCCCCCCCE FVLAPGGYVAASSSTVIGDTVTNVINGLNPTLDVSLLQLQLLSISPGWLLQQVLNPLLTL EEECCCCEEEECCCEEEHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHH INQLVNTLTSLLGISLANADLWLNGVDCNNTELVY HHHHHHHHHHHHCCEEECCEEEEECCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA