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The map label for this gene is yidD [C]

Identifier: 94312545

GI number: 94312545

Start: 3926323

End: 3926613

Strand: Reverse

Name: yidD [C]

Synonym: Rmet_3614

Alternate gene names: 94312545

Gene position: 3926613-3926323 (Counterclockwise)

Preceding gene: 94312546

Following gene: 94312544

Centisome position: 99.96

GC content: 68.38

Gene sequence:

>291_bases
ATGAAGCGAATCCTGCTTGCCCTGCTGCGCATCTACAAGATCGCCCTGAGTCCTTACCTGGGCTCGCAGTGCCGCTTCCT
GCCCACATGTTCCGACTATGCCCGCGACGCCATCGTGCAGCACGGCGCGGCGCGCGGCACCTGGATGGCGGCGTGCAGAC
TCTGTCGCTGCCACCCATTCACAAAGGGCGGGTATGATCCCGTGCCTGCAACACACGGGACCGCCGCGGCGCCCCCGGCA
TCCGCCGCGCCAGGCCGCCCGCCTGTCACGGTCCGGCTTCCCAGACCCTGA

Upstream 100 bases:

>100_bases
CGGCCAAGCCGCTACCCGTTGCGCCCGCCGTACCCACGGCACCGCCGACGGCTTCTGCGGATGTGCCCACCACGCCCGAG
GCGCCTGCCTGACCACCACC

Downstream 100 bases:

>100_bases
TTTCCTCCGACCATAGCGAGACATGGATATCAAACGCACCATCCTGTGGGTCATCTTCTCGATGTCCCTCGTGCTGCTCT
ACGACAACTGGCAGCGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MKRILLALLRIYKIALSPYLGSQCRFLPTCSDYARDAIVQHGAARGTWMAACRLCRCHPFTKGGYDPVPATHGTAAAPPA
SAAPGRPPVTVRLPRP

Sequences:

>Translated_96_residues
MKRILLALLRIYKIALSPYLGSQCRFLPTCSDYARDAIVQHGAARGTWMAACRLCRCHPFTKGGYDPVPATHGTAAAPPA
SAAPGRPPVTVRLPRP
>Mature_96_residues
MKRILLALLRIYKIALSPYLGSQCRFLPTCSDYARDAIVQHGAARGTWMAACRLCRCHPFTKGGYDPVPATHGTAAAPPA
SAAPGRPPVTVRLPRP

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=68, Percent_Identity=47.0588235294118, Blast_Score=77, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3614_RALME (Q1LH90)

Other databases:

- EMBL:   CP000352
- RefSeq:   YP_585755.1
- STRING:   Q1LH90
- GeneID:   4040463
- GenomeReviews:   CP000352_GR
- KEGG:   rme:Rmet_3614
- eggNOG:   COG0759
- HOGENOM:   HBG634291
- OMA:   HPERYED
- ProtClustDB:   PRK00041
- BioCyc:   RMET266264:RMET_3614-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 10342; Mature: 10342

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILLALLRIYKIALSPYLGSQCRFLPTCSDYARDAIVQHGAARGTWMAACRLCRCHPF
CHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
TKGGYDPVPATHGTAAAPPASAAPGRPPVTVRLPRP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
>Mature Secondary Structure
MKRILLALLRIYKIALSPYLGSQCRFLPTCSDYARDAIVQHGAARGTWMAACRLCRCHPF
CHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
TKGGYDPVPATHGTAAAPPASAAPGRPPVTVRLPRP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA