| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94312525
Identifier: 94312525
GI number: 94312525
Start: 3905405
End: 3906304
Strand: Reverse
Name: 94312525
Synonym: Rmet_3594
Alternate gene names: NA
Gene position: 3906304-3905405 (Counterclockwise)
Preceding gene: 94312526
Following gene: 94312524
Centisome position: 99.45
GC content: 62.33
Gene sequence:
>900_bases ATGAAACAGCTATACGCGGCAGCCGCCCTCGGCGGCATCCTGGGGATTCTCGCGGCACCGCCCGGAGGCACCACGGCGTA CGCGCAGGGCACGTCCGCACCGGCCACGCAGACCCCGCGTGTCGCCACGCCATACGACGGCCTGCCCACTTCGCAACAGG CCACGATGCTCTCGAAACAGGTAGCCAGCGGCGAGCTTGCCGCGCAATCCGACGCGCAGGTACTGGCCACGTTCGAAGCG CTGCAGCCCGAAGCCATTCTGACGTGGGCACGGGCGGAAATGAATCGCTACCCCGAGTACGAATACTCGATGACGCGCCA GGAACGACTCAACGGTCAATGGCAAGACAAGCCAGCGCGCATGATGATCCGCTACCGCCATATGCCACGCCAGCTCTACG CGAAGTGGTTGCCAAACGGCGTGCAGGCCGGCCAGGAAATCATCTATGACGAGACCCGTCGCAAGGACGAGATGTACGGG CACCTCGGCGGCATCATGGGCTTCACGTCGATCTGGACCGCAATCGACGGCACATTGGCCAAATCCCAGTCGAATCACAC CGTGCGCGACCTTGGCTTCCAGTTCGTGCTGTCGATGCTCGAGCGCGATGCGAAGACGCTGCGCGCGGCGGGGCTGCCAG AGAAGTACAGCCGAGTCGAAATCGTGCAGGAGCAAGGCGTGCGCATGGTGGCGCTGACATGGGAGCTACCAGAAGGCGCG CCGAAGTACTACGCGAAGAAGGTGCAACTGATGTTCGATCTCAAGCACCCCTGGCCACGCGCGGAAACCGCGTGGGACGC GGACGGCAACATGGTCGAGAAGATCGTCTTTGAGAAGGCCCAGAAAAAGACCTTCGACGCATCGACCTTCGATCCCTCGA ACAGCGAATACAAGTTCTGA
Upstream 100 bases:
>100_bases CGAGGCGTGACCCGTTGCGCGCCACGCATGGCGCGACTTCACCCGCCTGCCACGGCAGCCCGCGGGAGGGACACGTCTTG CCCGCAAAAGGAGACATGCG
Downstream 100 bases:
>100_bases AGATGCCGAACGTGGGCCATCCCGTCCGTTTGAATTCGCGTGCCATGCATGACAAACGCGGTTTGAACAATGACGGGAGA GGCTTGCGTGACAACGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein Transmembrane
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MKQLYAAAALGGILGILAAPPGGTTAYAQGTSAPATQTPRVATPYDGLPTSQQATMLSKQVASGELAAQSDAQVLATFEA LQPEAILTWARAEMNRYPEYEYSMTRQERLNGQWQDKPARMMIRYRHMPRQLYAKWLPNGVQAGQEIIYDETRRKDEMYG HLGGIMGFTSIWTAIDGTLAKSQSNHTVRDLGFQFVLSMLERDAKTLRAAGLPEKYSRVEIVQEQGVRMVALTWELPEGA PKYYAKKVQLMFDLKHPWPRAETAWDADGNMVEKIVFEKAQKKTFDASTFDPSNSEYKF
Sequences:
>Translated_299_residues MKQLYAAAALGGILGILAAPPGGTTAYAQGTSAPATQTPRVATPYDGLPTSQQATMLSKQVASGELAAQSDAQVLATFEA LQPEAILTWARAEMNRYPEYEYSMTRQERLNGQWQDKPARMMIRYRHMPRQLYAKWLPNGVQAGQEIIYDETRRKDEMYG HLGGIMGFTSIWTAIDGTLAKSQSNHTVRDLGFQFVLSMLERDAKTLRAAGLPEKYSRVEIVQEQGVRMVALTWELPEGA PKYYAKKVQLMFDLKHPWPRAETAWDADGNMVEKIVFEKAQKKTFDASTFDPSNSEYKF >Mature_299_residues MKQLYAAAALGGILGILAAPPGGTTAYAQGTSAPATQTPRVATPYDGLPTSQQATMLSKQVASGELAAQSDAQVLATFEA LQPEAILTWARAEMNRYPEYEYSMTRQERLNGQWQDKPARMMIRYRHMPRQLYAKWLPNGVQAGQEIIYDETRRKDEMYG HLGGIMGFTSIWTAIDGTLAKSQSNHTVRDLGFQFVLSMLERDAKTLRAAGLPEKYSRVEIVQEQGVRMVALTWELPEGA PKYYAKKVQLMFDLKHPWPRAETAWDADGNMVEKIVFEKAQKKTFDASTFDPSNSEYKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33544; Mature: 33544
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLYAAAALGGILGILAAPPGGTTAYAQGTSAPATQTPRVATPYDGLPTSQQATMLSKQ CCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH VASGELAAQSDAQVLATFEALQPEAILTWARAEMNRYPEYEYSMTRQERLNGQWQDKPAR HHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHH MMIRYRHMPRQLYAKWLPNGVQAGQEIIYDETRRKDEMYGHLGGIMGFTSIWTAIDGTLA HHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSQSNHTVRDLGFQFVLSMLERDAKTLRAAGLPEKYSRVEIVQEQGVRMVALTWELPEGA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEEECCCCC PKYYAKKVQLMFDLKHPWPRAETAWDADGNMVEKIVFEKAQKKTFDASTFDPSNSEYKF HHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MKQLYAAAALGGILGILAAPPGGTTAYAQGTSAPATQTPRVATPYDGLPTSQQATMLSKQ CCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH VASGELAAQSDAQVLATFEALQPEAILTWARAEMNRYPEYEYSMTRQERLNGQWQDKPAR HHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHH MMIRYRHMPRQLYAKWLPNGVQAGQEIIYDETRRKDEMYGHLGGIMGFTSIWTAIDGTLA HHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSQSNHTVRDLGFQFVLSMLERDAKTLRAAGLPEKYSRVEIVQEQGVRMVALTWELPEGA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEEECCCCC PKYYAKKVQLMFDLKHPWPRAETAWDADGNMVEKIVFEKAQKKTFDASTFDPSNSEYKF HHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA