| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
Click here to switch to the map view.
The map label for this gene is 94312524
Identifier: 94312524
GI number: 94312524
Start: 3903809
End: 3905119
Strand: Reverse
Name: 94312524
Synonym: Rmet_3593
Alternate gene names: NA
Gene position: 3905119-3903809 (Counterclockwise)
Preceding gene: 94312525
Following gene: 94312523
Centisome position: 99.42
GC content: 65.37
Gene sequence:
>1311_bases ATGACGCTCGCTGCGTGCGGCGGCGGTGGAGATGGCGATTCCTCCAGCAGCGCAACGCCAGCCGCCGCTGCGCAGCAATG CGCCACCGTCGGCAACTGCCCCACCTCGGGGGCTACCGAGAACCAGCCCGTGGCCTCGCTGTGCCCAAGCACACTCGATT ACGGCACCACGTACACCGGCGGTTCCGGCGCGGGCGAGTTCCTGAAAATGCAGTTCGACTCGACCAGGGGCACGTACCAG ATCACGATCATCGAATCGGCCGTTCCCAAGGCACCGGGATCGGTATCGCCGACACGCGCGGGCGTCACGCTGACTGGCAC GATGACGCATCCGACCCGGCCGCTGCCGACTGCAGCGCAAAACAACTGCGCGTATGAACTGAAAACCGTCACCGCATCCG ACGGCGCATCGCAGGCCATCATCGACCCCGCCAATCCGCCGATCATTTTCATCGGCAACGGCGTGGCGGGTGGCGGCATT CCTGGCGCAACGATCCAGTATGGCGGCCTGCTGGGGCTCGGCAAGATCCCACAGCGCACGTTCCCGATGTACCCGGTGCT GGCATTCGCGCAGACTGAGACCGACTTCAGCAAGATCGCGGGCACGTACAACCTGCTCGGCTATCACCTTGTGCCGTCCG GCGGCAAGTTGACTGGCGCCACGAACTACGCGCCCGCTACCGCCAACACCGTGGAAACACTCAACGCCGATGGATCATGC GCGTCGGCCAGCGGCGGGTCCTGTCTATCGACGGGCCAACCCTGGCATTTGCGTGGCGGTAACGATGGCGCGTTCGGCAG CGACAACGATGGCGGGGCGGGCAGCAAGCCGTATCCACACTTCTATGCCAACGCGCTCGCGCCCGCGAACGCGTGCGCAC GCGGCGTGCTGGTGGTCGGCAAGCTCGAGGGCAAACAGGTGCCGCTGCTGGTCCGCGTGGGCTCCGCCTACATCAACGGA CTGGACATCAGAGTCGACGACGAATCCGGCCTTGCCCTGATGACGCCAACCACCACGGTCACCCAGGCCAGCATGCAGGG CAGCTACATCGGCTCGGGCAGCGACTTCAAGTACCTGTCCTCGGCGGTCCAGAACAACCTCGTTGCGTTGATCGACCCGC AGGACCCCTCGCTCAAACCGGTCAGCGGATTTCAGATGGACTTCACGCAAGCCACGCGGCCCGGCGTGGTGACCACTGTC GACAACAGCGGCATCACGGGATCGGTCATCACCACTGGCCCCGTGTATGCCCACCTGTTCGGCCCCGCAGCAGATCCAAC GTTCCGTGTCAGCGCGCTGGCCAGCCGCTGA
Upstream 100 bases:
>100_bases CGGCAATCGCCGGAGCGCCGGTCATAACGACAAGGAGACAACCATGCAGATGTCGCATGCTCGACACGCACTTTTTGCTG TTGCAGGGGTAAGCCTGACC
Downstream 100 bases:
>100_bases CGCAAGACATCCACTGCCTCACACATAGAAGAACCCCATAGGAGACATCATCATGCCGCTGCCGCAATCGCATCAACCAC GTTCCGCAGCTTCGCTGCGG
Product: putative lipoprotein
Products: NA
Alternate protein names: Large Exoprotein Involved In Heme Utilization Or Adhesion
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MTLAACGGGGDGDSSSSATPAAAAQQCATVGNCPTSGATENQPVASLCPSTLDYGTTYTGGSGAGEFLKMQFDSTRGTYQ ITIIESAVPKAPGSVSPTRAGVTLTGTMTHPTRPLPTAAQNNCAYELKTVTASDGASQAIIDPANPPIIFIGNGVAGGGI PGATIQYGGLLGLGKIPQRTFPMYPVLAFAQTETDFSKIAGTYNLLGYHLVPSGGKLTGATNYAPATANTVETLNADGSC ASASGGSCLSTGQPWHLRGGNDGAFGSDNDGGAGSKPYPHFYANALAPANACARGVLVVGKLEGKQVPLLVRVGSAYING LDIRVDDESGLALMTPTTTVTQASMQGSYIGSGSDFKYLSSAVQNNLVALIDPQDPSLKPVSGFQMDFTQATRPGVVTTV DNSGITGSVITTGPVYAHLFGPAADPTFRVSALASR
Sequences:
>Translated_436_residues MTLAACGGGGDGDSSSSATPAAAAQQCATVGNCPTSGATENQPVASLCPSTLDYGTTYTGGSGAGEFLKMQFDSTRGTYQ ITIIESAVPKAPGSVSPTRAGVTLTGTMTHPTRPLPTAAQNNCAYELKTVTASDGASQAIIDPANPPIIFIGNGVAGGGI PGATIQYGGLLGLGKIPQRTFPMYPVLAFAQTETDFSKIAGTYNLLGYHLVPSGGKLTGATNYAPATANTVETLNADGSC ASASGGSCLSTGQPWHLRGGNDGAFGSDNDGGAGSKPYPHFYANALAPANACARGVLVVGKLEGKQVPLLVRVGSAYING LDIRVDDESGLALMTPTTTVTQASMQGSYIGSGSDFKYLSSAVQNNLVALIDPQDPSLKPVSGFQMDFTQATRPGVVTTV DNSGITGSVITTGPVYAHLFGPAADPTFRVSALASR >Mature_435_residues TLAACGGGGDGDSSSSATPAAAAQQCATVGNCPTSGATENQPVASLCPSTLDYGTTYTGGSGAGEFLKMQFDSTRGTYQI TIIESAVPKAPGSVSPTRAGVTLTGTMTHPTRPLPTAAQNNCAYELKTVTASDGASQAIIDPANPPIIFIGNGVAGGGIP GATIQYGGLLGLGKIPQRTFPMYPVLAFAQTETDFSKIAGTYNLLGYHLVPSGGKLTGATNYAPATANTVETLNADGSCA SASGGSCLSTGQPWHLRGGNDGAFGSDNDGGAGSKPYPHFYANALAPANACARGVLVVGKLEGKQVPLLVRVGSAYINGL DIRVDDESGLALMTPTTTVTQASMQGSYIGSGSDFKYLSSAVQNNLVALIDPQDPSLKPVSGFQMDFTQATRPGVVTTVD NSGITGSVITTGPVYAHLFGPAADPTFRVSALASR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44037; Mature: 43905
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLAACGGGGDGDSSSSATPAAAAQQCATVGNCPTSGATENQPVASLCPSTLDYGTTYTG CEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHCCCCEECC GSGAGEFLKMQFDSTRGTYQITIIESAVPKAPGSVSPTRAGVTLTGTMTHPTRPLPTAAQ CCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC NNCAYELKTVTASDGASQAIIDPANPPIIFIGNGVAGGGIPGATIQYGGLLGLGKIPQRT CCCEEEEEEEEECCCCCEEEECCCCCCEEEEECCCCCCCCCCCEEEECCEECCCCCCCCC FPMYPVLAFAQTETDFSKIAGTYNLLGYHLVPSGGKLTGATNYAPATANTVETLNADGSC CCCCEEEEEEECCCCHHHHCCEEEEEEEEEECCCCEECCCCCCCCCCCCHHEEECCCCCC ASASGGSCLSTGQPWHLRGGNDGAFGSDNDGGAGSKPYPHFYANALAPANACARGVLVVG CCCCCCCEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHCCCEEEEE KLEGKQVPLLVRVGSAYINGLDIRVDDESGLALMTPTTTVTQASMQGSYIGSGSDFKYLS ECCCCCCEEEEEECCHHCCCEEEEEECCCCEEEECCCCCEEEHHCCCCEECCCCCHHHHH SAVQNNLVALIDPQDPSLKPVSGFQMDFTQATRPGVVTTVDNSGITGSVITTGPVYAHLF HHHHCCEEEEECCCCCCCCCCCCCEEEHHHCCCCCEEEEECCCCCEEEEEECCCEEEEEE GPAADPTFRVSALASR CCCCCCCEEEEEECCC >Mature Secondary Structure TLAACGGGGDGDSSSSATPAAAAQQCATVGNCPTSGATENQPVASLCPSTLDYGTTYTG EEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHCCCCEECC GSGAGEFLKMQFDSTRGTYQITIIESAVPKAPGSVSPTRAGVTLTGTMTHPTRPLPTAAQ CCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC NNCAYELKTVTASDGASQAIIDPANPPIIFIGNGVAGGGIPGATIQYGGLLGLGKIPQRT CCCEEEEEEEEECCCCCEEEECCCCCCEEEEECCCCCCCCCCCEEEECCEECCCCCCCCC FPMYPVLAFAQTETDFSKIAGTYNLLGYHLVPSGGKLTGATNYAPATANTVETLNADGSC CCCCEEEEEEECCCCHHHHCCEEEEEEEEEECCCCEECCCCCCCCCCCCHHEEECCCCCC ASASGGSCLSTGQPWHLRGGNDGAFGSDNDGGAGSKPYPHFYANALAPANACARGVLVVG CCCCCCCEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHCCCEEEEE KLEGKQVPLLVRVGSAYINGLDIRVDDESGLALMTPTTTVTQASMQGSYIGSGSDFKYLS ECCCCCCEEEEEECCHHCCCEEEEEECCCCEEEECCCCCEEEHHCCCCEECCCCCHHHHH SAVQNNLVALIDPQDPSLKPVSGFQMDFTQATRPGVVTTVDNSGITGSVITTGPVYAHLF HHHHCCEEEEECCCCCCCCCCCCCEEEHHHCCCCCEEEEECCCCCEEEEEECCCEEEEEE GPAADPTFRVSALASR CCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA