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The map label for this gene is pldB [H]

Identifier: 94312453

GI number: 94312453

Start: 3814104

End: 3815012

Strand: Reverse

Name: pldB [H]

Synonym: Rmet_3522

Alternate gene names: 94312453

Gene position: 3815012-3814104 (Counterclockwise)

Preceding gene: 94312454

Following gene: 94312452

Centisome position: 97.12

GC content: 65.46

Gene sequence:

>909_bases
GTGACCGCCGCTGGCCTTCCAGGCGCGCGCGAATCCGCCGTAACCGGAGCCGTACCCACCGAAACACGCCAACGAATGCG
CGATGGCACCGAACTGCTGCTGCGCACCTGGCTGCCTGATCCCCAACGCTTTGCCGAGCCGCTTGGCACGGTGCTGCTGG
TACATGGGCTGGCCGAGCATAGCGGGCGCTATGGCCACGTTGCTGCAGCGCTTTGCGCGCTCGGCCTGCGCGTGCGGGCC
TACGACCATCGCGGCCACGGCGCGAGTGGCGGGCCGCGCATGGTGGCGCCCACGCCGGACAGCTATCTCGACGATCTGGC
CGAAATCTACGATGGTGCAATGCGGCAATGGAACGAATTGCCGATCGTGCTCGGGCACAGCATGGGCGGACTCATTGCTG
CGCGCTTTGCCACCGCGCGCGTGCGGCCGATCCGCGCGCTGGTGCTGTCGTCGCCCGCGCTGGCGCTTCGTCTGTCCAAT
TCTATGCTTACGATGCATCGAGTGCTACTTGCTTTGATGCCTCGTATTCGTGTGCCGAATCCCATTGATGCCCGGCTGTT
GTCCCACGATGTCGAAGTGGGGCGCGCATATCGCACCGATCCGCTGGTGCAGGGGACGATCAGCGCCAGCGTGCTGGAGA
CATTCATCCGGGGAATGCCGCAGGCCCTGGCTGATGCGCCGCGGCTGGAAGCGCCCATGCTGATGCTCGTGGGTGGCGCG
GACCGCATCGTCGATCCGGAGGGCAGCCGCATCTTCTTCGAGAGCGCGCCAGAGGATCTGCGCGAGATGGTCTGGTTCGA
CACTGGCTATCACGAGATATTCAATGAAGCTGAGCCGTTGCGCGGCGAGGTGTTTGCGGCACTGACCGGCTGGCTGCGGC
AGCGCCTGGAGACTCCGGCAAAGCACTGA

Upstream 100 bases:

>100_bases
CGGGGGAGCGCAGGCGTCAGCGGGACTGAAGGATCCAGATCCAGATCACTAACAACAAGCAGGCGTACCCGACGAGGAGA
CGTGTGGGATGAATGAACCT

Downstream 100 bases:

>100_bases
CGGCGGAAGCACCCCGAGTCGTGCGATGATTTCGGGCATTCCAGCAGTAACTGCCGGTGTCTGAATAGGATCGCAGGGAA
ATGGAGACGTTCGACTACAT

Product: lysophospholipase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MTAAGLPGARESAVTGAVPTETRQRMRDGTELLLRTWLPDPQRFAEPLGTVLLVHGLAEHSGRYGHVAAALCALGLRVRA
YDHRGHGASGGPRMVAPTPDSYLDDLAEIYDGAMRQWNELPIVLGHSMGGLIAARFATARVRPIRALVLSSPALALRLSN
SMLTMHRVLLALMPRIRVPNPIDARLLSHDVEVGRAYRTDPLVQGTISASVLETFIRGMPQALADAPRLEAPMLMLVGGA
DRIVDPEGSRIFFESAPEDLREMVWFDTGYHEIFNEAEPLRGEVFAALTGWLRQRLETPAKH

Sequences:

>Translated_302_residues
MTAAGLPGARESAVTGAVPTETRQRMRDGTELLLRTWLPDPQRFAEPLGTVLLVHGLAEHSGRYGHVAAALCALGLRVRA
YDHRGHGASGGPRMVAPTPDSYLDDLAEIYDGAMRQWNELPIVLGHSMGGLIAARFATARVRPIRALVLSSPALALRLSN
SMLTMHRVLLALMPRIRVPNPIDARLLSHDVEVGRAYRTDPLVQGTISASVLETFIRGMPQALADAPRLEAPMLMLVGGA
DRIVDPEGSRIFFESAPEDLREMVWFDTGYHEIFNEAEPLRGEVFAALTGWLRQRLETPAKH
>Mature_301_residues
TAAGLPGARESAVTGAVPTETRQRMRDGTELLLRTWLPDPQRFAEPLGTVLLVHGLAEHSGRYGHVAAALCALGLRVRAY
DHRGHGASGGPRMVAPTPDSYLDDLAEIYDGAMRQWNELPIVLGHSMGGLIAARFATARVRPIRALVLSSPALALRLSNS
MLTMHRVLLALMPRIRVPNPIDARLLSHDVEVGRAYRTDPLVQGTISASVLETFIRGMPQALADAPRLEAPMLMLVGGAD
RIVDPEGSRIFFESAPEDLREMVWFDTGYHEIFNEAEPLRGEVFAALTGWLRQRLETPAKH

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI51242953, Length=278, Percent_Identity=32.3741007194245, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI6005786, Length=278, Percent_Identity=32.3741007194245, Blast_Score=130, Evalue=2e-30,
Organism=Escherichia coli, GI1787678, Length=266, Percent_Identity=28.5714285714286, Blast_Score=99, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022742
- InterPro:   IPR022744 [H]

Pfam domain/function: PF12146 Hydrolase_4; PF12147 Hydrolase_5 [H]

EC number: NA

Molecular weight: Translated: 33071; Mature: 32939

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAGLPGARESAVTGAVPTETRQRMRDGTELLLRTWLPDPQRFAEPLGTVLLVHGLAEH
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SGRYGHVAAALCALGLRVRAYDHRGHGASGGPRMVAPTPDSYLDDLAEIYDGAMRQWNEL
CCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCC
PIVLGHSMGGLIAARFATARVRPIRALVLSSPALALRLSNSMLTMHRVLLALMPRIRVPN
CEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECHHHHHHHHHHHHHHCCCCCCC
PIDARLLSHDVEVGRAYRTDPLVQGTISASVLETFIRGMPQALADAPRLEAPMLMLVGGA
CHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEECCC
DRIVDPEGSRIFFESAPEDLREMVWFDTGYHEIFNEAEPLRGEVFAALTGWLRQRLETPA
CCEECCCCCEEEECCCCHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
KH
CC
>Mature Secondary Structure 
TAAGLPGARESAVTGAVPTETRQRMRDGTELLLRTWLPDPQRFAEPLGTVLLVHGLAEH
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SGRYGHVAAALCALGLRVRAYDHRGHGASGGPRMVAPTPDSYLDDLAEIYDGAMRQWNEL
CCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCC
PIVLGHSMGGLIAARFATARVRPIRALVLSSPALALRLSNSMLTMHRVLLALMPRIRVPN
CEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECHHHHHHHHHHHHHHCCCCCCC
PIDARLLSHDVEVGRAYRTDPLVQGTISASVLETFIRGMPQALADAPRLEAPMLMLVGGA
CHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEECCC
DRIVDPEGSRIFFESAPEDLREMVWFDTGYHEIFNEAEPLRGEVFAALTGWLRQRLETPA
CCEECCCCCEEEECCCCHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
KH
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]