| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94312326
Identifier: 94312326
GI number: 94312326
Start: 3670650
End: 3671948
Strand: Reverse
Name: 94312326
Synonym: Rmet_3395
Alternate gene names: NA
Gene position: 3671948-3670650 (Counterclockwise)
Preceding gene: 94312332
Following gene: 94312314
Centisome position: 93.48
GC content: 66.74
Gene sequence:
>1299_bases ATGACCAATACTCCTCGCCAGGGCGCGACCCTGGCCGTGCTGATCGATGCCGACAACGCGGCGCCTGCCATCGTCGAAGG CCTGCTGGCCGAAGTGGCCAAGTACGGCGTTGCCGCCGTCAAGCGTATCTACGGCGACTGGACGCGTCCTAACCTGTCGG GCTGGAAGGACCGCCTGCTGGCGCACTCGATCCAGCCGATCCAGCAGTTCCGCTACACCGTGGGCAAGAACGCCACCGAC AGCGCGATGATCATCGACGCGATGGACCTGCTCTACACGGGCCGCTTCGACGGGTTCTGCATCGTCTCCAGCGATAGCGA TTTCACGCGCCTGGCATCGCGCATCCGCGAACAGGGCCTGACCGTCTACGGTTTCGGCGAACGCAAGACGCCGAAGCCGT TCGTGACCGCGTGCGACAAGTTCATCTACTCCGATGTGCTGCGCGCGGACGCCGATTCGGATTCCGACTCCGAGACCGGG AGCGCGCCGGCACGCAAGCGCACGACCCAGGAACTGCGCCAGGATTCGCGTCTGGTGCGGCTGCTGCAGAGCGCGTCGCA AGCCGTGTCCGACGAGGATGGCTGGTCCACGCTCGGTGGCATCGGCAACTACATCGCCAAGCAGGCCCCGGAATTCGATT CGCGTAACTATGGCTACGGCAAGCTTTCGGAGCTGGTGACGGCGACGAACCTGTTCGAGGTGGAAACGCGCAATGGCGGC AATAACAAGACCCTCTGGGTGCGGCTGAAGAAGCGCAACAAGGGTGAGGGTGGTGGGCAGCCGCAGCCGGCGCAACCGCA GCAGCAACAGCAGCCGCAGCAGCAGGGGCAGTCGTCCCAGCCGTCCCAGTCGCAGCAGCCATCGCAGCAAGCCCAGCCAC AGCAGCAGCGTCCGGCCCCGGCACCCGCACGACCCGTGCAGCCCGCGCCCGAACCCGTGGCAGTCATACCGGCAACCGAG CCCGCTCGGGTGACGGAAGAGGAAGACGACGACGCAGCCGGTTCCGCCTCAACGCTGATTCAGGAGGCCGTGGAGGTCTC CACCGAGAGGCCGAAGGCGGGCGGCAAGCGCGGCAAGCGTCCCGATGTCACGCTGAGCGATACCCCGTGGCCGATCGACC AGTCGGTGTTCTCGGCGCCCGGCGCGACCGTGCTGTCGGCACAGGTAGACGTGCCCGAGGAGACGAAGGCGGCAGCGCCT GCGGAGGAAGCCAAGAAGCCGGCGAAGAAGAAGCCTGCGGCAAAGAAGGCCGCACCGCGCAAGCGGGCGCCGGCGAAGAA GGCGGCTGCAGCGGAGTAA
Upstream 100 bases:
>100_bases TGCGGTGCATCCAAACGGCGCACGCGCGAGCCACGATGTAGACCGCGCGCCACCACGGCGTATCCTGTCGTGGTGCAACC CGCCCCATCCAACTCCGACC
Downstream 100 bases:
>100_bases GCGCCGTCGTGGTCTGACGTCGCTGTCCTCTCCTGCAGGCGGGAGAGGACGAGAACCTCGTGCAGATTCAACGCAATCGG TTTGTTCCTCTCTCCCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MTNTPRQGATLAVLIDADNAAPAIVEGLLAEVAKYGVAAVKRIYGDWTRPNLSGWKDRLLAHSIQPIQQFRYTVGKNATD SAMIIDAMDLLYTGRFDGFCIVSSDSDFTRLASRIREQGLTVYGFGERKTPKPFVTACDKFIYSDVLRADADSDSDSETG SAPARKRTTQELRQDSRLVRLLQSASQAVSDEDGWSTLGGIGNYIAKQAPEFDSRNYGYGKLSELVTATNLFEVETRNGG NNKTLWVRLKKRNKGEGGGQPQPAQPQQQQQPQQQGQSSQPSQSQQPSQQAQPQQQRPAPAPARPVQPAPEPVAVIPATE PARVTEEEDDDAAGSASTLIQEAVEVSTERPKAGGKRGKRPDVTLSDTPWPIDQSVFSAPGATVLSAQVDVPEETKAAAP AEEAKKPAKKKPAAKKAAPRKRAPAKKAAAAE
Sequences:
>Translated_432_residues MTNTPRQGATLAVLIDADNAAPAIVEGLLAEVAKYGVAAVKRIYGDWTRPNLSGWKDRLLAHSIQPIQQFRYTVGKNATD SAMIIDAMDLLYTGRFDGFCIVSSDSDFTRLASRIREQGLTVYGFGERKTPKPFVTACDKFIYSDVLRADADSDSDSETG SAPARKRTTQELRQDSRLVRLLQSASQAVSDEDGWSTLGGIGNYIAKQAPEFDSRNYGYGKLSELVTATNLFEVETRNGG NNKTLWVRLKKRNKGEGGGQPQPAQPQQQQQPQQQGQSSQPSQSQQPSQQAQPQQQRPAPAPARPVQPAPEPVAVIPATE PARVTEEEDDDAAGSASTLIQEAVEVSTERPKAGGKRGKRPDVTLSDTPWPIDQSVFSAPGATVLSAQVDVPEETKAAAP AEEAKKPAKKKPAAKKAAPRKRAPAKKAAAAE >Mature_431_residues TNTPRQGATLAVLIDADNAAPAIVEGLLAEVAKYGVAAVKRIYGDWTRPNLSGWKDRLLAHSIQPIQQFRYTVGKNATDS AMIIDAMDLLYTGRFDGFCIVSSDSDFTRLASRIREQGLTVYGFGERKTPKPFVTACDKFIYSDVLRADADSDSDSETGS APARKRTTQELRQDSRLVRLLQSASQAVSDEDGWSTLGGIGNYIAKQAPEFDSRNYGYGKLSELVTATNLFEVETRNGGN NKTLWVRLKKRNKGEGGGQPQPAQPQQQQQPQQQGQSSQPSQSQQPSQQAQPQQQRPAPAPARPVQPAPEPVAVIPATEP ARVTEEEDDDAAGSASTLIQEAVEVSTERPKAGGKRGKRPDVTLSDTPWPIDQSVFSAPGATVLSAQVDVPEETKAAAPA EEAKKPAKKKPAAKKAAPRKRAPAKKAAAAE
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46558; Mature: 46427
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTPRQGATLAVLIDADNAAPAIVEGLLAEVAKYGVAAVKRIYGDWTRPNLSGWKDRLL CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH AHSIQPIQQFRYTVGKNATDSAMIIDAMDLLYTGRFDGFCIVSSDSDFTRLASRIREQGL HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCC TVYGFGERKTPKPFVTACDKFIYSDVLRADADSDSDSETGSAPARKRTTQELRQDSRLVR EEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LLQSASQAVSDEDGWSTLGGIGNYIAKQAPEFDSRNYGYGKLSELVTATNLFEVETRNGG HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCC NNKTLWVRLKKRNKGEGGGQPQPAQPQQQQQPQQQGQSSQPSQSQQPSQQAQPQQQRPAP CCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHCCCC APARPVQPAPEPVAVIPATEPARVTEEEDDDAAGSASTLIQEAVEVSTERPKAGGKRGKR CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC PDVTLSDTPWPIDQSVFSAPGATVLSAQVDVPEETKAAAPAEEAKKPAKKKPAAKKAAPR CCCEECCCCCCCCHHHHCCCCCEEEEEECCCCHHHHHCCCHHHHHCCHHCCCCHHHCCCC KRAPAKKAAAAE CCCCHHHHCCCC >Mature Secondary Structure TNTPRQGATLAVLIDADNAAPAIVEGLLAEVAKYGVAAVKRIYGDWTRPNLSGWKDRLL CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH AHSIQPIQQFRYTVGKNATDSAMIIDAMDLLYTGRFDGFCIVSSDSDFTRLASRIREQGL HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCC TVYGFGERKTPKPFVTACDKFIYSDVLRADADSDSDSETGSAPARKRTTQELRQDSRLVR EEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LLQSASQAVSDEDGWSTLGGIGNYIAKQAPEFDSRNYGYGKLSELVTATNLFEVETRNGG HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCC NNKTLWVRLKKRNKGEGGGQPQPAQPQQQQQPQQQGQSSQPSQSQQPSQQAQPQQQRPAP CCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHCCCC APARPVQPAPEPVAVIPATEPARVTEEEDDDAAGSASTLIQEAVEVSTERPKAGGKRGKR CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC PDVTLSDTPWPIDQSVFSAPGATVLSAQVDVPEETKAAAPAEEAKKPAKKKPAAKKAAPR CCCEECCCCCCCCHHHHCCCCCEEEEEECCCCHHHHHCCCHHHHHCCHHCCCCHHHCCCC KRAPAKKAAAAE CCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA