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The map label for this gene is yrbD [C]

Identifier: 94312188

GI number: 94312188

Start: 3527745

End: 3528284

Strand: Reverse

Name: yrbD [C]

Synonym: Rmet_3257

Alternate gene names: 94312188

Gene position: 3528284-3527745 (Counterclockwise)

Preceding gene: 94312189

Following gene: 94312187

Centisome position: 89.82

GC content: 64.63

Gene sequence:

>540_bases
ATGAAGAAGACTACGCTCGACTACTGGGTAGGGGTGTTCGTGGTACTGGGCTTTGCCGCGCTGCTGTTCCTGGCGCTCAA
GGCCGGCAACATGAGCAGCTTCTCGTTCCAGGAGACCTACACGGTTACCGCGCAGTTCGACAACATCGGCGGACTGAAGC
CGCGCGCGCCGATCAAGAGCGCGGGCGTGGTGGTTGGCCGCGTCGCATCCATCCGCCTCGACGACAAGAACTACATGGCC
ACGGTCGAGCTGAACCTCGACAAGCGCTACCAGTTCCCGAAGGACACGTCGGCCAAGATCCTGACGTCGGGCCTGCTCGG
CGAGCAGTACATCGGCCTCGAGGCCGGTGGCGACACGGCGATGCTGGCGCAGGGCGGCAAGATCACGATGACCCAGTCGG
CGGTGGTGCTTGAAAACCTGATCGGCCAGTTCCTCTACAACAAGGCGGCCGATGCCGGCGCTGGTGGCGGATCGACCTCG
TCAGGCTCGGGTGCCGGAGCGCTGCCTGCAGCGCCCGGTACTGGCGGGAGCGGCAAATGA

Upstream 100 bases:

>100_bases
TGGTACTGGCCTCGCTGGCCGTGCTGGGACTGGATTTCCTGCTGACCGCGCTGATGTTCAGCTAGGCCAGCCGCACCGAT
CGCATGAGAAAGAGAATCGC

Downstream 100 bases:

>100_bases
TGGTCTTGCAGCGCCTGGCCGTTGCATCGCTGGCGGCGCTTGCCCTGGCGGGTTGCGCAACGGGCCCGAACGCGAATCCC
GCGGATCCGCTCGAGCCGTT

Product: toluene ABC transporter membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKKTTLDYWVGVFVVLGFAALLFLALKAGNMSSFSFQETYTVTAQFDNIGGLKPRAPIKSAGVVVGRVASIRLDDKNYMA
TVELNLDKRYQFPKDTSAKILTSGLLGEQYIGLEAGGDTAMLAQGGKITMTQSAVVLENLIGQFLYNKAADAGAGGGSTS
SGSGAGALPAAPGTGGSGK

Sequences:

>Translated_179_residues
MKKTTLDYWVGVFVVLGFAALLFLALKAGNMSSFSFQETYTVTAQFDNIGGLKPRAPIKSAGVVVGRVASIRLDDKNYMA
TVELNLDKRYQFPKDTSAKILTSGLLGEQYIGLEAGGDTAMLAQGGKITMTQSAVVLENLIGQFLYNKAADAGAGGGSTS
SGSGAGALPAAPGTGGSGK
>Mature_179_residues
MKKTTLDYWVGVFVVLGFAALLFLALKAGNMSSFSFQETYTVTAQFDNIGGLKPRAPIKSAGVVVGRVASIRLDDKNYMA
TVELNLDKRYQFPKDTSAKILTSGLLGEQYIGLEAGGDTAMLAQGGKITMTQSAVVLENLIGQFLYNKAADAGAGGGSTS
SGSGAGALPAAPGTGGSGK

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaD family [H]

Homologues:

Organism=Escherichia coli, GI1789584, Length=179, Percent_Identity=46.927374301676, Blast_Score=141, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003399 [H]

Pfam domain/function: PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 18438; Mature: 18438

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTTLDYWVGVFVVLGFAALLFLALKAGNMSSFSFQETYTVTAQFDNIGGLKPRAPIKS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECEEEEEEEEECCCCCCCCCCCCCC
AGVVVGRVASIRLDDKNYMATVELNLDKRYQFPKDTSAKILTSGLLGEQYIGLEAGGDTA
CCEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCEE
MLAQGGKITMTQSAVVLENLIGQFLYNKAADAGAGGGSTSSGSGAGALPAAPGTGGSGK
EEECCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKTTLDYWVGVFVVLGFAALLFLALKAGNMSSFSFQETYTVTAQFDNIGGLKPRAPIKS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECEEEEEEEEECCCCCCCCCCCCCC
AGVVVGRVASIRLDDKNYMATVELNLDKRYQFPKDTSAKILTSGLLGEQYIGLEAGGDTA
CCEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCEE
MLAQGGKITMTQSAVVLENLIGQFLYNKAADAGAGGGSTSSGSGAGALPAAPGTGGSGK
EEECCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]