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The map label for this gene is sspB [H]

Identifier: 94312157

GI number: 94312157

Start: 3502976

End: 3503473

Strand: Reverse

Name: sspB [H]

Synonym: Rmet_3226

Alternate gene names: 94312157

Gene position: 3503473-3502976 (Counterclockwise)

Preceding gene: 94312158

Following gene: 94312155

Centisome position: 89.19

GC content: 60.84

Gene sequence:

>498_bases
ATGTCTGAAACATCCACCAAGCCCTATCTGATCCGGGCCATTTACGAATGGTGTACGGATAACGGCTTCACGCCGTACAT
CGCAGTCTTCGTCGACGGCAATACCAGCGTGCCGCGCGAATTCGTGAAGAACAACGAAATCGTGCTGAACGTGAGCTTCG
ACGCGACCAGCGGTCTCGATATGGGGAACGAGTGGATTACGTTCAGCGCGCGCTTCGGTGGCGTGTCGCGCAAGATCGAA
GTGCCCGTGGATAACGTGCTGGCGATCTACGCGCGTGAGAACGGCCAAGGCATGGCGTTCCCGGTGGAACGTAGTATCCC
CGAAACCCAGGCTGCGACGGAGCGGGAGAACAACCCGCCGCCGAAGCTCGCCTCGGTCGACAGCGATACGCCGGCGCCGG
TAACGGCGGAAGAGGGCGTCTCTCCTGACGACGACCCGACGCCGCCGTCCGTGCCACGCATCGGCGGGAAGAAGCCTTCA
CTGAAGGTGGTCAAATAA

Upstream 100 bases:

>100_bases
GAGCGTATCTTCAGCCGCCCGGCCTACATCGAAGCTCTGACCCCGTCTGAAAAGGTGATGCGTCGCTAAGACACATCCGA
CGTCGCCACCGCAAAGCGTA

Downstream 100 bases:

>100_bases
GCCATCGTCAAAGCGGTCCGCTTGAAGTAGAATCGCGGACTGCACCAAAAATGCCGGCTTAGCTCATCAGGTAGAGCAGT
TGATTTGTAATCATCAGGTG

Product: ClpXP protease specificity-enhancing factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MSETSTKPYLIRAIYEWCTDNGFTPYIAVFVDGNTSVPREFVKNNEIVLNVSFDATSGLDMGNEWITFSARFGGVSRKIE
VPVDNVLAIYARENGQGMAFPVERSIPETQAATERENNPPPKLASVDSDTPAPVTAEEGVSPDDDPTPPSVPRIGGKKPS
LKVVK

Sequences:

>Translated_165_residues
MSETSTKPYLIRAIYEWCTDNGFTPYIAVFVDGNTSVPREFVKNNEIVLNVSFDATSGLDMGNEWITFSARFGGVSRKIE
VPVDNVLAIYARENGQGMAFPVERSIPETQAATERENNPPPKLASVDSDTPAPVTAEEGVSPDDDPTPPSVPRIGGKKPS
LKVVK
>Mature_164_residues
SETSTKPYLIRAIYEWCTDNGFTPYIAVFVDGNTSVPREFVKNNEIVLNVSFDATSGLDMGNEWITFSARFGGVSRKIEV
PVDNVLAIYARENGQGMAFPVERSIPETQAATERENNPPPKLASVDSDTPAPVTAEEGVSPDDDPTPPSVPRIGGKKPSL
KVVK

Specific function: Seems to act in concert with sspA in the regulation of several proteins during exponential and stationary-phase growth. The exact function of sspB is not yet known [H]

COG id: COG2969

COG function: function code R; Stringent starvation protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789623, Length=128, Percent_Identity=41.40625, Blast_Score=100, Evalue=6e-23,

Paralogues:

None

Copy number: 297 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007481 [H]

Pfam domain/function: PF04386 SspB [H]

EC number: NA

Molecular weight: Translated: 17931; Mature: 17800

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETSTKPYLIRAIYEWCTDNGFTPYIAVFVDGNTSVPREFVKNNEIVLNVSFDATSGLD
CCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHCCCCEEEEEECCCCCCCC
MGNEWITFSARFGGVSRKIEVPVDNVLAIYARENGQGMAFPVERSIPETQAATERENNPP
CCCEEEEEEECCCCCCEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHCCCCCCC
PKLASVDSDTPAPVTAEEGVSPDDDPTPPSVPRIGGKKPSLKVVK
CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
>Mature Secondary Structure 
SETSTKPYLIRAIYEWCTDNGFTPYIAVFVDGNTSVPREFVKNNEIVLNVSFDATSGLD
CCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHCCCCEEEEEECCCCCCCC
MGNEWITFSARFGGVSRKIEVPVDNVLAIYARENGQGMAFPVERSIPETQAATERENNPP
CCCEEEEEEECCCCCCEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHCCCCCCC
PKLASVDSDTPAPVTAEEGVSPDDDPTPPSVPRIGGKKPSLKVVK
CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]