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The map label for this gene is 94312155

Identifier: 94312155

GI number: 94312155

Start: 3499615

End: 3500514

Strand: Reverse

Name: 94312155

Synonym: Rmet_3224

Alternate gene names: NA

Gene position: 3500514-3499615 (Counterclockwise)

Preceding gene: 94312157

Following gene: 94312152

Centisome position: 89.11

GC content: 60.22

Gene sequence:

>900_bases
ATGGATGGAAAACTGGCAAGCTCGGTGAGGGTGTGCCTTGCTGCGGTAACGGCCGTTATCGCAGTAGCGGCCTGTGGTGG
TGGCGGGGACGACAATTCGGGCGGCACGGTGATTCGGGTGACGGAAGCCGCCACGCTTTCGACGAAGCAGGTGAACAACA
GTATGGTCGCCAATCCAGTCCGCTGGATGCCATCGGTAACCGACACGTGGCAGCTTCAACTCCAGGGAAAACTCGATACG
AGTTACAACGTCGCGGTCTACGTGCTCGACCTGTTCGACACGCCACCGTCGACCATTGCATCGCTCAAGGAGCAGGGCAG
GCGAGTCGTCTGCTATTTCTCCGCGGGAAGCAGCGAGGACTGGCGCCCCGATTTCCAGAGTTTCCAGCCCTCGGATATGG
GCAACGTACTCAGCGGCTGGGCGGGCGAGCGCTGGCTGGATACGCGATCCAGCAATGTGCGCGGCATCATGGCCGCGCGT
ATGGATTTGGCGGTCTCGAAGGGGTGCGACGGCGTTGATCCCGACAATGTCGATGGATATACCAATAACACCGGCCTGCC
GCTCACGGCGGACACCCAGCTCGACTACAACCGCTTTCTGGCTAACGCGGCACATGCGCGCGGTTTGGCGATCGGATTGA
AGAACGACGTCGGCCAGCTCACCGATCTGGCATCGTCATTTGATTTCGCGATTAACGAGCAATGCTTCCAGTACAACGAG
TGCGGCGGATACTCGGCCTTCACGGCGCAAGGCAAGCCGGTGTTCAACGTGGAATATGCGACGAAGTGGAAGGATGCGAC
AAAGCGGCCGGCGTTATGCGCCAACGCTGCCGCGCTGAGTATCCGGACGCTGGTGCTGCCGCTGGCGCTGAACGACAAGT
ATCGGTATAGCTGCGACTGA

Upstream 100 bases:

>100_bases
CCACGAAAGACACTTCCCGTGTGTTGGCCGACTGCGCGGGCGGAAGAATATAGCGGCCAATTGAAGGTTTTGTTGGGGTT
CAACTGGAAGGGCAATTGAA

Downstream 100 bases:

>100_bases
TTCTGGGAGATTCTCAGGCGCCGCCGCGCTTTTCCATCTCTCGCCACGCCAGGAATAATCGCGTGTCGAATTCCAGTTGG
TGGTAGCGCGGCTCCATATA

Product: hypothetical protein

Products: NA

Alternate protein names: Secreted Protein; Endo Alpha-1 4 Polygalactosaminidase Precusor; Lipoprotein

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MDGKLASSVRVCLAAVTAVIAVAACGGGGDDNSGGTVIRVTEAATLSTKQVNNSMVANPVRWMPSVTDTWQLQLQGKLDT
SYNVAVYVLDLFDTPPSTIASLKEQGRRVVCYFSAGSSEDWRPDFQSFQPSDMGNVLSGWAGERWLDTRSSNVRGIMAAR
MDLAVSKGCDGVDPDNVDGYTNNTGLPLTADTQLDYNRFLANAAHARGLAIGLKNDVGQLTDLASSFDFAINEQCFQYNE
CGGYSAFTAQGKPVFNVEYATKWKDATKRPALCANAAALSIRTLVLPLALNDKYRYSCD

Sequences:

>Translated_299_residues
MDGKLASSVRVCLAAVTAVIAVAACGGGGDDNSGGTVIRVTEAATLSTKQVNNSMVANPVRWMPSVTDTWQLQLQGKLDT
SYNVAVYVLDLFDTPPSTIASLKEQGRRVVCYFSAGSSEDWRPDFQSFQPSDMGNVLSGWAGERWLDTRSSNVRGIMAAR
MDLAVSKGCDGVDPDNVDGYTNNTGLPLTADTQLDYNRFLANAAHARGLAIGLKNDVGQLTDLASSFDFAINEQCFQYNE
CGGYSAFTAQGKPVFNVEYATKWKDATKRPALCANAAALSIRTLVLPLALNDKYRYSCD
>Mature_299_residues
MDGKLASSVRVCLAAVTAVIAVAACGGGGDDNSGGTVIRVTEAATLSTKQVNNSMVANPVRWMPSVTDTWQLQLQGKLDT
SYNVAVYVLDLFDTPPSTIASLKEQGRRVVCYFSAGSSEDWRPDFQSFQPSDMGNVLSGWAGERWLDTRSSNVRGIMAAR
MDLAVSKGCDGVDPDNVDGYTNNTGLPLTADTQLDYNRFLANAAHARGLAIGLKNDVGQLTDLASSFDFAINEQCFQYNE
CGGYSAFTAQGKPVFNVEYATKWKDATKRPALCANAAALSIRTLVLPLALNDKYRYSCD

Specific function: Unknown

COG id: COG3868

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32161; Mature: 32161

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGKLASSVRVCLAAVTAVIAVAACGGGGDDNSGGTVIRVTEAATLSTKQVNNSMVANPV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEHHHHHCCCHHCCCH
RWMPSVTDTWQLQLQGKLDTSYNVAVYVLDLFDTPPSTIASLKEQGRRVVCYFSAGSSED
HHCCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCHHHHHHHHHCCCEEEEEEECCCCCC
WRPDFQSFQPSDMGNVLSGWAGERWLDTRSSNVRGIMAARMDLAVSKGCDGVDPDNVDGY
CCCCHHCCCCCCHHHHHHCCCCCCEECCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCC
TNNTGLPLTADTQLDYNRFLANAAHARGLAIGLKNDVGQLTDLASSFDFAINEQCFQYNE
CCCCCCCEEECCCCCHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHCC
CGGYSAFTAQGKPVFNVEYATKWKDATKRPALCANAAALSIRTLVLPLALNDKYRYSCD
CCCEEEEECCCCEEEEEEHHHCCCCCCCCCCHHHHHHHHEEEEEEEEEEECCCEEECCC
>Mature Secondary Structure
MDGKLASSVRVCLAAVTAVIAVAACGGGGDDNSGGTVIRVTEAATLSTKQVNNSMVANPV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEHHHHHCCCHHCCCH
RWMPSVTDTWQLQLQGKLDTSYNVAVYVLDLFDTPPSTIASLKEQGRRVVCYFSAGSSED
HHCCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCHHHHHHHHHCCCEEEEEEECCCCCC
WRPDFQSFQPSDMGNVLSGWAGERWLDTRSSNVRGIMAARMDLAVSKGCDGVDPDNVDGY
CCCCHHCCCCCCHHHHHHCCCCCCEECCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCC
TNNTGLPLTADTQLDYNRFLANAAHARGLAIGLKNDVGQLTDLASSFDFAINEQCFQYNE
CCCCCCCEEECCCCCHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHCC
CGGYSAFTAQGKPVFNVEYATKWKDATKRPALCANAAALSIRTLVLPLALNDKYRYSCD
CCCEEEEECCCCEEEEEEHHHCCCCCCCCCCHHHHHHHHEEEEEEEEEEECCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA