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The map label for this gene is 94311986

Identifier: 94311986

GI number: 94311986

Start: 3311718

End: 3312704

Strand: Reverse

Name: 94311986

Synonym: Rmet_3055

Alternate gene names: NA

Gene position: 3312704-3311718 (Counterclockwise)

Preceding gene: 94311987

Following gene: 94311985

Centisome position: 84.33

GC content: 66.26

Gene sequence:

>987_bases
GTGGCCGGCGTTTCGATCGATTCCTGCCGCCGTCCGCCCATCCCAATCGTGAACGCCGTCCTTCCTGCTCCCCGTCTCCC
GCGCCATCCGCGCGAATGGTGGCAATCCAGCAGCACGCTGACCAAGGCCCTGGCCATCTCCGTGGCCGTGCACGCGCTGT
TGCTGATGGTGCGGGTTGCAGCGCCCGAGGTGTTCGAGATCAAGCGTTCCGACCCGCAGCTCGACGTCGTGCTGGTCAAT
TCGAAATCGGCTGTGAAGCCGCGCAATCCGACCGTGCTGGCGCAGGCCAATCTCGACGGTGGCGGCGAGCATGACGCCCA
GCGCGCTACCACGCCGCTGCCCGCGCAGACCGAATCGAAGGAGGGCGACCTCATCAAGATGACGCAGCGGCGCGTCGAGC
AACTCGAGGAAGAGCAGCGCCGGCTGATGACGCAATCGCGCGAGGCGGCGCCCGCTGTGCGCAGCCAGCCGGTCAAGCCA
GGCGAGCAGCGCTCCGACCAGCCCACGCGCGGCCAGGACGACCGCACGTCAAACGATGAAATGGCCCGGCTCGAAGCCGA
GATCGGCCGTAATCTCGAGCACTACGCCAAGCGCCCGAAGCGGATGCAGCTGACCGCGACCAGCGCACAGGGCGTTGACT
ACGCACAGTATTACGACCGCCTGCGCCGCAAGATCGAGACGCGGGGCACGAGCGATTTCCCGCAGCGCAATGGTAAGCCG
ATCTATGGGCAACTGATCCTCGTGATCAACGTGAATCGCCAGGGCAAGCTTGGCTACAACCGCGACGGCTACAACGTCGA
GGCCATCGACGTGGCCAAGAGCTCCGGCGACCCGGCGCTCGACCGCCAGGCCGTGGCCATTGTGCGTGCGGCCGCGCCGT
TCGGGGCGTTCACGGCGGAGATGCAGGCGAAGCAGGATATCCTCGAAGTCGTTTCCACTTTCAAGTTCACCCGCAGCGGG
CTCGATGTCCGCCTGCAAGGCCGCTGA

Upstream 100 bases:

>100_bases
ACTGGCGCCAATCCGGCTGCCTGAGTCTTCGTTGAGTCTTCGGTAAACAGGTCGACTCCCTTACAATCGAAACCTGTTCC
GGCCGCCCCCCGACAGTGGG

Downstream 100 bases:

>100_bases
TGACCGCAGACCAGAATTCCCAGCCCAACACCGCCGAACCTGCCGATAGCGTCGACCGCTACGTGGTGGTGGGCAATCCG
ATTTCGCACAGCCGCTCGCC

Product: putative TonB-like protein

Products: NA

Alternate protein names: NB Protein; NB-Like Protein; NB Family C-Terminal Domain Protein; NB-Like; NB C-Terminal; NB Domain-Containing Protein; Periplasmic Protein nB Links Inner And Outer Membranes; NB-Related Transmembrane Protein; Nb Family Protein; NB Domain Protein; NB-Like Domain-Containing Protein; Periplasmic Protein/ Biopolymer Transport; NB Family C-Terminal Domain-Containing; Nb Protein

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MAGVSIDSCRRPPIPIVNAVLPAPRLPRHPREWWQSSSTLTKALAISVAVHALLLMVRVAAPEVFEIKRSDPQLDVVLVN
SKSAVKPRNPTVLAQANLDGGGEHDAQRATTPLPAQTESKEGDLIKMTQRRVEQLEEEQRRLMTQSREAAPAVRSQPVKP
GEQRSDQPTRGQDDRTSNDEMARLEAEIGRNLEHYAKRPKRMQLTATSAQGVDYAQYYDRLRRKIETRGTSDFPQRNGKP
IYGQLILVINVNRQGKLGYNRDGYNVEAIDVAKSSGDPALDRQAVAIVRAAAPFGAFTAEMQAKQDILEVVSTFKFTRSG
LDVRLQGR

Sequences:

>Translated_328_residues
MAGVSIDSCRRPPIPIVNAVLPAPRLPRHPREWWQSSSTLTKALAISVAVHALLLMVRVAAPEVFEIKRSDPQLDVVLVN
SKSAVKPRNPTVLAQANLDGGGEHDAQRATTPLPAQTESKEGDLIKMTQRRVEQLEEEQRRLMTQSREAAPAVRSQPVKP
GEQRSDQPTRGQDDRTSNDEMARLEAEIGRNLEHYAKRPKRMQLTATSAQGVDYAQYYDRLRRKIETRGTSDFPQRNGKP
IYGQLILVINVNRQGKLGYNRDGYNVEAIDVAKSSGDPALDRQAVAIVRAAAPFGAFTAEMQAKQDILEVVSTFKFTRSG
LDVRLQGR
>Mature_327_residues
AGVSIDSCRRPPIPIVNAVLPAPRLPRHPREWWQSSSTLTKALAISVAVHALLLMVRVAAPEVFEIKRSDPQLDVVLVNS
KSAVKPRNPTVLAQANLDGGGEHDAQRATTPLPAQTESKEGDLIKMTQRRVEQLEEEQRRLMTQSREAAPAVRSQPVKPG
EQRSDQPTRGQDDRTSNDEMARLEAEIGRNLEHYAKRPKRMQLTATSAQGVDYAQYYDRLRRKIETRGTSDFPQRNGKPI
YGQLILVINVNRQGKLGYNRDGYNVEAIDVAKSSGDPALDRQAVAIVRAAAPFGAFTAEMQAKQDILEVVSTFKFTRSGL
DVRLQGR

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36463; Mature: 36332

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGVSIDSCRRPPIPIVNAVLPAPRLPRHPREWWQSSSTLTKALAISVAVHALLLMVRVA
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
APEVFEIKRSDPQLDVVLVNSKSAVKPRNPTVLAQANLDGGGEHDAQRATTPLPAQTESK
CCHHEEECCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCHHHCCCCCCCCCCCC
EGDLIKMTQRRVEQLEEEQRRLMTQSREAAPAVRSQPVKPGEQRSDQPTRGQDDRTSNDE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
MARLEAEIGRNLEHYAKRPKRMQLTATSAQGVDYAQYYDRLRRKIETRGTSDFPQRNGKP
HHHHHHHHCCCHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
IYGQLILVINVNRQGKLGYNRDGYNVEAIDVAKSSGDPALDRQAVAIVRAAAPFGAFTAE
EEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHH
MQAKQDILEVVSTFKFTRSGLDVRLQGR
HHHHHHHHHHHHHHHHHHCCCCEEEECC
>Mature Secondary Structure 
AGVSIDSCRRPPIPIVNAVLPAPRLPRHPREWWQSSSTLTKALAISVAVHALLLMVRVA
CCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
APEVFEIKRSDPQLDVVLVNSKSAVKPRNPTVLAQANLDGGGEHDAQRATTPLPAQTESK
CCHHEEECCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCHHHCCCCCCCCCCCC
EGDLIKMTQRRVEQLEEEQRRLMTQSREAAPAVRSQPVKPGEQRSDQPTRGQDDRTSNDE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
MARLEAEIGRNLEHYAKRPKRMQLTATSAQGVDYAQYYDRLRRKIETRGTSDFPQRNGKP
HHHHHHHHCCCHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
IYGQLILVINVNRQGKLGYNRDGYNVEAIDVAKSSGDPALDRQAVAIVRAAAPFGAFTAE
EEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHH
MQAKQDILEVVSTFKFTRSGLDVRLQGR
HHHHHHHHHHHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA