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The map label for this gene is hmzB

Identifier: 94311944

GI number: 94311944

Start: 3270512

End: 3271735

Strand: Reverse

Name: hmzB

Synonym: Rmet_3012

Alternate gene names: NA

Gene position: 3271735-3270512 (Counterclockwise)

Preceding gene: 94311947

Following gene: 94311943

Centisome position: 83.29

GC content: 66.18

Gene sequence:

>1224_bases
ATGAGCTTCCCGACCTTGAAAGCGGCGGGCACCTCCAGCCGAACCAAGACCTTGGCCCTGTCCGCCGTCGGTGTGGCAGT
TCTGGCTGCCGTAGGGTACGGCTGGTGGGCTTGGGCAACCCAGCAGACAACCGTAGCCGATAAAGACGCGAGCGAAGCTG
TCGCCCAACCGAACGCTGGCGGCGTTCACCTCAATGCCACTCAGCTTCGCGCGCAGGGTGTGGAAACCGCACTCGTCAAG
GATGCTGCAGTGATACCGCTGGATAGCTTACCCGCGCAGACGGTGGCACCACTCTCGGCTAGCGCGCAGGTCGTGGCGCC
ATATGGCGGTGTGGTGACGCGCGTTCTGGTCGATGAAGGCGCCGCAGTGCGCCAAGGTCAGGCACTGGCGCGCATCCAGA
GCAAGGACGTTCTGGCGTCTCAGGCTGATCTGGCGCGTGCCCGCACCGAAGCGGCGGTGGCTACGGCGCAGGCCCGGCGC
GATGCCACGCTCTTGGCCGAGGGCATCATCCCAGCCACGCGCAACGAGCAAACCCAGGCGCGCGCGGCGGCTGCGCAAAG
TACGTTGCAAGAGGCCAATGGCGCCCTCGCACGGCTTCGACCCGTTAGCGGCGGGCAGGCCGGCGAGTATGAATTGCTGG
CGCCTTTGTCCGGGCGGGTGATGCGTCGTCACCTGAGCCTCGGGCAGGCGGTCGCGCCGCTCGACATCGCCTTCATAGTG
GCTCAGCCTGGCCCGCTGGATGTCAGCGTCGCGGTTCCGCTGCGCTGGCGCTCGGATCTCCACCCAGGCTTGGAAGTGCG
TCTTCCCGATGGCACGATCGCTCGCGTGACGGCTGTTGGTGGCGACACTGACCTCAGTAGTCAGAGCCTGCGGGTACGTG
CCCGCGTCGATGCAGATCAGGCAGGGGCAGACCGCTATGCGGCCGGGCAGCAGATCAGTGTCGCGCTGTTGCTGCCAGCA
CCGCAGGGCACCTTGAGCGTGCCATCGTCCGCACTGCTGCCAGCGGGCAGCGCCCACGTGGTCTACGTTGCTGAGCCGTC
ATCGCAAGACAAGCACGGCGACCTACGCGTCCGCGCTGTTCCGGTGCGACTGCTGGGGCAAGACGAATCAGATGCGTCAA
GCGCCGTGCGTGCCGTCTCGCCAGACACTGCGCCGCTTGCGGCAGGCATGCAGGTCGTCGTGCGCGGTACGGCACTGCTT
AAATCCATGATTCCATTGCAATGA

Upstream 100 bases:

>100_bases
TTCGCCTCATTAACCTCGCGCACCGCTTCATATGCGACGAATTTTCAATTCGCGCTGTGTGCTCTCTACTCTGCTCTACG
TCATTTGGGGCGGCACAAGC

Downstream 100 bases:

>100_bases
GGGGCGACCACGCATGTTGTCCCGTCTGATTGAATTTTCCCTGCGCCAACGTGCGCTGGTACTGCTTGGCGTGCTGGCTT
TGGCGGGTGCGGGCCTGGCG

Product: cation/multidrug efflux system, membrane-fusion component

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; RND Family Efflux Transporter MFP Subunit

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MSFPTLKAAGTSSRTKTLALSAVGVAVLAAVGYGWWAWATQQTTVADKDASEAVAQPNAGGVHLNATQLRAQGVETALVK
DAAVIPLDSLPAQTVAPLSASAQVVAPYGGVVTRVLVDEGAAVRQGQALARIQSKDVLASQADLARARTEAAVATAQARR
DATLLAEGIIPATRNEQTQARAAAAQSTLQEANGALARLRPVSGGQAGEYELLAPLSGRVMRRHLSLGQAVAPLDIAFIV
AQPGPLDVSVAVPLRWRSDLHPGLEVRLPDGTIARVTAVGGDTDLSSQSLRVRARVDADQAGADRYAAGQQISVALLLPA
PQGTLSVPSSALLPAGSAHVVYVAEPSSQDKHGDLRVRAVPVRLLGQDESDASSAVRAVSPDTAPLAAGMQVVVRGTALL
KSMIPLQ

Sequences:

>Translated_407_residues
MSFPTLKAAGTSSRTKTLALSAVGVAVLAAVGYGWWAWATQQTTVADKDASEAVAQPNAGGVHLNATQLRAQGVETALVK
DAAVIPLDSLPAQTVAPLSASAQVVAPYGGVVTRVLVDEGAAVRQGQALARIQSKDVLASQADLARARTEAAVATAQARR
DATLLAEGIIPATRNEQTQARAAAAQSTLQEANGALARLRPVSGGQAGEYELLAPLSGRVMRRHLSLGQAVAPLDIAFIV
AQPGPLDVSVAVPLRWRSDLHPGLEVRLPDGTIARVTAVGGDTDLSSQSLRVRARVDADQAGADRYAAGQQISVALLLPA
PQGTLSVPSSALLPAGSAHVVYVAEPSSQDKHGDLRVRAVPVRLLGQDESDASSAVRAVSPDTAPLAAGMQVVVRGTALL
KSMIPLQ
>Mature_406_residues
SFPTLKAAGTSSRTKTLALSAVGVAVLAAVGYGWWAWATQQTTVADKDASEAVAQPNAGGVHLNATQLRAQGVETALVKD
AAVIPLDSLPAQTVAPLSASAQVVAPYGGVVTRVLVDEGAAVRQGQALARIQSKDVLASQADLARARTEAAVATAQARRD
ATLLAEGIIPATRNEQTQARAAAAQSTLQEANGALARLRPVSGGQAGEYELLAPLSGRVMRRHLSLGQAVAPLDIAFIVA
QPGPLDVSVAVPLRWRSDLHPGLEVRLPDGTIARVTAVGGDTDLSSQSLRVRARVDADQAGADRYAAGQQISVALLLPAP
QGTLSVPSSALLPAGSAHVVYVAEPSSQDKHGDLRVRAVPVRLLGQDESDASSAVRAVSPDTAPLAAGMQVVVRGTALLK
SMIPLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41805; Mature: 41674

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFPTLKAAGTSSRTKTLALSAVGVAVLAAVGYGWWAWATQQTTVADKDASEAVAQPNAG
CCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCEEEEECCCCEECCCCCHHHHCCCCCC
GVHLNATQLRAQGVETALVKDAAVIPLDSLPAQTVAPLSASAQVVAPYGGVVTRVLVDEG
CEEEEHHHHHHCCCHHHHHCCCEEECCCCCCCHHCCCCCCCCEEEECCCCEEEEEEECCC
AAVRQGQALARIQSKDVLASQADLARARTEAAVATAQARRDATLLAEGIIPATRNEQTQA
CCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHH
RAAAAQSTLQEANGALARLRPVSGGQAGEYELLAPLSGRVMRRHLSLGQAVAPLDIAFIV
HHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCEEEEEEE
AQPGPLDVSVAVPLRWRSDLHPGLEVRLPDGTIARVTAVGGDTDLSSQSLRVRARVDADQ
ECCCCCEEEEEEEEEECCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCEEEEEEECCCC
AGADRYAAGQQISVALLLPAPQGTLSVPSSALLPAGSAHVVYVAEPSSQDKHGDLRVRAV
CCCCHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEE
PVRLLGQDESDASSAVRAVSPDTAPLAAGMQVVVRGTALLKSMIPLQ
EEEEECCCCCCHHHHEEECCCCCCHHHHCHHEEEHHHHHHHHHCCCC
>Mature Secondary Structure 
SFPTLKAAGTSSRTKTLALSAVGVAVLAAVGYGWWAWATQQTTVADKDASEAVAQPNAG
CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCEEEEECCCCEECCCCCHHHHCCCCCC
GVHLNATQLRAQGVETALVKDAAVIPLDSLPAQTVAPLSASAQVVAPYGGVVTRVLVDEG
CEEEEHHHHHHCCCHHHHHCCCEEECCCCCCCHHCCCCCCCCEEEECCCCEEEEEEECCC
AAVRQGQALARIQSKDVLASQADLARARTEAAVATAQARRDATLLAEGIIPATRNEQTQA
CCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHH
RAAAAQSTLQEANGALARLRPVSGGQAGEYELLAPLSGRVMRRHLSLGQAVAPLDIAFIV
HHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCEEEEEEE
AQPGPLDVSVAVPLRWRSDLHPGLEVRLPDGTIARVTAVGGDTDLSSQSLRVRARVDADQ
ECCCCCEEEEEEEEEECCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCEEEEEEECCCC
AGADRYAAGQQISVALLLPAPQGTLSVPSSALLPAGSAHVVYVAEPSSQDKHGDLRVRAV
CCCCHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEE
PVRLLGQDESDASSAVRAVSPDTAPLAAGMQVVVRGTALLKSMIPLQ
EEEEECCCCCCHHHHEEECCCCCCHHHHCHHEEEHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA