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The map label for this gene is tniQ

Identifier: 94311940

GI number: 94311940

Start: 3263789

End: 3265006

Strand: Reverse

Name: tniQ

Synonym: Rmet_3008

Alternate gene names: NA

Gene position: 3265006-3263789 (Counterclockwise)

Preceding gene: 94311941

Following gene: 94311939

Centisome position: 83.12

GC content: 61.66

Gene sequence:

>1218_bases
GTGAAGCCAGCGCCACGCTGGCCACTGCATCCGGCCCCCAGAGAAGGCGAAGCCTTGTCTTCGTGGCTCAACCGCGTGGC
CCTTTGCTATCACATGGAGGTGTCCGAGCTGCTGGAGCACGATCTTGGTCACGCTCAGGTTGATGACCTGGATACCGCGC
CACCACTGGCGCTGTTGGCGATGCTCTCCCAGCGGAGCGGCATCGAGCCGGACCGGCTGCGTTGCATGAGTTTCGCCGGC
TGGGTGCCTTGGCTACTGGACAGCCTTGATGATCAGATTCCAGACGCATTGGAAACCTATGCGTTCCAGCTCTCGGTGCT
GCTGCCGAAACTCCGCCGTAGGACGCGATCCATCACGAGCTGGCGTGCCTGGCTGCCCAGCCAGCCGATACATCGCGCCT
GTCCTCTCTGTCTGAACGACCCGGCAAACCAAGCCGTACTGCTTGCATGGAAGCTGCCCCTGATGCTGAGCTGCCCGCTG
CATGGCTGCTGGCTGGAATCCTATTGGGGCGTGCCTGGGCGGTTTCTCGGCTGGGAGAACGCCGACACTGCGTCGCGCAC
CGCCAGCGACGCGATTGCAGTGATGGACCGGCGTACCTGGCAGGCACTGACGACCGGCCATGTGGAACTGCCGTGCCGAC
GCATCCACGCTGGATTGTGGTTTCGACTGCTACGCACGCTGCTCGATGAGCTGAACACCCCGCTTTCGGCGTGCGGAACC
TACGCGGGGTATCTCCGCCAAGTCTGGCAAGGCTGCGGGCATCCGCTGCGTGCTGGGCAAAGTCTGTGGCGACCGTATGA
AACCCTGAACCCGGCAATACGGTTGCAGATGCTGGAGGCGGCGGCAACGGCAATCAGCTTGATCGAGGTGAGGGATATCA
GCCCGCCAGGCGAGCATGCAAAGCTGTTCTGGTCCGAGCTCCAAACCGGGTTCACCAGTGGTCTGCCGGCGAAACCGCCG
AAGCCCGAACCCGTCAATCATTGGCAACGGGCGGTCCAAGCTATCAGTGAGGCGATCATTGAAGCCCGGCACGACCCCGA
GACGGCACGCTCGCTGTTCGCGTTGGCTTCCTATGGTCGGCGCGATCCCGCTTCCCTGGAACAGTTGCGCGCCACCTTTG
CAAAGGAAGGCATTCCCCCGGAATTTCTGTCACATTACGAGGCTGATGGACCCTTTGCATGTCTTAGACAGAATGACGGG
TTAAGTGACAAATTTTGA

Upstream 100 bases:

>100_bases
CCGTGGAGAGCGGCGAGGAAGCGATCAACCATCGCACGCTGAGCATGGCCGATTACACCGGTCCCAGCGAGCGGCGGCGG
CAATTCGAGCGGGAACTGAT

Downstream 100 bases:

>100_bases
CGACCAGAACTTTCCGGTGCACACTGTCACATAATCGAACGTATATGTGACAGGTGCAAGATGCTGATTGGCTACATGCG
GGTATCGAAAGCAGACGGCT

Product: transposon-like protein TniQ (Tn6048)

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MKPAPRWPLHPAPREGEALSSWLNRVALCYHMEVSELLEHDLGHAQVDDLDTAPPLALLAMLSQRSGIEPDRLRCMSFAG
WVPWLLDSLDDQIPDALETYAFQLSVLLPKLRRRTRSITSWRAWLPSQPIHRACPLCLNDPANQAVLLAWKLPLMLSCPL
HGCWLESYWGVPGRFLGWENADTASRTASDAIAVMDRRTWQALTTGHVELPCRRIHAGLWFRLLRTLLDELNTPLSACGT
YAGYLRQVWQGCGHPLRAGQSLWRPYETLNPAIRLQMLEAAATAISLIEVRDISPPGEHAKLFWSELQTGFTSGLPAKPP
KPEPVNHWQRAVQAISEAIIEARHDPETARSLFALASYGRRDPASLEQLRATFAKEGIPPEFLSHYEADGPFACLRQNDG
LSDKF

Sequences:

>Translated_405_residues
MKPAPRWPLHPAPREGEALSSWLNRVALCYHMEVSELLEHDLGHAQVDDLDTAPPLALLAMLSQRSGIEPDRLRCMSFAG
WVPWLLDSLDDQIPDALETYAFQLSVLLPKLRRRTRSITSWRAWLPSQPIHRACPLCLNDPANQAVLLAWKLPLMLSCPL
HGCWLESYWGVPGRFLGWENADTASRTASDAIAVMDRRTWQALTTGHVELPCRRIHAGLWFRLLRTLLDELNTPLSACGT
YAGYLRQVWQGCGHPLRAGQSLWRPYETLNPAIRLQMLEAAATAISLIEVRDISPPGEHAKLFWSELQTGFTSGLPAKPP
KPEPVNHWQRAVQAISEAIIEARHDPETARSLFALASYGRRDPASLEQLRATFAKEGIPPEFLSHYEADGPFACLRQNDG
LSDKF
>Mature_405_residues
MKPAPRWPLHPAPREGEALSSWLNRVALCYHMEVSELLEHDLGHAQVDDLDTAPPLALLAMLSQRSGIEPDRLRCMSFAG
WVPWLLDSLDDQIPDALETYAFQLSVLLPKLRRRTRSITSWRAWLPSQPIHRACPLCLNDPANQAVLLAWKLPLMLSCPL
HGCWLESYWGVPGRFLGWENADTASRTASDAIAVMDRRTWQALTTGHVELPCRRIHAGLWFRLLRTLLDELNTPLSACGT
YAGYLRQVWQGCGHPLRAGQSLWRPYETLNPAIRLQMLEAAATAISLIEVRDISPPGEHAKLFWSELQTGFTSGLPAKPP
KPEPVNHWQRAVQAISEAIIEARHDPETARSLFALASYGRRDPASLEQLRATFAKEGIPPEFLSHYEADGPFACLRQNDG
LSDKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45502; Mature: 45502

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPAPRWPLHPAPREGEALSSWLNRVALCYHMEVSELLEHDLGHAQVDDLDTAPPLALLA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
MLSQRSGIEPDRLRCMSFAGWVPWLLDSLDDQIPDALETYAFQLSVLLPKLRRRTRSITS
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
WRAWLPSQPIHRACPLCLNDPANQAVLLAWKLPLMLSCPLHGCWLESYWGVPGRFLGWEN
HHHHCCCCCHHHHCCCCCCCCCCCEEEEEEECCHHHCCCCCHHHHHHHCCCCCCCCCCCC
ADTASRTASDAIAVMDRRTWQALTTGHVELPCRRIHAGLWFRLLRTLLDELNTPLSACGT
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
YAGYLRQVWQGCGHPLRAGQSLWRPYETLNPAIRLQMLEAAATAISLIEVRDISPPGEHA
HHHHHHHHHHHCCCHHHCCHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
KLFWSELQTGFTSGLPAKPPKPEPVNHWQRAVQAISEAIIEARHDPETARSLFALASYGR
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
RDPASLEQLRATFAKEGIPPEFLSHYEADGPFACLRQNDGLSDKF
CCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MKPAPRWPLHPAPREGEALSSWLNRVALCYHMEVSELLEHDLGHAQVDDLDTAPPLALLA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
MLSQRSGIEPDRLRCMSFAGWVPWLLDSLDDQIPDALETYAFQLSVLLPKLRRRTRSITS
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
WRAWLPSQPIHRACPLCLNDPANQAVLLAWKLPLMLSCPLHGCWLESYWGVPGRFLGWEN
HHHHCCCCCHHHHCCCCCCCCCCCEEEEEEECCHHHCCCCCHHHHHHHCCCCCCCCCCCC
ADTASRTASDAIAVMDRRTWQALTTGHVELPCRRIHAGLWFRLLRTLLDELNTPLSACGT
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
YAGYLRQVWQGCGHPLRAGQSLWRPYETLNPAIRLQMLEAAATAISLIEVRDISPPGEHA
HHHHHHHHHHHCCCHHHCCHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
KLFWSELQTGFTSGLPAKPPKPEPVNHWQRAVQAISEAIIEARHDPETARSLFALASYGR
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
RDPASLEQLRATFAKEGIPPEFLSHYEADGPFACLRQNDGLSDKF
CCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA