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The map label for this gene is omlA [H]

Identifier: 94311907

GI number: 94311907

Start: 3234428

End: 3235204

Strand: Reverse

Name: omlA [H]

Synonym: Rmet_2975

Alternate gene names: 94311907

Gene position: 3235204-3234428 (Counterclockwise)

Preceding gene: 94311909

Following gene: 94311906

Centisome position: 82.36

GC content: 66.02

Gene sequence:

>777_bases
ATGACGCGTACACGCCGCTCTCCGCGGAGTGACCAGAATGCGCCTGGCCGTGCCGGATGCCTCCGCAGTCTTTGGGGTGT
GCCGGTGCCGGTATCTACCCATTCCCGTCTGGAAGCGAGATACATGCGTTCATTCCGTTCGTCCGCCATGCGCCCCGCGC
TGGTGTCTTCCCTGCTGGCGGCGGCACTGCTGGCCGGTGCCTGTTCCGCCTACGACAGCACCTCGCGCAAGGTGGCCGAT
GCCATCACGCCGTATCGGATCAACATCGTCCAGGGCAACTTCGTGTCGCGCGAGGCCGTGTCGCAATTGCGCGAAGGCAT
GACGCGCGATCAGGTGCGCTTCCTGCTCGGCACCCCGCTGCTGACGGACGTCTTTCACGCGGATCGATGGGACTATTACT
TCTCTTTCCGTCGCGGCAGCCGGCCGGTCGTGCAATCGCGCCAGTTCACCGTGTACTTCGAGGGTGACAAGCTTGTGCGG
TGGGTGGGCAACGAGTTGCCGTCCGAATACGAGCTTATCGCCGAAATTGACGGCATGAAGGCGGCGCAGAAGAATCAGAC
GCCAGGCAAGATTGTCTTTGGCGGCGAGCCAGCGCCAGCATCCGCGCCGGCGGCAATGCCGGCATCGGCGCCGGCTGCCA
TGCCCGTCGCGGCAGCGAGCGAACCGGCAGCCGCGCCGGCAGCCGTGGCACCTGCTGCCGCCGAGGCAGCTCAGCAAAAG
CCGGCCGAGGCGCCAGCCAGCGCGGCTTCGGACGTTCCGGCCAAACCTGCCAGCTAA

Upstream 100 bases:

>100_bases
TTTGAGGTCCGCCGGACTCGGCATGGGCGTGACTCCCTAGAGTACAATGTCTGGATAGTTGAATCATAAGGGTTTTGGCG
GCAAATGTCGCCCCGGTGCC

Downstream 100 bases:

>100_bases
ACGCGGCGGCGAGTCCATTTCAGACACCCAAGCCGTCCGGTCGAATGCCGGACGGTTTTCATTCCGACATACCCAATCAT
GAAAATCGCCATTGCAGGGG

Product: Lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MTRTRRSPRSDQNAPGRAGCLRSLWGVPVPVSTHSRLEARYMRSFRSSAMRPALVSSLLAAALLAGACSAYDSTSRKVAD
AITPYRINIVQGNFVSREAVSQLREGMTRDQVRFLLGTPLLTDVFHADRWDYYFSFRRGSRPVVQSRQFTVYFEGDKLVR
WVGNELPSEYELIAEIDGMKAAQKNQTPGKIVFGGEPAPASAPAAMPASAPAAMPVAAASEPAAAPAAVAPAAAEAAQQK
PAEAPASAASDVPAKPAS

Sequences:

>Translated_258_residues
MTRTRRSPRSDQNAPGRAGCLRSLWGVPVPVSTHSRLEARYMRSFRSSAMRPALVSSLLAAALLAGACSAYDSTSRKVAD
AITPYRINIVQGNFVSREAVSQLREGMTRDQVRFLLGTPLLTDVFHADRWDYYFSFRRGSRPVVQSRQFTVYFEGDKLVR
WVGNELPSEYELIAEIDGMKAAQKNQTPGKIVFGGEPAPASAPAAMPASAPAAMPVAAASEPAAAPAAVAPAAAEAAQQK
PAEAPASAASDVPAKPAS
>Mature_257_residues
TRTRRSPRSDQNAPGRAGCLRSLWGVPVPVSTHSRLEARYMRSFRSSAMRPALVSSLLAAALLAGACSAYDSTSRKVADA
ITPYRINIVQGNFVSREAVSQLREGMTRDQVRFLLGTPLLTDVFHADRWDYYFSFRRGSRPVVQSRQFTVYFEGDKLVRW
VGNELPSEYELIAEIDGMKAAQKNQTPGKIVFGGEPAPASAPAAMPASAPAAMPVAAASEPAAAPAAVAPAAAEAAQQKP
AEAPASAASDVPAKPAS

Specific function: May have a structural role in maintaining the cell envelope integrity [H]

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smpA/omlA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007450 [H]

Pfam domain/function: PF04355 SmpA_OmlA [H]

EC number: NA

Molecular weight: Translated: 27489; Mature: 27358

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTRRSPRSDQNAPGRAGCLRSLWGVPVPVSTHSRLEARYMRSFRSSAMRPALVSSLLA
CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
AALLAGACSAYDSTSRKVADAITPYRINIVQGNFVSREAVSQLREGMTRDQVRFLLGTPL
HHHHHHHHHHHCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHCCHH
LTDVFHADRWDYYFSFRRGSRPVVQSRQFTVYFEGDKLVRWVGNELPSEYELIAEIDGMK
HHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHCCHH
AAQKNQTPGKIVFGGEPAPASAPAAMPASAPAAMPVAAASEPAAAPAAVAPAAAEAAQQK
HHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
PAEAPASAASDVPAKPAS
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRTRRSPRSDQNAPGRAGCLRSLWGVPVPVSTHSRLEARYMRSFRSSAMRPALVSSLLA
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
AALLAGACSAYDSTSRKVADAITPYRINIVQGNFVSREAVSQLREGMTRDQVRFLLGTPL
HHHHHHHHHHHCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHCCHH
LTDVFHADRWDYYFSFRRGSRPVVQSRQFTVYFEGDKLVRWVGNELPSEYELIAEIDGMK
HHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHCCHH
AAQKNQTPGKIVFGGEPAPASAPAAMPASAPAAMPVAAASEPAAAPAAVAPAAAEAAQQK
HHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
PAEAPASAASDVPAKPAS
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9973334 [H]