| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is phcB
Identifier: 94311884
GI number: 94311884
Start: 3210187
End: 3211656
Strand: Reverse
Name: phcB
Synonym: Rmet_2952
Alternate gene names: NA
Gene position: 3211656-3210187 (Counterclockwise)
Preceding gene: 94311885
Following gene: 94311883
Centisome position: 81.76
GC content: 62.72
Gene sequence:
>1470_bases TTGCCTGAGCTGTACCCGGCCGGTGCCCATTGGCGCCACGGTGCGCAGCGTTTTTCGGATTTCCCCTGGCGCGATACCGT GTACTCCAAAACCCAAATCGATCCGGTAGTTAGCTTCCGCAACTCGCAGGGCGAGCAGGTGCGAGGCACGATCATCAATC TCCAGCGCAAGTCGCTGGTGATGGAAATCTACAATCCTTATTCCATCGTTCAGGTCAGCGAGGTATTGAGCGAACTGAGC GTGCGCATGGGCGCGAAAAATGCGTACCTGGGCAAGGCCGTGGTCATGAGTCTGGTGAATACCGGCCTGACCGCGGTGGT GTCCCTGACGCTGATCGACGAGTGGCGCGAGCTCACCGACGTCAACGATGCGCCCAAATCGGTGGCGCGCGAGGCCGAGC TGTTCGTGCAGGATTGGGACACACGTTTCAATATCCGGCGCGACTACCAGATCGTGGTCAACGAGATGCGCGCGTATCTC TCGGAAGTCTCCCGATGGGTCGAGCAGGTGGACCTGACCGAGTCGCTGCCGAAGCGGGAAGGACGCCTGCGCGAGGACGT GTTCTACGAACTGGCCACGCCGCTGATGGGCAAGGTGAAGGTCTATCTGGACTGGCTCGAGGACGAGGCGCAACGCGTCG ATCCCGAACTGGCGCCGGTCCACCGCACCTATGCGCAGGCCGCGCTGCACCCGCTGCTGCTGCGCGCGCCGTTCGTCTAT CGTACGTTCACCAAGCCGCTCGGTTATGCCGGCGACTATGAAATGGTGAACCAGATCCTCAGTGATCCGCAGCAGGGGCC CACCACTTACTTCCAGATCGTCAACACGGCGTTCCTGAAGGCGGCCGTGGCCACCGCGCACCGCAACCGAATCGACCTGC TGGTCGATTTCCTGACGCGCCAGGCCGAACGCGCACGTGCCGAGGGCCGCCCGTTCCGCGTGCTCAACGTCGGCTGCGGC CCCGCGTTCGAGATCCAGCGCTTCGTACGGGAGTATGCGAATCCGGAGCTGCTGTCGTTCCAGCTCGTGGACTTCAGCGC GGAGACGCTCGAGTACACGCGGGGTTCGATCGAACGGTCCGCCGCGTCGGCCGGGCACAAGGTATCGGTCGAGATGGTGC ACCAGTCCGTGCACGACCTGCTCAAGCGTCGCATCACCGCGGACGACCCGAGCGTGCGCGAATTCGACGCCGTGTATTGC GCCGGTCTGTTCGACTATCTCTCCGACAAGGTCTGCTCGCGCCTGCTGTCGTACTTCGCCTCGCGCACGAGGCCGGGCGG TCATCTGCTCGTTACCAACGTCCACTCCGACAACCCCGAGAAGTTCGGGATGGAGCATCTGCTGGAGTGGTACCTGATCT ATCGCGACGAGGCCGGTATGGCCTCGCTGTTGCCGGAGAACTCGCATGCCCACCGACTCTATGTCGATGAAACCGGCGTC AATGTCTTCGCCGAAGCCGCTATCCGTTGA
Upstream 100 bases:
>100_bases CATCGGCCTGCGCCGATCGAGCCCGTCCCCGCAACAGGTCACGCGCATCGCTATGAGCATTGGCTGCATTCCCTGAGTTG GTTGTCCGCCGCAAGGCCCC
Downstream 100 bases:
>100_bases GGATTCGGCCGCCCAACCGGCGAAGGCGATGAGTTCGAACAAGCTATACGCCGGATACCAGTCCGAACTGGCCGATTTCC GCCTGGCATTCAGCCGGGGC
Product: extracellular factor (EF) 3-hydroxypalmitic acid methyl ester biosynthesis protein
Products: NA
Alternate protein names: Methyltransferase Type; SAM-Dependent Methyltransferase; MCP Methyltransferase CheR-Type; Regulatory Protein Sam-Dependent Methyltransferase Domain; Methyltransferase; SAM-Dependent Methyltransferases; Methyltransferase Protein; Two Component Protein; Methyltransferase Domain Family; Regulatory Protein SAM-Dependent Methyltransferase Domain
Number of amino acids: Translated: 489; Mature: 488
Protein sequence:
>489_residues MPELYPAGAHWRHGAQRFSDFPWRDTVYSKTQIDPVVSFRNSQGEQVRGTIINLQRKSLVMEIYNPYSIVQVSEVLSELS VRMGAKNAYLGKAVVMSLVNTGLTAVVSLTLIDEWRELTDVNDAPKSVAREAELFVQDWDTRFNIRRDYQIVVNEMRAYL SEVSRWVEQVDLTESLPKREGRLREDVFYELATPLMGKVKVYLDWLEDEAQRVDPELAPVHRTYAQAALHPLLLRAPFVY RTFTKPLGYAGDYEMVNQILSDPQQGPTTYFQIVNTAFLKAAVATAHRNRIDLLVDFLTRQAERARAEGRPFRVLNVGCG PAFEIQRFVREYANPELLSFQLVDFSAETLEYTRGSIERSAASAGHKVSVEMVHQSVHDLLKRRITADDPSVREFDAVYC AGLFDYLSDKVCSRLLSYFASRTRPGGHLLVTNVHSDNPEKFGMEHLLEWYLIYRDEAGMASLLPENSHAHRLYVDETGV NVFAEAAIR
Sequences:
>Translated_489_residues MPELYPAGAHWRHGAQRFSDFPWRDTVYSKTQIDPVVSFRNSQGEQVRGTIINLQRKSLVMEIYNPYSIVQVSEVLSELS VRMGAKNAYLGKAVVMSLVNTGLTAVVSLTLIDEWRELTDVNDAPKSVAREAELFVQDWDTRFNIRRDYQIVVNEMRAYL SEVSRWVEQVDLTESLPKREGRLREDVFYELATPLMGKVKVYLDWLEDEAQRVDPELAPVHRTYAQAALHPLLLRAPFVY RTFTKPLGYAGDYEMVNQILSDPQQGPTTYFQIVNTAFLKAAVATAHRNRIDLLVDFLTRQAERARAEGRPFRVLNVGCG PAFEIQRFVREYANPELLSFQLVDFSAETLEYTRGSIERSAASAGHKVSVEMVHQSVHDLLKRRITADDPSVREFDAVYC AGLFDYLSDKVCSRLLSYFASRTRPGGHLLVTNVHSDNPEKFGMEHLLEWYLIYRDEAGMASLLPENSHAHRLYVDETGV NVFAEAAIR >Mature_488_residues PELYPAGAHWRHGAQRFSDFPWRDTVYSKTQIDPVVSFRNSQGEQVRGTIINLQRKSLVMEIYNPYSIVQVSEVLSELSV RMGAKNAYLGKAVVMSLVNTGLTAVVSLTLIDEWRELTDVNDAPKSVAREAELFVQDWDTRFNIRRDYQIVVNEMRAYLS EVSRWVEQVDLTESLPKREGRLREDVFYELATPLMGKVKVYLDWLEDEAQRVDPELAPVHRTYAQAALHPLLLRAPFVYR TFTKPLGYAGDYEMVNQILSDPQQGPTTYFQIVNTAFLKAAVATAHRNRIDLLVDFLTRQAERARAEGRPFRVLNVGCGP AFEIQRFVREYANPELLSFQLVDFSAETLEYTRGSIERSAASAGHKVSVEMVHQSVHDLLKRRITADDPSVREFDAVYCA GLFDYLSDKVCSRLLSYFASRTRPGGHLLVTNVHSDNPEKFGMEHLLEWYLIYRDEAGMASLLPENSHAHRLYVDETGVN VFAEAAIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55837; Mature: 55706
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPELYPAGAHWRHGAQRFSDFPWRDTVYSKTQIDPVVSFRNSQGEQVRGTIINLQRKSLV CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHH MEIYNPYSIVQVSEVLSELSVRMGAKNAYLGKAVVMSLVNTGLTAVVSLTLIDEWRELTD HHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC VNDAPKSVAREAELFVQDWDTRFNIRRDYQIVVNEMRAYLSEVSRWVEQVDLTESLPKRE CCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHC GRLREDVFYELATPLMGKVKVYLDWLEDEAQRVDPELAPVHRTYAQAALHPLLLRAPFVY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHH RTFTKPLGYAGDYEMVNQILSDPQQGPTTYFQIVNTAFLKAAVATAHRNRIDLLVDFLTR HHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH QAERARAEGRPFRVLNVGCGPAFEIQRFVREYANPELLSFQLVDFSAETLEYTRGSIERS HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHH AASAGHKVSVEMVHQSVHDLLKRRITADDPSVREFDAVYCAGLFDYLSDKVCSRLLSYFA HHCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRTRPGGHLLVTNVHSDNPEKFGMEHLLEWYLIYRDEAGMASLLPENSHAHRLYVDETGV HCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHEECCCCHHHHCCCCCCCCEEEEECCCC NVFAEAAIR HHHHHHHCC >Mature Secondary Structure PELYPAGAHWRHGAQRFSDFPWRDTVYSKTQIDPVVSFRNSQGEQVRGTIINLQRKSLV CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHH MEIYNPYSIVQVSEVLSELSVRMGAKNAYLGKAVVMSLVNTGLTAVVSLTLIDEWRELTD HHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC VNDAPKSVAREAELFVQDWDTRFNIRRDYQIVVNEMRAYLSEVSRWVEQVDLTESLPKRE CCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHC GRLREDVFYELATPLMGKVKVYLDWLEDEAQRVDPELAPVHRTYAQAALHPLLLRAPFVY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHH RTFTKPLGYAGDYEMVNQILSDPQQGPTTYFQIVNTAFLKAAVATAHRNRIDLLVDFLTR HHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH QAERARAEGRPFRVLNVGCGPAFEIQRFVREYANPELLSFQLVDFSAETLEYTRGSIERS HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHH AASAGHKVSVEMVHQSVHDLLKRRITADDPSVREFDAVYCAGLFDYLSDKVCSRLLSYFA HHCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRTRPGGHLLVTNVHSDNPEKFGMEHLLEWYLIYRDEAGMASLLPENSHAHRLYVDETGV HCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHEECCCCHHHHCCCCCCCCEEEEECCCC NVFAEAAIR HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA