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The map label for this gene is secF [H]

Identifier: 94311879

GI number: 94311879

Start: 3203941

End: 3204915

Strand: Direct

Name: secF [H]

Synonym: Rmet_2947

Alternate gene names: 94311879

Gene position: 3203941-3204915 (Clockwise)

Preceding gene: 335055638

Following gene: 94311880

Centisome position: 81.56

GC content: 61.74

Gene sequence:

>975_bases
ATGGAATTTTTCCGCATCAAGCGCGACATTCCGTTCATGAAGCACGCGTTGATCTTCAACGTGGTGTCCTTCCTGACGTT
TGCCGCCGCTGTTTTCTTCCTCTGGCACAAGGGCCTGCACCTGTCGATCGAATTCACCGGCGGCACGGTGATGGAGGTCA
ACTACCAGCAGGCCGTCGATCTCGAGAAGGTCCGTGGCCAGGTCAGCAAGCTCGGCTACTCCGATGTGCAGGTGCAGAAT
TTCGGCACCTCGCGCGACGTGATGATCCGCCTGCCGCTGCAGAAGGGCCCGGACGGCAAGCAGGTGACCTCCGCGCAGCA
GAGCGAGCAGGTCATGGGCGCGCTGACGGCGGCCTCGCCTGACGTCAAGCTGCAACGCGTGGAGTTCGTCGGCCCGCAGG
TGGGCAAGGAACTGGCCACGGACGGCCTGCTGGCCCTGCTGTGCGTGGTGGCCGGTATCGTGATCTACCTGTCGTTCCGC
TTCGAATGGAAGTTCGCGGTCGCCGGTATCATCGCCAACCTGCACGATGTGGTGATCATCCTGGGCTTCTTCGCCTTCTT
CCAGTGGGAGTTCTCGCTCTCGGTGCTGGCGGCGATCCTGGCGGTGCTCGGCTACTCCGTGAACGAGTCGGTGGTGATTT
TCGACCGGATCCGCGAAGCCTTCCGCAAGTACCGCAAGATGACTACGCATGAAGTCATCGACCACGCGATCACCAGCACG
ATGTCGCGGACCATCATCACCCACGGCTCGACCGAAATGATGGTGCTGTCGATGTTCTTCTTCGGCGGCCCGACGCTGCA
CTACTTCGCCCTGGCCCTGACTGTGGGTATTCTGTTCGGTATCTACTCGTCGGTGTTCGTGGCCGCGGCGCTGGCGATGT
GGCTCGGCGTGAAGCGCGAAGACCTCGTCAAGGGCGACAAGAAAGGCGGCGACGTAACCGACCGCAACGACCCGAACTTC
GGCGCGCAAGCTTGA

Upstream 100 bases:

>100_bases
CAAGAAGAAGCTCCAGGGCTTGGCCATCGGTCAGATCTGGAAGCCGGACACCACCGACACCCCGGTCGCCAAGTAAGCCA
GGACACATCAGGAACCCATC

Downstream 100 bases:

>100_bases
CGCGGCGCTCGGGTTGAACGAAAAAGGCACCTTCGGGTGCCTTTTTCGTTTGGCGAGGAGTCCGGGACTGCCATACCCGT
CAGCACCCGTGGCAAAAAGC

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MEFFRIKRDIPFMKHALIFNVVSFLTFAAAVFFLWHKGLHLSIEFTGGTVMEVNYQQAVDLEKVRGQVSKLGYSDVQVQN
FGTSRDVMIRLPLQKGPDGKQVTSAQQSEQVMGALTAASPDVKLQRVEFVGPQVGKELATDGLLALLCVVAGIVIYLSFR
FEWKFAVAGIIANLHDVVIILGFFAFFQWEFSLSVLAAILAVLGYSVNESVVIFDRIREAFRKYRKMTTHEVIDHAITST
MSRTIITHGSTEMMVLSMFFFGGPTLHYFALALTVGILFGIYSSVFVAAALAMWLGVKREDLVKGDKKGGDVTDRNDPNF
GAQA

Sequences:

>Translated_324_residues
MEFFRIKRDIPFMKHALIFNVVSFLTFAAAVFFLWHKGLHLSIEFTGGTVMEVNYQQAVDLEKVRGQVSKLGYSDVQVQN
FGTSRDVMIRLPLQKGPDGKQVTSAQQSEQVMGALTAASPDVKLQRVEFVGPQVGKELATDGLLALLCVVAGIVIYLSFR
FEWKFAVAGIIANLHDVVIILGFFAFFQWEFSLSVLAAILAVLGYSVNESVVIFDRIREAFRKYRKMTTHEVIDHAITST
MSRTIITHGSTEMMVLSMFFFGGPTLHYFALALTVGILFGIYSSVFVAAALAMWLGVKREDLVKGDKKGGDVTDRNDPNF
GAQA
>Mature_324_residues
MEFFRIKRDIPFMKHALIFNVVSFLTFAAAVFFLWHKGLHLSIEFTGGTVMEVNYQQAVDLEKVRGQVSKLGYSDVQVQN
FGTSRDVMIRLPLQKGPDGKQVTSAQQSEQVMGALTAASPDVKLQRVEFVGPQVGKELATDGLLALLCVVAGIVIYLSFR
FEWKFAVAGIIANLHDVVIILGFFAFFQWEFSLSVLAAILAVLGYSVNESVVIFDRIREAFRKYRKMTTHEVIDHAITST
MSRTIITHGSTEMMVLSMFFFGGPTLHYFALALTVGILFGIYSSVFVAAALAMWLGVKREDLVKGDKKGGDVTDRNDPNF
GAQA

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=292, Percent_Identity=39.3835616438356, Blast_Score=245, Evalue=3e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 35971; Mature: 35971

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFFRIKRDIPFMKHALIFNVVSFLTFAAAVFFLWHKGLHLSIEFTGGTVMEVNYQQAVD
CCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECHHHHHH
LEKVRGQVSKLGYSDVQVQNFGTSRDVMIRLPLQKGPDGKQVTSAQQSEQVMGALTAASP
HHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC
DVKLQRVEFVGPQVGKELATDGLLALLCVVAGIVIYLSFRFEWKFAVAGIIANLHDVVII
CCEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHH
LGFFAFFQWEFSLSVLAAILAVLGYSVNESVVIFDRIREAFRKYRKMTTHEVIDHAITST
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSRTIITHGSTEMMVLSMFFFGGPTLHYFALALTVGILFGIYSSVFVAAALAMWLGVKRE
HHHHHEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
DLVKGDKKGGDVTDRNDPNFGAQA
HHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEFFRIKRDIPFMKHALIFNVVSFLTFAAAVFFLWHKGLHLSIEFTGGTVMEVNYQQAVD
CCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECHHHHHH
LEKVRGQVSKLGYSDVQVQNFGTSRDVMIRLPLQKGPDGKQVTSAQQSEQVMGALTAASP
HHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC
DVKLQRVEFVGPQVGKELATDGLLALLCVVAGIVIYLSFRFEWKFAVAGIIANLHDVVII
CCEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHH
LGFFAFFQWEFSLSVLAAILAVLGYSVNESVVIFDRIREAFRKYRKMTTHEVIDHAITST
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSRTIITHGSTEMMVLSMFFFGGPTLHYFALALTVGILFGIYSSVFVAAALAMWLGVKRE
HHHHHEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
DLVKGDKKGGDVTDRNDPNFGAQA
HHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]