| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is dgk [H]
Identifier: 94311848
GI number: 94311848
Start: 3170266
End: 3170907
Strand: Direct
Name: dgk [H]
Synonym: Rmet_2916
Alternate gene names: 94311848
Gene position: 3170266-3170907 (Clockwise)
Preceding gene: 94311847
Following gene: 94311849
Centisome position: 80.71
GC content: 64.49
Gene sequence:
>642_bases ATGCTCGATCATCTGCGTCGTATTGTCATCGAAGGCCCGGTCGGCTCCGGCAAGGCCGCGCTGGCCCAACGCCTGGCGCG CCATCTCCAGGCGGCCGAACTCCCCGATGGCGCGCGCAACAACCCCTTCCTCGAACGCTTCTACCGCGAACCACAGCGCT ATGCGCTGGCGATGCAGCTCGCCTGCCTGAACCAGCGCGTGACCCAGCTCCAGCAGTGGCATTCGGCGATGCTGGCCGGC CAGCGCATGATCGGCAACTTCCTGTTTGCGCGCGACCGTGTCTACGCTTCGCTGACACTCGAAGCTGACGAACTCGCGCT CTACGACGCGCTGGCGGCACGCCTGCAAGCGCCAGCGCAGCGCGTGGATCTGGTCATCATGCTGCAGGCCACGCCCTCGC TGCTGCGTGAGCGAATCGCGCGGCGCGGCCTGCCCGGCGAGAGCGGTATCGACGAGCAATATCTGCAGCGGCTCACCGAT GCCTATGGCGAGTTGTTCCACCGCTACGACGAAGCCCCGGTGCTGATCGTCGATACCGCACATTTCAACCCGGTAGACAA CGACGTCGATTTCCGTACACTACTGTCGCGCATCGAGAACATGCGAGGCCGCAGGGCCTTTCTGAATCTCGTAGCGTCCT GA
Upstream 100 bases:
>100_bases TGCAAGAACAGCGCATCGAGAAGTTTTCCTCATGCAAATGCTCGCGCATGAAGGAAGGCGACGGCGCGCGGCCATGAGCG CGCCACGCCGCGGCTGACAC
Downstream 100 bases:
>100_bases GTCGTCCCGACGCGTCTGTCGAGCCGTTTCCACACGTGAAGCGGCTTTCGCCAGGCAGCACAACACACGAAAAAGACAGC GGTCGACCCTGGCCATCCGA
Product: deoxynucleoside kinase
Products: NA
Alternate protein names: DGUO kinase; dGK [H]
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MLDHLRRIVIEGPVGSGKAALAQRLARHLQAAELPDGARNNPFLERFYREPQRYALAMQLACLNQRVTQLQQWHSAMLAG QRMIGNFLFARDRVYASLTLEADELALYDALAARLQAPAQRVDLVIMLQATPSLLRERIARRGLPGESGIDEQYLQRLTD AYGELFHRYDEAPVLIVDTAHFNPVDNDVDFRTLLSRIENMRGRRAFLNLVAS
Sequences:
>Translated_213_residues MLDHLRRIVIEGPVGSGKAALAQRLARHLQAAELPDGARNNPFLERFYREPQRYALAMQLACLNQRVTQLQQWHSAMLAG QRMIGNFLFARDRVYASLTLEADELALYDALAARLQAPAQRVDLVIMLQATPSLLRERIARRGLPGESGIDEQYLQRLTD AYGELFHRYDEAPVLIVDTAHFNPVDNDVDFRTLLSRIENMRGRRAFLNLVAS >Mature_213_residues MLDHLRRIVIEGPVGSGKAALAQRLARHLQAAELPDGARNNPFLERFYREPQRYALAMQLACLNQRVTQLQQWHSAMLAG QRMIGNFLFARDRVYASLTLEADELALYDALAARLQAPAQRVDLVIMLQATPSLLRERIARRGLPGESGIDEQYLQRLTD AYGELFHRYDEAPVLIVDTAHFNPVDNDVDFRTLLSRIENMRGRRAFLNLVAS
Specific function: Plays an essential role in generating the deoxyribonucleotide precursors dGTP for DNA metabolism. Highly specific toward deoxyguanosine (dGuo) and deoxyinosine (dIno). Only marginal activity is observed with guanosine. UTP is slightly more efficient as ph
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCK/DGK family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: =2.7.1.113 [H]
Molecular weight: Translated: 24210; Mature: 24210
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDHLRRIVIEGPVGSGKAALAQRLARHLQAAELPDGARNNPFLERFYREPQRYALAMQL CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH ACLNQRVTQLQQWHSAMLAGQRMIGNFLFARDRVYASLTLEADELALYDALAARLQAPAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHCCHH RVDLVIMLQATPSLLRERIARRGLPGESGIDEQYLQRLTDAYGELFHRYDEAPVLIVDTA HHCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECC HFNPVDNDVDFRTLLSRIENMRGRRAFLNLVAS CCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCC >Mature Secondary Structure MLDHLRRIVIEGPVGSGKAALAQRLARHLQAAELPDGARNNPFLERFYREPQRYALAMQL CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH ACLNQRVTQLQQWHSAMLAGQRMIGNFLFARDRVYASLTLEADELALYDALAARLQAPAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHCCHH RVDLVIMLQATPSLLRERIARRGLPGESGIDEQYLQRLTDAYGELFHRYDEAPVLIVDTA HHCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECC HFNPVDNDVDFRTLLSRIENMRGRRAFLNLVAS CCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]