| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94311778
Identifier: 94311778
GI number: 94311778
Start: 3095088
End: 3095672
Strand: Reverse
Name: 94311778
Synonym: Rmet_2846
Alternate gene names: NA
Gene position: 3095672-3095088 (Counterclockwise)
Preceding gene: 94311779
Following gene: 335055634
Centisome position: 78.81
GC content: 61.03
Gene sequence:
>585_bases ATGAACGCCCCTGTGCTGGTAGTGGACCTTGAGGCGACGTGCTCGGAGGACATGGCGGCAGGATGGGAGATGGAGACGGC AGAAATCGGTGCGGTCTGGGTCCGGGGCAACGGCACCGTGCTCGATCACTTTCAGTCGTTCGTTCGACCGGTCGTGAATC CCCAGCTCACCGCGTTCTTTACCAACCTGACCGGCATTAGTCAAAGCGACGTCGATGATGCCCCGTTGTTCACGGTGGCG GCAGAGCAGCTGCGCCAGTTCGTCGAGCGGTACCAGATGCCGGGGTCGATCTGGGTCAGCTGGGGTGCTTGGGATGCCCG GCAGCTTTTGCGAGACTCCGCCCGGTACCGGATTGCCGAACCGATTGCGCTACCACACCAAAACGGGAAGAGGCTATTCG CGAAGGCGCAGAAGATCGGAAAGGAAGTGGGCATGGCAAAAGCCTGCCAACTCGCGGGCCAAACTATCGCGGGCACCCAT CATCGTGCCCTGGACGATGCCATGAGTATTGTCGGCCTGTTGCCGTTCGTGTTCGGTGAGAAGCTGTTGAGGGCGCAGCA CCAGGCAAACCACTCTGCCCCATAG
Upstream 100 bases:
>100_bases CGCTGCAGGTTCTAAAAAATTACAGCCACCTCAGGGCTGAATGGCTAGCTCAGAAAATGAATCAAGCGGCGAGTTCTCAG GGCCTGGCGGCGCGGCAGCT
Downstream 100 bases:
>100_bases ACATTCACCGTTCGTTCCTCCGAGGCCCGCCTGGACCATCGGGAGAAACACGACATCAGCGGGTTGCGAGAGGCCCATCG GTAGAAGCACGAAAGGCCTG
Product: 3'-5' Exonuclease
Products: NA
Alternate protein names: Exonuclease; Exonuclease Superfamily Protein; Inhibitor Of KinA Pathway Sporulation Exonuclease; Exonuclease Superfamily; EXOIII Family Exonuclease
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MNAPVLVVDLEATCSEDMAAGWEMETAEIGAVWVRGNGTVLDHFQSFVRPVVNPQLTAFFTNLTGISQSDVDDAPLFTVA AEQLRQFVERYQMPGSIWVSWGAWDARQLLRDSARYRIAEPIALPHQNGKRLFAKAQKIGKEVGMAKACQLAGQTIAGTH HRALDDAMSIVGLLPFVFGEKLLRAQHQANHSAP
Sequences:
>Translated_194_residues MNAPVLVVDLEATCSEDMAAGWEMETAEIGAVWVRGNGTVLDHFQSFVRPVVNPQLTAFFTNLTGISQSDVDDAPLFTVA AEQLRQFVERYQMPGSIWVSWGAWDARQLLRDSARYRIAEPIALPHQNGKRLFAKAQKIGKEVGMAKACQLAGQTIAGTH HRALDDAMSIVGLLPFVFGEKLLRAQHQANHSAP >Mature_194_residues MNAPVLVVDLEATCSEDMAAGWEMETAEIGAVWVRGNGTVLDHFQSFVRPVVNPQLTAFFTNLTGISQSDVDDAPLFTVA AEQLRQFVERYQMPGSIWVSWGAWDARQLLRDSARYRIAEPIALPHQNGKRLFAKAQKIGKEVGMAKACQLAGQTIAGTH HRALDDAMSIVGLLPFVFGEKLLRAQHQANHSAP
Specific function: Unknown
COG id: COG5018
COG function: function code R; Inhibitor of the KinA pathway to sporulation, predicted exonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21326; Mature: 21326
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPVLVVDLEATCSEDMAAGWEMETAEIGAVWVRGNGTVLDHFQSFVRPVVNPQLTAFF CCCCEEEEECCCCCCHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHH TNLTGISQSDVDDAPLFTVAAEQLRQFVERYQMPGSIWVSWGAWDARQLLRDSARYRIAE HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCC PIALPHQNGKRLFAKAQKIGKEVGMAKACQLAGQTIAGTHHRALDDAMSIVGLLPFVFGE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHH KLLRAQHQANHSAP HHHHHHHHCCCCCC >Mature Secondary Structure MNAPVLVVDLEATCSEDMAAGWEMETAEIGAVWVRGNGTVLDHFQSFVRPVVNPQLTAFF CCCCEEEEECCCCCCHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHH TNLTGISQSDVDDAPLFTVAAEQLRQFVERYQMPGSIWVSWGAWDARQLLRDSARYRIAE HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCC PIALPHQNGKRLFAKAQKIGKEVGMAKACQLAGQTIAGTHHRALDDAMSIVGLLPFVFGE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHH KLLRAQHQANHSAP HHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA