Click here to switch to the map view.

The map label for this gene is scpA [H]

Identifier: 94311705

GI number: 94311705

Start: 3020383

End: 3021288

Strand: Direct

Name: scpA [H]

Synonym: Rmet_2773

Alternate gene names: 94311705

Gene position: 3020383-3021288 (Clockwise)

Preceding gene: 335055630

Following gene: 94311706

Centisome position: 76.89

GC content: 64.57

Gene sequence:

>906_bases
ATGCACCCAAGCGATCCGCAGGAACAGGCCGCGCAGGAAAAGCTGAGCCTGCCGGTCGAACTGCCCAGCGTAGCTGGTGC
CGGTTCCGCCACCAGCGCCGCCGACATGGTCGACGGCCTGGCGTTCGCGCGCCTGTATGGCGAGCCGCTGTTCAAGCTGC
CGCAGGACCTGTACATCCCGCCAGACGCGCTCGAGGTGTTCCTGGAGGCCTTCGAAGGCCCGCTGGACCTGCTGCTGTAC
CTGATCCGCAAGCAGAACTTCAACGTGCTGGACATCCCGATGGCCCAGGTGACGCGTCAGTATCTCTCGTACATCGAGCA
GATCCGCAAGCGCAACCTGGAACTGGCCGCCGAATACCTGCTGATGGCGGCGATGCTCATCGAGATCAAGTCCCGCATGC
TGCTGCCGGTGAAGAAGGCCGACAGCGACGAGGAAGCCGAGGATCCGCGTGCGGAACTGGTGCGGCGTCTGCTGGAATAC
GAGCAGATGAAGCTGGCCGCCCAGCGCCTGGACACGGTGCCGCAGCTCGGCCGCGACTTCCTGCGCTCGCAGGTATTCAT
CGAGCAAAGCCTGGCGCCCCGCTTCCCCGACGTGGAAACGCTGGACCTGCAGTCCGCCTGGGCCGACGTGCTCAGACGCG
CCAAGCTGAACCAGCACCACAAGATCTCGCGCGAGGAACTGTCCGTGCGCGAGCACATGAGCCAGATCCTGCGCCGGCTG
CAGCACGCGCGCTTCATGGAATTCAGCGAACTGTTCGAAGATGCGATCCGGTCCGGCAAGGGGGTGCCCGTGGTAGTGGT
GAACTTCATCGCCATGCTCGAGCTCTCGCGCGAATCGCTGGTCGAGATCACGCAGGCCGAGCCGTTCGCGCCAATCTATG
TGCGATTGGCGTACACGCCCGCGTAG

Upstream 100 bases:

>100_bases
ATCGATCTGGAGGAGCGCGCTCGCGCCGACGCGTCGCGCGTGGCCCAGAAGCCGTACGTGTACGCCTCCGAGAACTGATC
TCCCCGCCGGGACGCCCCCG

Downstream 100 bases:

>100_bases
ACTTACCCGGATATCGGACAATACGAAGGGCGTCGCGCGGCCTGAAGCCGCGATGATGCTCTACAATCCGCCGACAGCCC
GGCCGACGTCTGCCATGAGA

Product: Chromosome segregation and condensation protein ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MHPSDPQEQAAQEKLSLPVELPSVAGAGSATSAADMVDGLAFARLYGEPLFKLPQDLYIPPDALEVFLEAFEGPLDLLLY
LIRKQNFNVLDIPMAQVTRQYLSYIEQIRKRNLELAAEYLLMAAMLIEIKSRMLLPVKKADSDEEAEDPRAELVRRLLEY
EQMKLAAQRLDTVPQLGRDFLRSQVFIEQSLAPRFPDVETLDLQSAWADVLRRAKLNQHHKISREELSVREHMSQILRRL
QHARFMEFSELFEDAIRSGKGVPVVVVNFIAMLELSRESLVEITQAEPFAPIYVRLAYTPA

Sequences:

>Translated_301_residues
MHPSDPQEQAAQEKLSLPVELPSVAGAGSATSAADMVDGLAFARLYGEPLFKLPQDLYIPPDALEVFLEAFEGPLDLLLY
LIRKQNFNVLDIPMAQVTRQYLSYIEQIRKRNLELAAEYLLMAAMLIEIKSRMLLPVKKADSDEEAEDPRAELVRRLLEY
EQMKLAAQRLDTVPQLGRDFLRSQVFIEQSLAPRFPDVETLDLQSAWADVLRRAKLNQHHKISREELSVREHMSQILRRL
QHARFMEFSELFEDAIRSGKGVPVVVVNFIAMLELSRESLVEITQAEPFAPIYVRLAYTPA
>Mature_301_residues
MHPSDPQEQAAQEKLSLPVELPSVAGAGSATSAADMVDGLAFARLYGEPLFKLPQDLYIPPDALEVFLEAFEGPLDLLLY
LIRKQNFNVLDIPMAQVTRQYLSYIEQIRKRNLELAAEYLLMAAMLIEIKSRMLLPVKKADSDEEAEDPRAELVRRLLEY
EQMKLAAQRLDTVPQLGRDFLRSQVFIEQSLAPRFPDVETLDLQSAWADVLRRAKLNQHHKISREELSVREHMSQILRRL
QHARFMEFSELFEDAIRSGKGVPVVVVNFIAMLELSRESLVEITQAEPFAPIYVRLAYTPA

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 34345; Mature: 34345

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPSDPQEQAAQEKLSLPVELPSVAGAGSATSAADMVDGLAFARLYGEPLFKLPQDLYIP
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCC
PDALEVFLEAFEGPLDLLLYLIRKQNFNVLDIPMAQVTRQYLSYIEQIRKRNLELAAEYL
HHHHHHHHHHHCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHH
LMAAMLIEIKSRMLLPVKKADSDEEAEDPRAELVRRLLEYEQMKLAAQRLDTVPQLGRDF
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRSQVFIEQSLAPRFPDVETLDLQSAWADVLRRAKLNQHHKISREELSVREHMSQILRRL
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QHARFMEFSELFEDAIRSGKGVPVVVVNFIAMLELSRESLVEITQAEPFAPIYVRLAYTP
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
A
C
>Mature Secondary Structure
MHPSDPQEQAAQEKLSLPVELPSVAGAGSATSAADMVDGLAFARLYGEPLFKLPQDLYIP
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCC
PDALEVFLEAFEGPLDLLLYLIRKQNFNVLDIPMAQVTRQYLSYIEQIRKRNLELAAEYL
HHHHHHHHHHHCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHH
LMAAMLIEIKSRMLLPVKKADSDEEAEDPRAELVRRLLEYEQMKLAAQRLDTVPQLGRDF
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRSQVFIEQSLAPRFPDVETLDLQSAWADVLRRAKLNQHHKISREELSVREHMSQILRRL
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QHARFMEFSELFEDAIRSGKGVPVVVVNFIAMLELSRESLVEITQAEPFAPIYVRLAYTP
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]