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The map label for this gene is epsF [H]

Identifier: 94311651

GI number: 94311651

Start: 2953329

End: 2954492

Strand: Direct

Name: epsF [H]

Synonym: Rmet_2719

Alternate gene names: 94311651

Gene position: 2953329-2954492 (Clockwise)

Preceding gene: 94311650

Following gene: 94311652

Centisome position: 75.18

GC content: 68.47

Gene sequence:

>1164_bases
ATGGCAGGCACGACCGGGGATACCTCACCCACCGGCGCTCCGATGCGCATCCTGCTGGTTACCACCGGCCTGAAGATGGG
CGGCGCCGAGCACCAGGTAGTGGCGCTGGCACACGCGTTTCTGGCGCAGGGTCAGGCGGTGGCCATCCTGAGCCTGTCAC
CGGGCCGCGAGATCGACGTGCCCGCCGATGCGCACGTCCTCGAACTGAACATGAGCAAGACGCCGGCCGGCATGGCACGG
GCGCTCTGGCAGGCACGCGGACTGGTCAAGTCGTGGCGGCCGGACGTGATTCACGCGCACATGATTCACGCCAACGTCTT
CACGCGCCTGCTGACTCGAATCGTCCAGTGCCCGCCGGTGGTCTGTACCGCGCACAGCTTTCGCGAAGGCGGCCGACTGC
GGATGATCGCGTATCGGCTGACCGACCGATGGAGCGCGCTGACGACCCACGTCAGCGAGGACGGGCGCGAAGGCATGGTC
GCCTCGGGTGCCGTGCAAGCCGACCGCATTGCGGTGATGCCGAATGGCATCGACATCGAACGGTTTCGGCCCTCGGCGGC
GTTGCGGGGCACCACGCGCGCGCGTCTGGGCATCAGCGCTGGAACAAGGCTGGCCCTGAATGTCGGGCGACTGGTTCCGG
AGAAGGCACAAGCGCTTCTGCTGCGCGCCTTCGCGCAGATCGACCCCGCCACGCTTCCGCTCCATCTGCTGATCGCCGGT
GGCGGCCCACTCCATCAGGCCCTGGCCGAGCAGATCACGGCGCTGAACCTGAGTTCGCGCGTCACGCTGCTGGGGCCACG
CAGCGACGTGCCCGCCCTGCTCAACGCAGCGGATACGTTCGTGCTCTCTTCCGACATTGAAGGACTGCCGATGGTGCTGG
TGGAAGCGCTGGCCAGCGGCTGCCCTGTGGTAGCCACCGATGCACCCGGCGTTCGAGAAGTCGTGCAGGACCAGGGGACC
ATCGTGCCGCGCGACGACGCGACAGCGCTGGCCGTCGCGCTGGATGCAGCGCTGCGCCACGGGCGAGGTTCGTCCGCGGA
CGAAGCCGCACGCCGGGCGGCAATGATCGCCAGGTTCTCGATCGACGCGGTGGCGCAACGCTGGCTGGAGATCTACACCG
GCCTCGCCGGCACAACCCCCTGCCCCCGTGTGGAGGCTGCCTGA

Upstream 100 bases:

>100_bases
GCTACGACCTCTACTACGTCAAGCACTGCTCCTTCGCACTCGACCTGCTGATTGCCGTCAAAACCGTGCGCACGCTGCTG
ACCGGGTACGGAGCGCGTTG

Downstream 100 bases:

>100_bases
TGCGGCGGCGCGTGGCGGGCAATCTGCTCTGGATGCTGGCCGAACGCGGCTTCCAGATCGGCATCGGCATTGCCGTGGTG
GCCATGCTGGCGCGCGCGCT

Product: putative glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MAGTTGDTSPTGAPMRILLVTTGLKMGGAEHQVVALAHAFLAQGQAVAILSLSPGREIDVPADAHVLELNMSKTPAGMAR
ALWQARGLVKSWRPDVIHAHMIHANVFTRLLTRIVQCPPVVCTAHSFREGGRLRMIAYRLTDRWSALTTHVSEDGREGMV
ASGAVQADRIAVMPNGIDIERFRPSAALRGTTRARLGISAGTRLALNVGRLVPEKAQALLLRAFAQIDPATLPLHLLIAG
GGPLHQALAEQITALNLSSRVTLLGPRSDVPALLNAADTFVLSSDIEGLPMVLVEALASGCPVVATDAPGVREVVQDQGT
IVPRDDATALAVALDAALRHGRGSSADEAARRAAMIARFSIDAVAQRWLEIYTGLAGTTPCPRVEAA

Sequences:

>Translated_387_residues
MAGTTGDTSPTGAPMRILLVTTGLKMGGAEHQVVALAHAFLAQGQAVAILSLSPGREIDVPADAHVLELNMSKTPAGMAR
ALWQARGLVKSWRPDVIHAHMIHANVFTRLLTRIVQCPPVVCTAHSFREGGRLRMIAYRLTDRWSALTTHVSEDGREGMV
ASGAVQADRIAVMPNGIDIERFRPSAALRGTTRARLGISAGTRLALNVGRLVPEKAQALLLRAFAQIDPATLPLHLLIAG
GGPLHQALAEQITALNLSSRVTLLGPRSDVPALLNAADTFVLSSDIEGLPMVLVEALASGCPVVATDAPGVREVVQDQGT
IVPRDDATALAVALDAALRHGRGSSADEAARRAAMIARFSIDAVAQRWLEIYTGLAGTTPCPRVEAA
>Mature_386_residues
AGTTGDTSPTGAPMRILLVTTGLKMGGAEHQVVALAHAFLAQGQAVAILSLSPGREIDVPADAHVLELNMSKTPAGMARA
LWQARGLVKSWRPDVIHAHMIHANVFTRLLTRIVQCPPVVCTAHSFREGGRLRMIAYRLTDRWSALTTHVSEDGREGMVA
SGAVQADRIAVMPNGIDIERFRPSAALRGTTRARLGISAGTRLALNVGRLVPEKAQALLLRAFAQIDPATLPLHLLIAGG
GPLHQALAEQITALNLSSRVTLLGPRSDVPALLNAADTFVLSSDIEGLPMVLVEALASGCPVVATDAPGVREVVQDQGTI
VPRDDATALAVALDAALRHGRGSSADEAARRAAMIARFSIDAVAQRWLEIYTGLAGTTPCPRVEAA

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1788357, Length=169, Percent_Identity=31.3609467455621, Blast_Score=69, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17532709, Length=396, Percent_Identity=24.7474747474747, Blast_Score=76, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI9755344, Length=232, Percent_Identity=27.5862068965517, Blast_Score=92, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 40779; Mature: 40648

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGTTGDTSPTGAPMRILLVTTGLKMGGAEHQVVALAHAFLAQGQAVAILSLSPGREIDV
CCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEECC
PADAHVLELNMSKTPAGMARALWQARGLVKSWRPDVIHAHMIHANVFTRLLTRIVQCPPV
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCE
VCTAHSFREGGRLRMIAYRLTDRWSALTTHVSEDGREGMVASGAVQADRIAVMPNGIDIE
EEECHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCEECCCCCCCEEEECCCCCCHH
RFRPSAALRGTTRARLGISAGTRLALNVGRLVPEKAQALLLRAFAQIDPATLPLHLLIAG
HCCCCHHHCCCCHHEEECCCCCEEEEEHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEC
GGPLHQALAEQITALNLSSRVTLLGPRSDVPALLNAADTFVLSSDIEGLPMVLVEALASG
CCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHEEEECCCCCHHHHHHHHHHCC
CPVVATDAPGVREVVQDQGTIVPRDDATALAVALDAALRHGRGSSADEAARRAAMIARFS
CCEEECCCCCHHHHHHCCCCEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
IDAVAQRWLEIYTGLAGTTPCPRVEAA
HHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGTTGDTSPTGAPMRILLVTTGLKMGGAEHQVVALAHAFLAQGQAVAILSLSPGREIDV
CCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEECC
PADAHVLELNMSKTPAGMARALWQARGLVKSWRPDVIHAHMIHANVFTRLLTRIVQCPPV
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCE
VCTAHSFREGGRLRMIAYRLTDRWSALTTHVSEDGREGMVASGAVQADRIAVMPNGIDIE
EEECHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCEECCCCCCCEEEECCCCCCHH
RFRPSAALRGTTRARLGISAGTRLALNVGRLVPEKAQALLLRAFAQIDPATLPLHLLIAG
HCCCCHHHCCCCHHEEECCCCCEEEEEHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEC
GGPLHQALAEQITALNLSSRVTLLGPRSDVPALLNAADTFVLSSDIEGLPMVLVEALASG
CCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHEEEECCCCCHHHHHHHHHHCC
CPVVATDAPGVREVVQDQGTIVPRDDATALAVALDAALRHGRGSSADEAARRAAMIARFS
CCEEECCCCCHHHHHHCCCCEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
IDAVAQRWLEIYTGLAGTTPCPRVEAA
HHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]