| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94311530
Identifier: 94311530
GI number: 94311530
Start: 2820599
End: 2821888
Strand: Reverse
Name: 94311530
Synonym: Rmet_2594
Alternate gene names: NA
Gene position: 2821888-2820599 (Counterclockwise)
Preceding gene: 94311533
Following gene: 94311528
Centisome position: 71.84
GC content: 63.72
Gene sequence:
>1290_bases ATGACATATCCTGCGAAGCTGACTGCAGTGTCCTTTGCTTGCCTGACCATCGCGTTGGCGGGTTGCGGAGGAGGGGGCGA TTCCACGCCAACGAGTGCCACCACCTCGAGCACGGGAACGCAGGCGACCACGCCGACCACGCCGACAACGCAGTCTCCGA CCGTCCAGCGCAATACGCTTCTGTCAGGCATCACGGATCCTGGTCCGAATGTCGGCAACGATGGGGACTTCTATATCAAT ACCGCCACCTGGATGATCTTTGGGCCCAAGGCCAATGGCGTGTGGCCGACGGGCGTGTCTCTGGCGGGGCCCGCAGGTGT GAATGGCACCAAGGGCGCGGCGGGCGCCACCGGAAATACCGGCGCAGCCGGCAACACCATTCTTTCTGGCTCGGTCGACC CGACCGACAGCGTTGGCAATAACGGGGACTTTTACATCAACACCGCAACGTCCACGTTGTTCGGGCCCAAGGCCAATGGC ACGTGGCCACCGGGTACTTCGCTGGTGGGGCCGGCTGGCCCGAGCGGAAACCCCGGCGCGCCTGGCACCAACGGCAGCGC CGTGCTGTCTGGCAGCGGCGCTCCCGGCAACACCATTGGCAACAATGGCGACTTCTATCTCGACACCAGTACCTGGACGA TCTACGGGCCGAAGGCCAATGGCGTCTGGCCGGCGGGCGTATCGCTGATCAACCAGGGTTCCAGCGGCAGCGGCAGCGGT ACTGGCACTGGTGCGGGCAGCGGTTCCGACACCGGCGGCCACATCCTGTCCGGGAGCGGCGCTCCGTCCGACAGCATCGG GGTCGACGGCGACTTCTATCTCGATACCACAACGTTCACCCTCTACGGTCCCAAGACGGGGGGCAAGTGGCCTGGCACCG GTATCACCATGACCACCGGCACCGTCTACAGCGGCAACTTCAACGTGCCCGACACCTTGAGCCGTGGCGCGTATGTCATG ACTGGCGACGGCGGCGCGGTGGCCTTGCCGAGCGATTTTGGTGTCACGATCCCGTACGACTGTAAAAGCGTTAGCCTGAC GGCCACGACGCTTGGCAAACCTACGGGCGTGTTGAACCTGGCTGTGTTCAAGGTCACGGGCTCTGGCGCTTCCGCGACGT ACGCACCGGTCAGCGGGTTGAATTGCAAGATCAGCAATGGTCAGCAGAACTGCAGCGTGCAGGCTCCGGCAGGTGCGATA GCACATGGCGACAAGCTGCAGGTACAGCTCGACAACAACCAGGCAACGGGCTGGGGCGGTCTCTCGGTCAACCTCGCGTG TTCGCTATAG
Upstream 100 bases:
>100_bases TCCAACGTAACGCCAGGGGATACGGTAGCCATACGGTTGTCGCGCTCATGGCGAGCCATCGAACAACGCGTACAGGGAAA TCAGAACAAGGGGGAGCCGT
Downstream 100 bases:
>100_bases CCTGATGATGACCGCTGCTGGATACCGCGGTCATCATGCGTGCAGCGGGACGTCGTGTCCCGCTGCACGCTATTGGCAAT CGCCGGCATCGGGCTGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MTYPAKLTAVSFACLTIALAGCGGGGDSTPTSATTSSTGTQATTPTTPTTQSPTVQRNTLLSGITDPGPNVGNDGDFYIN TATWMIFGPKANGVWPTGVSLAGPAGVNGTKGAAGATGNTGAAGNTILSGSVDPTDSVGNNGDFYINTATSTLFGPKANG TWPPGTSLVGPAGPSGNPGAPGTNGSAVLSGSGAPGNTIGNNGDFYLDTSTWTIYGPKANGVWPAGVSLINQGSSGSGSG TGTGAGSGSDTGGHILSGSGAPSDSIGVDGDFYLDTTTFTLYGPKTGGKWPGTGITMTTGTVYSGNFNVPDTLSRGAYVM TGDGGAVALPSDFGVTIPYDCKSVSLTATTLGKPTGVLNLAVFKVTGSGASATYAPVSGLNCKISNGQQNCSVQAPAGAI AHGDKLQVQLDNNQATGWGGLSVNLACSL
Sequences:
>Translated_429_residues MTYPAKLTAVSFACLTIALAGCGGGGDSTPTSATTSSTGTQATTPTTPTTQSPTVQRNTLLSGITDPGPNVGNDGDFYIN TATWMIFGPKANGVWPTGVSLAGPAGVNGTKGAAGATGNTGAAGNTILSGSVDPTDSVGNNGDFYINTATSTLFGPKANG TWPPGTSLVGPAGPSGNPGAPGTNGSAVLSGSGAPGNTIGNNGDFYLDTSTWTIYGPKANGVWPAGVSLINQGSSGSGSG TGTGAGSGSDTGGHILSGSGAPSDSIGVDGDFYLDTTTFTLYGPKTGGKWPGTGITMTTGTVYSGNFNVPDTLSRGAYVM TGDGGAVALPSDFGVTIPYDCKSVSLTATTLGKPTGVLNLAVFKVTGSGASATYAPVSGLNCKISNGQQNCSVQAPAGAI AHGDKLQVQLDNNQATGWGGLSVNLACSL >Mature_428_residues TYPAKLTAVSFACLTIALAGCGGGGDSTPTSATTSSTGTQATTPTTPTTQSPTVQRNTLLSGITDPGPNVGNDGDFYINT ATWMIFGPKANGVWPTGVSLAGPAGVNGTKGAAGATGNTGAAGNTILSGSVDPTDSVGNNGDFYINTATSTLFGPKANGT WPPGTSLVGPAGPSGNPGAPGTNGSAVLSGSGAPGNTIGNNGDFYLDTSTWTIYGPKANGVWPAGVSLINQGSSGSGSGT GTGAGSGSDTGGHILSGSGAPSDSIGVDGDFYLDTTTFTLYGPKTGGKWPGTGITMTTGTVYSGNFNVPDTLSRGAYVMT GDGGAVALPSDFGVTIPYDCKSVSLTATTLGKPTGVLNLAVFKVTGSGASATYAPVSGLNCKISNGQQNCSVQAPAGAIA HGDKLQVQLDNNQATGWGGLSVNLACSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41854; Mature: 41723
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYPAKLTAVSFACLTIALAGCGGGGDSTPTSATTSSTGTQATTPTTPTTQSPTVQRNTL CCCCCCHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHH LSGITDPGPNVGNDGDFYINTATWMIFGPKANGVWPTGVSLAGPAGVNGTKGAAGATGNT HHCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC GAAGNTILSGSVDPTDSVGNNGDFYINTATSTLFGPKANGTWPPGTSLVGPAGPSGNPGA CCCCCEEEECCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC PGTNGSAVLSGSGAPGNTIGNNGDFYLDTSTWTIYGPKANGVWPAGVSLINQGSSGSGSG CCCCCCEEEECCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCCCCHHEEECCCCCCCCC TGTGAGSGSDTGGHILSGSGAPSDSIGVDGDFYLDTTTFTLYGPKTGGKWPGTGITMTTG CCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCEEEEEC TVYSGNFNVPDTLSRGAYVMTGDGGAVALPSDFGVTIPYDCKSVSLTATTLGKPTGVLNL EEEECCCCCCCHHCCCEEEEECCCCEEEECCCCCEECCCCCCEEEEEEEECCCCCCEEEE AVFKVTGSGASATYAPVSGLNCKISNGQQNCSVQAPAGAIAHGDKLQVQLDNNQATGWGG EEEEEECCCCCEEECCCCCCEEEECCCCCCCEEECCCCCEECCCEEEEEECCCCCCCCCC LSVNLACSL EEEEEEEEC >Mature Secondary Structure TYPAKLTAVSFACLTIALAGCGGGGDSTPTSATTSSTGTQATTPTTPTTQSPTVQRNTL CCCCCHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHH LSGITDPGPNVGNDGDFYINTATWMIFGPKANGVWPTGVSLAGPAGVNGTKGAAGATGNT HHCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC GAAGNTILSGSVDPTDSVGNNGDFYINTATSTLFGPKANGTWPPGTSLVGPAGPSGNPGA CCCCCEEEECCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC PGTNGSAVLSGSGAPGNTIGNNGDFYLDTSTWTIYGPKANGVWPAGVSLINQGSSGSGSG CCCCCCEEEECCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCCCCHHEEECCCCCCCCC TGTGAGSGSDTGGHILSGSGAPSDSIGVDGDFYLDTTTFTLYGPKTGGKWPGTGITMTTG CCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCEEEEEC TVYSGNFNVPDTLSRGAYVMTGDGGAVALPSDFGVTIPYDCKSVSLTATTLGKPTGVLNL EEEECCCCCCCHHCCCEEEEECCCCEEEECCCCCEECCCCCCEEEEEEEECCCCCCEEEE AVFKVTGSGASATYAPVSGLNCKISNGQQNCSVQAPAGAIAHGDKLQVQLDNNQATGWGG EEEEEECCCCCEEECCCCCCEEEECCCCCCCEEECCCCCEECCCEEEEEECCCCCCCCCC LSVNLACSL EEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA