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The map label for this gene is phoD [H]

Identifier: 94311519

GI number: 94311519

Start: 2807714

End: 2809417

Strand: Direct

Name: phoD [H]

Synonym: Rmet_2583

Alternate gene names: 94311519

Gene position: 2807714-2809417 (Clockwise)

Preceding gene: 94311517

Following gene: 94311522

Centisome position: 71.48

GC content: 66.08

Gene sequence:

>1704_bases
ATGTCAACAACATGTCACATCCACGCGCGACGATGTTGCCCCGGCTCAAGCGCCGACCATACAACCCAGACAAAGCGTTC
CACCACGGACTCCACCATGACCACCACCCCGCTCGCCGAGCCCAGCGATCTGACCCGACGCAGGTTCCTGCGCACTTCCC
GGCGCTTTCTGGGCCTGGGCGCCAGTCTGGCGCTGGTGGGACCGGCGGTGCTCGCGGCCCCGGCCGTGGTGTCGAGCGGA
CGCCCGAACACGCCCGACGGCATCCAGCTTGGCGATCCGTCGGATGACGGGCTGGTGGTCTGGGCACGCGCCGAGCGTCA
GTCGCGCATGGTGGTCGAATACGCCGCCGAGCCGGGTTTCCGCAATCCGATGCGCATTTCGGGCCCGCTGGCGACCAGTG
AAGCCGACTTCACCGCCCGCACCGTGCTGACCGGCCTGCTGCCGGGTCAGCAATACCACGTGCGCGTCGCATTCGAGAAC
CCCGAGCAACGCCGTGGCATGGGCGCCTGGACGGAGGGTTCGTTCCGCACCCCGTCCCAGCAGGCCGATCGCCCGATCCG
CTTCGTCTGGTCGGGCGATACGGTCGGCCAGGGCTGGGGCATCAACCCCGACCTCGGCGGGATGCGCATCTATGAAGCGA
TGCGCCAGCGCAACCCGGACTTCTTCATCCACAGCGGCGACACAATCTACGCGGACAGCCCGATCACGGCCGAGCAGAAA
GCCGAGGATGGCCGCATCTGGCGCAACCTGGTGACGGAGGAAGTCAGCAAGGTCGCCGAGACGCTGAAGGAGTTCCGCGG
CCGTCATCGCTACAACATGATGGACACCAACGTGCGCCGCTTTGCGAGCCAGGTCCCGCAAATCTGGCAGTGGGACGACC
ACGAGATCACCAACAACTGGTCAGACTCGAAGGATCTCTCCGGCGACGCGCGCTACACGGAAAAAGACGTGCGCGTGCTG
GTGGCGCGCGGCAGCCGCGCCTTCCTGGAAAACGCGCCGATGCGCTGGCACCGCCAGGGGCTGGCCGAGCGCGTGCATCG
CAAGATCGGCTACGGACCACTGCTCGACGTGTTCGTGCTCGACATGCGCAGTTTCCGCGGTCCAAATGGATATAACCGCG
AGACGACCGAAAGCGCGGCCACGGCATTCCTCGGCAATGCGCAACTCGAATGGCTGGTGGCGGAACTGATGGCATCGCAG
GCCACCTGGAAGGTCATCGCCGCTGATATGCCGATCGGCCTCGGCGTGCCCGATGGCAAGGACGCACAGGGGCGTCCGCG
CTGGGAAGCCATCGCCAACGGCGACGGTCCGGCGCTGGGACGCGAACTGGAAACCGCCCGACTGCTCACGCGCATCCGAC
AGGCTGGCATCAAGAACGTGGTGTGGGTGACGGCGGACGTGCACTACTGCGCCGCCCACCACTACTCGCCGGAACGCGCG
GTGTACAAGGATTTCGATCCGTTCTGGGAATTCGTGGCCGGCCCGCTCAATGCAGGCAGCTTCGGCCCGAACCCGCTCGA
CAACACGTTCGGGCCGCATGTCGCATTCCAGAAGGCACCCACCGCGCAGAACATGTCGCCGTTTGCCGGCTATCAGTTCT
TCGGCGAGGTCAACATCGACCCCGCCTCGCGCGCGCTGACCGTCGATCTGCGTGACCTGAACGGCGTGTCCCAGTATTCG
CAGATGCTGCAGGCGCAGGCCTGA

Upstream 100 bases:

>100_bases
CCGGACAAAGGGTGAATTGCCCGGAAAATCAAAGACTTGGATTCTACCATTACTGCCCGGGCGCGGTCATCCCGGACGCT
AGCCAGTATCGGCGCCTGCG

Downstream 100 bases:

>100_bases
GCGTCCTCGCGAAGCCGCCGACCGAAACACCGGGCGGCGGTGTCAATCACCGGTATCAATCGCCGCTATCAATCGCTCTT
GATACCGTTGTCCTGAATGA

Product: phosphodiesterase/alkaline phosphatase D

Products: NA

Alternate protein names: APaseD [H]

Number of amino acids: Translated: 567; Mature: 566

Protein sequence:

>567_residues
MSTTCHIHARRCCPGSSADHTTQTKRSTTDSTMTTTPLAEPSDLTRRRFLRTSRRFLGLGASLALVGPAVLAAPAVVSSG
RPNTPDGIQLGDPSDDGLVVWARAERQSRMVVEYAAEPGFRNPMRISGPLATSEADFTARTVLTGLLPGQQYHVRVAFEN
PEQRRGMGAWTEGSFRTPSQQADRPIRFVWSGDTVGQGWGINPDLGGMRIYEAMRQRNPDFFIHSGDTIYADSPITAEQK
AEDGRIWRNLVTEEVSKVAETLKEFRGRHRYNMMDTNVRRFASQVPQIWQWDDHEITNNWSDSKDLSGDARYTEKDVRVL
VARGSRAFLENAPMRWHRQGLAERVHRKIGYGPLLDVFVLDMRSFRGPNGYNRETTESAATAFLGNAQLEWLVAELMASQ
ATWKVIAADMPIGLGVPDGKDAQGRPRWEAIANGDGPALGRELETARLLTRIRQAGIKNVVWVTADVHYCAAHHYSPERA
VYKDFDPFWEFVAGPLNAGSFGPNPLDNTFGPHVAFQKAPTAQNMSPFAGYQFFGEVNIDPASRALTVDLRDLNGVSQYS
QMLQAQA

Sequences:

>Translated_567_residues
MSTTCHIHARRCCPGSSADHTTQTKRSTTDSTMTTTPLAEPSDLTRRRFLRTSRRFLGLGASLALVGPAVLAAPAVVSSG
RPNTPDGIQLGDPSDDGLVVWARAERQSRMVVEYAAEPGFRNPMRISGPLATSEADFTARTVLTGLLPGQQYHVRVAFEN
PEQRRGMGAWTEGSFRTPSQQADRPIRFVWSGDTVGQGWGINPDLGGMRIYEAMRQRNPDFFIHSGDTIYADSPITAEQK
AEDGRIWRNLVTEEVSKVAETLKEFRGRHRYNMMDTNVRRFASQVPQIWQWDDHEITNNWSDSKDLSGDARYTEKDVRVL
VARGSRAFLENAPMRWHRQGLAERVHRKIGYGPLLDVFVLDMRSFRGPNGYNRETTESAATAFLGNAQLEWLVAELMASQ
ATWKVIAADMPIGLGVPDGKDAQGRPRWEAIANGDGPALGRELETARLLTRIRQAGIKNVVWVTADVHYCAAHHYSPERA
VYKDFDPFWEFVAGPLNAGSFGPNPLDNTFGPHVAFQKAPTAQNMSPFAGYQFFGEVNIDPASRALTVDLRDLNGVSQYS
QMLQAQA
>Mature_566_residues
STTCHIHARRCCPGSSADHTTQTKRSTTDSTMTTTPLAEPSDLTRRRFLRTSRRFLGLGASLALVGPAVLAAPAVVSSGR
PNTPDGIQLGDPSDDGLVVWARAERQSRMVVEYAAEPGFRNPMRISGPLATSEADFTARTVLTGLLPGQQYHVRVAFENP
EQRRGMGAWTEGSFRTPSQQADRPIRFVWSGDTVGQGWGINPDLGGMRIYEAMRQRNPDFFIHSGDTIYADSPITAEQKA
EDGRIWRNLVTEEVSKVAETLKEFRGRHRYNMMDTNVRRFASQVPQIWQWDDHEITNNWSDSKDLSGDARYTEKDVRVLV
ARGSRAFLENAPMRWHRQGLAERVHRKIGYGPLLDVFVLDMRSFRGPNGYNRETTESAATAFLGNAQLEWLVAELMASQA
TWKVIAADMPIGLGVPDGKDAQGRPRWEAIANGDGPALGRELETARLLTRIRQAGIKNVVWVTADVHYCAAHHYSPERAV
YKDFDPFWEFVAGPLNAGSFGPNPLDNTFGPHVAFQKAPTAQNMSPFAGYQFFGEVNIDPASRALTVDLRDLNGVSQYSQ
MLQAQA

Specific function: Unknown

COG id: COG3540

COG function: function code P; Phosphodiesterase/alkaline phosphatase D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhoD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018946
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09423 PhoD [H]

EC number: =3.1.3.1 [H]

Molecular weight: Translated: 63024; Mature: 62893

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTCHIHARRCCPGSSADHTTQTKRSTTDSTMTTTPLAEPSDLTRRRFLRTSRRFLGLG
CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCC
ASLALVGPAVLAAPAVVSSGRPNTPDGIQLGDPSDDGLVVWARAERQSRMVVEYAAEPGF
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCC
RNPMRISGPLATSEADFTARTVLTGLLPGQQYHVRVAFENPEQRRGMGAWTEGSFRTPSQ
CCCCEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCHHHCCCCCCCCCCCCCCHH
QADRPIRFVWSGDTVGQGWGINPDLGGMRIYEAMRQRNPDFFIHSGDTIYADSPITAEQK
HCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCEEEECCCCCHHHC
AEDGRIWRNLVTEEVSKVAETLKEFRGRHRYNMMDTNVRRFASQVPQIWQWDDHEITNNW
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHCCCCCCCCCCCC
SDSKDLSGDARYTEKDVRVLVARGSRAFLENAPMRWHRQGLAERVHRKIGYGPLLDVFVL
CCCCCCCCCCCCCHHCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
DMRSFRGPNGYNRETTESAATAFLGNAQLEWLVAELMASQATWKVIAADMPIGLGVPDGK
HHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC
DAQGRPRWEAIANGDGPALGRELETARLLTRIRQAGIKNVVWVTADVHYCAAHHYSPERA
CCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHCCCCCCC
VYKDFDPFWEFVAGPLNAGSFGPNPLDNTFGPHVAFQKAPTAQNMSPFAGYQFFGEVNID
HHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCC
PASRALTVDLRDLNGVSQYSQMLQAQA
CCCCEEEEEHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure 
STTCHIHARRCCPGSSADHTTQTKRSTTDSTMTTTPLAEPSDLTRRRFLRTSRRFLGLG
CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCC
ASLALVGPAVLAAPAVVSSGRPNTPDGIQLGDPSDDGLVVWARAERQSRMVVEYAAEPGF
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCC
RNPMRISGPLATSEADFTARTVLTGLLPGQQYHVRVAFENPEQRRGMGAWTEGSFRTPSQ
CCCCEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCHHHCCCCCCCCCCCCCCHH
QADRPIRFVWSGDTVGQGWGINPDLGGMRIYEAMRQRNPDFFIHSGDTIYADSPITAEQK
HCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCEEEECCCCCHHHC
AEDGRIWRNLVTEEVSKVAETLKEFRGRHRYNMMDTNVRRFASQVPQIWQWDDHEITNNW
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHCCCCCCCCCCCC
SDSKDLSGDARYTEKDVRVLVARGSRAFLENAPMRWHRQGLAERVHRKIGYGPLLDVFVL
CCCCCCCCCCCCCHHCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
DMRSFRGPNGYNRETTESAATAFLGNAQLEWLVAELMASQATWKVIAADMPIGLGVPDGK
HHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC
DAQGRPRWEAIANGDGPALGRELETARLLTRIRQAGIKNVVWVTADVHYCAAHHYSPERA
CCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHCCCCCCC
VYKDFDPFWEFVAGPLNAGSFGPNPLDNTFGPHVAFQKAPTAQNMSPFAGYQFFGEVNID
HHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCC
PASRALTVDLRDLNGVSQYSQMLQAQA
CCCCEEEEEHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760916; 9384377; 7704254; 25878 [H]