Click here to switch to the map view.

The map label for this gene is 94311441

Identifier: 94311441

GI number: 94311441

Start: 2719745

End: 2720239

Strand: Reverse

Name: 94311441

Synonym: Rmet_2505

Alternate gene names: NA

Gene position: 2720239-2719745 (Counterclockwise)

Preceding gene: 94311442

Following gene: 94311440

Centisome position: 69.25

GC content: 62.42

Gene sequence:

>495_bases
ATGACCACCAAGCGCTGCTTTCCTCCGGTCGTCGACATTCACACTCGCGTGCTTGTGCTCGGCAGCCTGCCGGGCGAAGT
CTCTCTCGCGCAGTCACGCTATTACGCGCACAAGCAGAATCGTTTCTGGCATTTGATGAGCGATGTGCTTGGCGTCGATC
TGGTCGGCCTCGAGTACGAAGCAAGGCTGCAGGCACTGCTCGACCATCGTGTTGGCCTGTGGGACGTTGTGGCCGAGGCA
CGGCGCGAGGGCAGCCTCGATAGCAGCATCCGCGACCATCAGGGCAACGATCTGATCGGCCTGATCGCGACGCTGCCGAC
GCTCAAGGCCATCGCATTCAATGGCGGCACCGCCGCGAAGATCGGCGAGAAGACGCTTGCGGACCATGGCGATCGCCATG
CGATCCTGCGATTGCCATCGAGCAGCCCGGCTTACACGCTGGCCTATGCGGAAAAACGCAAGGCCTGGGAGAGCCTGCGC
GACTGGCTCGACTGA

Upstream 100 bases:

>100_bases
GTATGAAACGCCTGCCCTCTCACCCGACCTTTCTTCCCGCGCATGGGAAAGGGTATCGCGGGGGAGGGCAGGACTTTCAC
GCTTCCAATACCCCTTCCCG

Downstream 100 bases:

>100_bases
TCCGTCGACGCTGAATTCTGCCGTACGGCCGTGCGCATCTCGGGCGCATGGTTGGCACACGCGCTCGTACGTAGGCGAGA
CCTCGATTTGATGCAACGCA

Product: G:T/U mismatch-specific DNA glycosylase-like protein

Products: NA

Alternate protein names: Uracil-DNA Glycosylase Superfamily Protein; T/U Mismatch-Specific DNA Glycosylase; Uracil-DNA Glycosylase Superfamily; Mug GT/U Mismatch-Specific DNA Glycosylase; G/U Mismatch-Specific DNA Glycosylase; GT/U Mismatch-Specific DNA Glycosylase-Like Protein; DNA Glycosylase; G/U Mismatch-Specific Uracil-DNA Glycosylase; G-T/U Mismatch-Specific DNA Glycosylase-Like; Uracil DNA Glycosylase Superfamily; YjeF-Like Protein; GT/U Mismatch-Specific Uracil/Thymine DNA-Glycosylase

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MTTKRCFPPVVDIHTRVLVLGSLPGEVSLAQSRYYAHKQNRFWHLMSDVLGVDLVGLEYEARLQALLDHRVGLWDVVAEA
RREGSLDSSIRDHQGNDLIGLIATLPTLKAIAFNGGTAAKIGEKTLADHGDRHAILRLPSSSPAYTLAYAEKRKAWESLR
DWLD

Sequences:

>Translated_164_residues
MTTKRCFPPVVDIHTRVLVLGSLPGEVSLAQSRYYAHKQNRFWHLMSDVLGVDLVGLEYEARLQALLDHRVGLWDVVAEA
RREGSLDSSIRDHQGNDLIGLIATLPTLKAIAFNGGTAAKIGEKTLADHGDRHAILRLPSSSPAYTLAYAEKRKAWESLR
DWLD
>Mature_163_residues
TTKRCFPPVVDIHTRVLVLGSLPGEVSLAQSRYYAHKQNRFWHLMSDVLGVDLVGLEYEARLQALLDHRVGLWDVVAEAR
REGSLDSSIRDHQGNDLIGLIATLPTLKAIAFNGGTAAKIGEKTLADHGDRHAILRLPSSSPAYTLAYAEKRKAWESLRD
WLD

Specific function: Unknown

COG id: COG3663

COG function: function code L; G:T/U mismatch-specific DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18270; Mature: 18139

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKRCFPPVVDIHTRVLVLGSLPGEVSLAQSRYYAHKQNRFWHLMSDVLGVDLVGLEYE
CCCCCCCCCHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHH
ARLQALLDHRVGLWDVVAEARREGSLDSSIRDHQGNDLIGLIATLPTLKAIAFNGGTAAK
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHEEECCCCCHH
IGEKTLADHGDRHAILRLPSSSPAYTLAYAEKRKAWESLRDWLD
HHHHHHHCCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTKRCFPPVVDIHTRVLVLGSLPGEVSLAQSRYYAHKQNRFWHLMSDVLGVDLVGLEYE
CCCCCCCCHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHH
ARLQALLDHRVGLWDVVAEARREGSLDSSIRDHQGNDLIGLIATLPTLKAIAFNGGTAAK
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHEEECCCCCHH
IGEKTLADHGDRHAILRLPSSSPAYTLAYAEKRKAWESLRDWLD
HHHHHHHCCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA