| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94311333
Identifier: 94311333
GI number: 94311333
Start: 2607732
End: 2608538
Strand: Direct
Name: 94311333
Synonym: Rmet_2397
Alternate gene names: NA
Gene position: 2607732-2608538 (Clockwise)
Preceding gene: 94311332
Following gene: 94311334
Centisome position: 66.39
GC content: 65.55
Gene sequence:
>807_bases ATGCTCTCGCTGACGGGTGGAGTGCTGGGCCTCATCATCGGAGCCGTGCTGGGATTGACTGGCGCCGGCGGCGGCATCTT CGCGGTGCCGGCGCTGGTGTTCGGCCTGGGCATGGACATCCGTCAGGCCGCGCCCGTGGCGCTGCTCGCCGTGGGAGCAG CGGCGACCCTGGGCGCTTTGCAGGGCTTGCGCCAGGGGGTAGTTCGGTACAAGGCAGCGATGATGTTGGCGGCTGCCGGC GCCGTGACGGCTCCGCTGGGCGTGCAGTTTGCCCACTGGCTTTCGCCTCGATGGCTGAACCTGATCTTCGTCGCCATCAT GCTCGTGGTGGCCTACCGGATGTTCATGTCATCTCGCGGCAGCCAGACGCAGGACGATCTGGCTGACGAGCCAGCCCGGG TCTGCAAGATCTCCAAGGACACCGGCCGCTTCGTCTGGAACGTGCGAACAGCGACCACGCTGGGGAGCATCGGCATCGTC TCCGGTTTGGCCACGGGCATGTTGGGGGTGGGCGGCGGATTCATCATCGTCCCGGCTCTGGCGCATTTCAGCGAGCTGCG CATGCACAGCATCGTCGCGACCTCGCTCATGGTGATCGCGCTGCTGTCCGCTGTAACCGTGTTCATCGCGTGGAGTCATG GCATGACGCTCACCGCGCCCGCCTGGACATTCGTTCTCACGGCGCTCGTGGGCATGTCGCTCGGCCGTGTTCTGGCACGC AGGATTCCCTCAAAGATGCTCCAGCGGGTGTTTTCGATCACCTGCGTGGCCGTGGCGGCCCTCATGCTCATGCGCAATGT TGGCTAG
Upstream 100 bases:
>100_bases GCCGCGCTGAACCAGCCGCCCAGGCGCCGAACCTGATGGCCGCTTCTCTCAGCCCGCATCTCAGGCTGCTCAACGGAAAT TGCACAAAGGATCATTCACT
Downstream 100 bases:
>100_bases AGGTCCGATGTTCGATTAATTGATTGTGGACGGGAAAATTCAATGCAGACAAGGAAAGTAGATGTCGCCATCATTGGCGC GGGAACCGCTGGCAGCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MLSLTGGVLGLIIGAVLGLTGAGGGIFAVPALVFGLGMDIRQAAPVALLAVGAAATLGALQGLRQGVVRYKAAMMLAAAG AVTAPLGVQFAHWLSPRWLNLIFVAIMLVVAYRMFMSSRGSQTQDDLADEPARVCKISKDTGRFVWNVRTATTLGSIGIV SGLATGMLGVGGGFIIVPALAHFSELRMHSIVATSLMVIALLSAVTVFIAWSHGMTLTAPAWTFVLTALVGMSLGRVLAR RIPSKMLQRVFSITCVAVAALMLMRNVG
Sequences:
>Translated_268_residues MLSLTGGVLGLIIGAVLGLTGAGGGIFAVPALVFGLGMDIRQAAPVALLAVGAAATLGALQGLRQGVVRYKAAMMLAAAG AVTAPLGVQFAHWLSPRWLNLIFVAIMLVVAYRMFMSSRGSQTQDDLADEPARVCKISKDTGRFVWNVRTATTLGSIGIV SGLATGMLGVGGGFIIVPALAHFSELRMHSIVATSLMVIALLSAVTVFIAWSHGMTLTAPAWTFVLTALVGMSLGRVLAR RIPSKMLQRVFSITCVAVAALMLMRNVG >Mature_268_residues MLSLTGGVLGLIIGAVLGLTGAGGGIFAVPALVFGLGMDIRQAAPVALLAVGAAATLGALQGLRQGVVRYKAAMMLAAAG AVTAPLGVQFAHWLSPRWLNLIFVAIMLVVAYRMFMSSRGSQTQDDLADEPARVCKISKDTGRFVWNVRTATTLGSIGIV SGLATGMLGVGGGFIIVPALAHFSELRMHSIVATSLMVIALLSAVTVFIAWSHGMTLTAPAWTFVLTALVGMSLGRVLAR RIPSKMLQRVFSITCVAVAALMLMRNVG
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27834; Mature: 27834
Theoretical pI: Translated: 11.95; Mature: 11.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSLTGGVLGLIIGAVLGLTGAGGGIFAVPALVFGLGMDIRQAAPVALLAVGAAATLGAL CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHH QGLRQGVVRYKAAMMLAAAGAVTAPLGVQFAHWLSPRWLNLIFVAIMLVVAYRMFMSSRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC SQTQDDLADEPARVCKISKDTGRFVWNVRTATTLGSIGIVSGLATGMLGVGGGFIIVPAL CCCHHHHHCCHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AHFSELRMHSIVATSLMVIALLSAVTVFIAWSHGMTLTAPAWTFVLTALVGMSLGRVLAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHH RIPSKMLQRVFSITCVAVAALMLMRNVG HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLSLTGGVLGLIIGAVLGLTGAGGGIFAVPALVFGLGMDIRQAAPVALLAVGAAATLGAL CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHH QGLRQGVVRYKAAMMLAAAGAVTAPLGVQFAHWLSPRWLNLIFVAIMLVVAYRMFMSSRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC SQTQDDLADEPARVCKISKDTGRFVWNVRTATTLGSIGIVSGLATGMLGVGGGFIIVPAL CCCHHHHHCCHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AHFSELRMHSIVATSLMVIALLSAVTVFIAWSHGMTLTAPAWTFVLTALVGMSLGRVLAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHH RIPSKMLQRVFSITCVAVAALMLMRNVG HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA