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The map label for this gene is armR [H]

Identifier: 94311320

GI number: 94311320

Start: 2596766

End: 2597434

Strand: Reverse

Name: armR [H]

Synonym: Rmet_2384

Alternate gene names: 94311320

Gene position: 2597434-2596766 (Counterclockwise)

Preceding gene: 94311337

Following gene: 94311305

Centisome position: 66.12

GC content: 65.02

Gene sequence:

>669_bases
ATGCGAATACTGTTGGTGGAAGACGACAAACTGATCGGACGGGGGATCGTGGCCGGTCTGCACAAGCACGGCATCGCGGT
GCATCACGTCGGCACCGCAGAAGAAGCCGAAGCCACGCATGCGGAAGACACCTTCCATGCCCTGGTGCTCGATCTCGGGC
TGCCTGACCGGGACGGCATGGAGTTGCTGGCCAGCATGCGGGCCGTCGAACCTCAATTGCCCGTCCTGATCCTCACGGCG
CGGGACGCCATCGAACACAGGCTCAAAGGGCTGCATGAAGGTGCCGACGACTACATGATCAAACCGTTCGACCTGCGTGA
ACTCGCAGCCCGGTTGCATGCGCTGGTCAGACGCACGCAAGGCCGTGCGGCCCAGGTCATCTCGGCCGGTCCCCTGCGGC
TGGAGCCGGAGAGCGGGCTGGCCTGGTTCCAGGGCGAGCCCGTCTCCTTGTCGCGCCGCGAGGTCGATCTGCTGGCCCAT
CTCGCCAACGCCGATGGCCGGTGGGTCCCGCCCGACATGCTCAACGAGCGCTTGTACGGCCTCGGGGAAGAGATCGGCAG
CAACGCGCTGAATGTGCATATCCACAACATCCGCCGCAAGCTCGGCGCCGAAGCCATCGAGACGGTCCGTGGGCTCGGCT
ATCGGCTGGGCTGGAGGCTTGCATCATGA

Upstream 100 bases:

>100_bases
CCGATTAACTGAGAATTAGCGGGAACTTGCGTCCTACCTTGCTGTCATTTCTGGCCTAACATGAGCGTGTCAAACAAGCA
AATTCAGGTTGGTAGGCGCC

Downstream 100 bases:

>100_bases
GCCTGCGGCTGCGCGCCGTTCTGATCGCCGGCATTTCGCTGTTGGTTCTGTGGGGCGCTGCCGCCGGCTGGATGATGCGC
GGCGTTCATTCCAATCTCGA

Product: ArmR, DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MRILLVEDDKLIGRGIVAGLHKHGIAVHHVGTAEEAEATHAEDTFHALVLDLGLPDRDGMELLASMRAVEPQLPVLILTA
RDAIEHRLKGLHEGADDYMIKPFDLRELAARLHALVRRTQGRAAQVISAGPLRLEPESGLAWFQGEPVSLSRREVDLLAH
LANADGRWVPPDMLNERLYGLGEEIGSNALNVHIHNIRRKLGAEAIETVRGLGYRLGWRLAS

Sequences:

>Translated_222_residues
MRILLVEDDKLIGRGIVAGLHKHGIAVHHVGTAEEAEATHAEDTFHALVLDLGLPDRDGMELLASMRAVEPQLPVLILTA
RDAIEHRLKGLHEGADDYMIKPFDLRELAARLHALVRRTQGRAAQVISAGPLRLEPESGLAWFQGEPVSLSRREVDLLAH
LANADGRWVPPDMLNERLYGLGEEIGSNALNVHIHNIRRKLGAEAIETVRGLGYRLGWRLAS
>Mature_222_residues
MRILLVEDDKLIGRGIVAGLHKHGIAVHHVGTAEEAEATHAEDTFHALVLDLGLPDRDGMELLASMRAVEPQLPVLILTA
RDAIEHRLKGLHEGADDYMIKPFDLRELAARLHALVRRTQGRAAQVISAGPLRLEPESGLAWFQGEPVSLSRREVDLLAH
LANADGRWVPPDMLNERLYGLGEEIGSNALNVHIHNIRRKLGAEAIETVRGLGYRLGWRLAS

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC. Currently it is not known whether this effect is direct or not [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=217, Percent_Identity=46.0829493087558, Blast_Score=181, Evalue=2e-47,
Organism=Escherichia coli, GI1790552, Length=216, Percent_Identity=42.5925925925926, Blast_Score=161, Evalue=3e-41,
Organism=Escherichia coli, GI1787375, Length=223, Percent_Identity=34.9775784753363, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=30.9090909090909, Blast_Score=120, Evalue=7e-29,
Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=35.5855855855856, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=31.25, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=31.1111111111111, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1786599, Length=226, Percent_Identity=30.5309734513274, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=32.4561403508772, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1788394, Length=221, Percent_Identity=29.8642533936652, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1786911, Length=221, Percent_Identity=29.8642533936652, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI145693140, Length=229, Percent_Identity=27.9475982532751, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790863, Length=228, Percent_Identity=26.3157894736842, Blast_Score=70, Evalue=8e-14,
Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=33.6448598130841, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1787229, Length=223, Percent_Identity=26.457399103139, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790437, Length=111, Percent_Identity=33.3333333333333, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24493; Mature: 24493

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLVEDDKLIGRGIVAGLHKHGIAVHHVGTAEEAEATHAEDTFHALVLDLGLPDRDGM
CEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHCCHHHHHHHHHEECCCCCCCHH
ELLASMRAVEPQLPVLILTARDAIEHRLKGLHEGADDYMIKPFDLRELAARLHALVRRTQ
HHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHC
GRAAQVISAGPLRLEPESGLAWFQGEPVSLSRREVDLLAHLANADGRWVPPDMLNERLYG
CCHHHHEECCCEEECCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LGEEIGSNALNVHIHNIRRKLGAEAIETVRGLGYRLGWRLAS
HHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHCEEECC
>Mature Secondary Structure
MRILLVEDDKLIGRGIVAGLHKHGIAVHHVGTAEEAEATHAEDTFHALVLDLGLPDRDGM
CEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHCCHHHHHHHHHEECCCCCCCHH
ELLASMRAVEPQLPVLILTARDAIEHRLKGLHEGADDYMIKPFDLRELAARLHALVRRTQ
HHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHC
GRAAQVISAGPLRLEPESGLAWFQGEPVSLSRREVDLLAHLANADGRWVPPDMLNERLYG
CCHHHHEECCCEEECCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LGEEIGSNALNVHIHNIRRKLGAEAIETVRGLGYRLGWRLAS
HHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796; 11929534 [H]