| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is ydeG [H]
Identifier: 94311305
GI number: 94311305
Start: 2580631
End: 2581857
Strand: Reverse
Name: ydeG [H]
Synonym: Rmet_2369
Alternate gene names: 94311305
Gene position: 2581857-2580631 (Counterclockwise)
Preceding gene: 94311320
Following gene: 94311304
Centisome position: 65.73
GC content: 70.17
Gene sequence:
>1227_bases ATGACGCCACCTGCTTCGCTGCCACCGCCCGCTGCGACAGATGCCCGCCGCAATGTGGGCCTGCTGATGGCCGCCCAATC GCTGGGCGGCGCCGCGCCACCCATCATCATTTCGCTGGGCGGCATCGTGGGTCAGATGCTGGCCAGCAACCCTTCGCTGG CCACACTGCCGGTCAGCCTCTACAACCTGGGGCTGGCGCTGTCGACCATCCCTGCGGCCCTGCTGATGCGTCGTCTGGGC CGGCGCGCGGCCTATGCGTTGGGGGCGCTGCTGGGTTCGGTGTCCGGGCTCATCGCCGCATTGGGCGTCCTGTGGGGCAG TTTCGAGACCTTCTGCGTGGGCACGGCGATGGCTGGCTTCTACGGCGCGTGCGTGCAGAGCTACCGCTTCGCGGCCAGCG ATGCGGTGCCGCCGCCGCAGCGCGCCACCGTCATCTCGCGCATCATGATCGGCGGCCTGATCGCCGCGGTCATCGGCCCG CAGGTCGTCATCTGGACGCGCGACGCCTGGCCCATGGCGCCGTTCGCTGGCAGCTTCCTCGGGCAGGCGGGCCTGGCGCT GCTGGCCTTGCCGCTGCTGCTGATGCTGCGCATGCCGCCGCCCCAGGCGTCCGCCGTCGTGGGCGCGGCGCGCCCGCTGG CAGTGATCGCGCGCAGTCCAGGCTTCGTCGTGGCCGTCACGGCGGGCATCGTGTCCTACGGCCTGATGGCTTTCATCATG ACGGCCGCGCCGATGGCCATGGTGGGTTGCGGCCACACCGTGGGCGAGGCGGCGCTGGGCATCCAGTGGCACGTGCTCGC CATGTTTGCGCCGAGCTTCTTCACCGGCCACCTGATCGCGCGTTTCGGCAAGACCGCCATCACGGCGTGCGGACTGGTGT TGATCGGCACCTCTGGCCTGCTGGCCCTGGCCGGCCTCGAACTTCTGCACTTCTGGGGCTCGCTGATCCTGCTGGGCGTG GGCTGGAATTTCGGCTTCATCGGCGCCACGGCGCTGGTGACCGACTGCTACACCGCGCCCGAGCGCGCCAAGGTGCAGGC ACTCAACGATTTCCTGGTGTTCGGCACCGTGGCCGTCGCCTCGTTCGGGTCGGGCCGGCTGCTGAACACCTCGGGCTGGG AAACCATCAACGGCCTGATGCTGCCCCTCATCGCGCTCGTGCTGGCCCTGCTGGGTTGGCTGGCTTGGCGCAACCGCCGG CAGTCGGCGGCGGCCGCTGCGCCATGA
Upstream 100 bases:
>100_bases TCAAGGCACTTCCTCGAAGGCAGGAAGTGCGGCAGGTCTTCCTGCCGGTGTTCTCATGCTGCGGCGTGGGTTCGCCTGAC ACCTCATTCCTGATTCGTTC
Downstream 100 bases:
>100_bases AGCCGTCTGGGTCCGGTCGAGCGTGCGGGTCAACCCGGTTTCATATTCGATGTTCCAAAACCATGAGGAGTTCGCGATGA CGACAAGTTACCGGCAACTG
Product: major facilitator superfamily transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MTPPASLPPPAATDARRNVGLLMAAQSLGGAAPPIIISLGGIVGQMLASNPSLATLPVSLYNLGLALSTIPAALLMRRLG RRAAYALGALLGSVSGLIAALGVLWGSFETFCVGTAMAGFYGACVQSYRFAASDAVPPPQRATVISRIMIGGLIAAVIGP QVVIWTRDAWPMAPFAGSFLGQAGLALLALPLLLMLRMPPPQASAVVGAARPLAVIARSPGFVVAVTAGIVSYGLMAFIM TAAPMAMVGCGHTVGEAALGIQWHVLAMFAPSFFTGHLIARFGKTAITACGLVLIGTSGLLALAGLELLHFWGSLILLGV GWNFGFIGATALVTDCYTAPERAKVQALNDFLVFGTVAVASFGSGRLLNTSGWETINGLMLPLIALVLALLGWLAWRNRR QSAAAAAP
Sequences:
>Translated_408_residues MTPPASLPPPAATDARRNVGLLMAAQSLGGAAPPIIISLGGIVGQMLASNPSLATLPVSLYNLGLALSTIPAALLMRRLG RRAAYALGALLGSVSGLIAALGVLWGSFETFCVGTAMAGFYGACVQSYRFAASDAVPPPQRATVISRIMIGGLIAAVIGP QVVIWTRDAWPMAPFAGSFLGQAGLALLALPLLLMLRMPPPQASAVVGAARPLAVIARSPGFVVAVTAGIVSYGLMAFIM TAAPMAMVGCGHTVGEAALGIQWHVLAMFAPSFFTGHLIARFGKTAITACGLVLIGTSGLLALAGLELLHFWGSLILLGV GWNFGFIGATALVTDCYTAPERAKVQALNDFLVFGTVAVASFGSGRLLNTSGWETINGLMLPLIALVLALLGWLAWRNRR QSAAAAAP >Mature_407_residues TPPASLPPPAATDARRNVGLLMAAQSLGGAAPPIIISLGGIVGQMLASNPSLATLPVSLYNLGLALSTIPAALLMRRLGR RAAYALGALLGSVSGLIAALGVLWGSFETFCVGTAMAGFYGACVQSYRFAASDAVPPPQRATVISRIMIGGLIAAVIGPQ VVIWTRDAWPMAPFAGSFLGQAGLALLALPLLLMLRMPPPQASAVVGAARPLAVIARSPGFVVAVTAGIVSYGLMAFIMT AAPMAMVGCGHTVGEAALGIQWHVLAMFAPSFFTGHLIARFGKTAITACGLVLIGTSGLLALAGLELLHFWGSLILLGVG WNFGFIGATALVTDCYTAPERAKVQALNDFLVFGTVAVASFGSGRLLNTSGWETINGLMLPLIALVLALLGWLAWRNRRQ SAAAAAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 41852; Mature: 41721
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPASLPPPAATDARRNVGLLMAAQSLGGAAPPIIISLGGIVGQMLASNPSLATLPVSL CCCCCCCCCCCCCCHHCCCHHEEEEHHCCCCCCHHHEEHHHHHHHHHHCCCCCEEEHHHH YNLGLALSTIPAALLMRRLGRRAAYALGALLGSVSGLIAALGVLWGSFETFCVGTAMAGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH YGACVQSYRFAASDAVPPPQRATVISRIMIGGLIAAVIGPQVVIWTRDAWPMAPFAGSFL HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHH GQAGLALLALPLLLMLRMPPPQASAVVGAARPLAVIARSPGFVVAVTAGIVSYGLMAFIM HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHH TAAPMAMVGCGHTVGEAALGIQWHVLAMFAPSFFTGHLIARFGKTAITACGLVLIGTSGL HHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LALAGLELLHFWGSLILLGVGWNFGFIGATALVTDCYTAPERAKVQALNDFLVFGTVAVA HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH SFGSGRLLNTSGWETINGLMLPLIALVLALLGWLAWRNRRQSAAAAAP HCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCC >Mature Secondary Structure TPPASLPPPAATDARRNVGLLMAAQSLGGAAPPIIISLGGIVGQMLASNPSLATLPVSL CCCCCCCCCCCCCHHCCCHHEEEEHHCCCCCCHHHEEHHHHHHHHHHCCCCCEEEHHHH YNLGLALSTIPAALLMRRLGRRAAYALGALLGSVSGLIAALGVLWGSFETFCVGTAMAGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH YGACVQSYRFAASDAVPPPQRATVISRIMIGGLIAAVIGPQVVIWTRDAWPMAPFAGSFL HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHH GQAGLALLALPLLLMLRMPPPQASAVVGAARPLAVIARSPGFVVAVTAGIVSYGLMAFIM HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHH TAAPMAMVGCGHTVGEAALGIQWHVLAMFAPSFFTGHLIARFGKTAITACGLVLIGTSGL HHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LALAGLELLHFWGSLILLGVGWNFGFIGATALVTDCYTAPERAKVQALNDFLVFGTVAVA HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH SFGSGRLLNTSGWETINGLMLPLIALVLALLGWLAWRNRRQSAAAAAP HCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]