| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is yqhA [C]
Identifier: 94311210
GI number: 94311210
Start: 2494832
End: 2495386
Strand: Direct
Name: yqhA [C]
Synonym: Rmet_2272
Alternate gene names: 94311210
Gene position: 2494832-2495386 (Clockwise)
Preceding gene: 94311209
Following gene: 94311211
Centisome position: 63.51
GC content: 62.52
Gene sequence:
>555_bases ATGGCCCACTCCCCGCTTCGCCCGATTCCCCGCATCATCTTCGCCTCGCGCTGGCTGCAACTGCCGCTCTATCTCGGTCT GATCGTCGCGCAAGGCGTCTACGTCTATCACTTCCTGGTCGAGGTCTGGCACCTGCTGTCGCACGTCACGACCTTCGACG AGACCAAGATCATGCTCGTCGTGCTGGGCCTGATCGACGTGGTGATGATCTCGAACCTGCTGATCATGGTCATCGTGGGC GGATATGAAACCTTCGTGTCGCGCCTGGGCATCGACAACCACCCCGACGAGCCCGAATGGCTGGACCACGTCAATGCCGG CGTGCTCAAGGTCAAGCTGTCGATGGCGCTGATCGGCATTTCGTCGATCCACCTGCTCAAGACCTTCATCGACGCCGACC AGCGCAGCGAACATACGATCATGTGGCAGGTCATCATCCACCTGGCATTCCTGCTCTCGGCCGTGGCGATGGCCTGGGTG GACCGCATGGTCACGCATCCGCACCCGGCCGCCGGACCCGGCGCTGCCGGCGGTGCGGCAGAAACGACACACTGA
Upstream 100 bases:
>100_bases CCGGTGACGTTCGGTTACCGAATCGCGGCGCGAGGTGTCAAATGCGCACGGTACAATCAGAACCCATCCTGATTGTCTTG CTGTACTTACATTCAATTCC
Downstream 100 bases:
>100_bases CCGCGCGCCGGGACGGTTGCCCGCCACCCGGGTGACGCCTGCGGCCATCCCGCCACCAAACCTCGTGTCGACGGCTGTAT GCAAAGCGGCAGCCGTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MAHSPLRPIPRIIFASRWLQLPLYLGLIVAQGVYVYHFLVEVWHLLSHVTTFDETKIMLVVLGLIDVVMISNLLIMVIVG GYETFVSRLGIDNHPDEPEWLDHVNAGVLKVKLSMALIGISSIHLLKTFIDADQRSEHTIMWQVIIHLAFLLSAVAMAWV DRMVTHPHPAAGPGAAGGAAETTH
Sequences:
>Translated_184_residues MAHSPLRPIPRIIFASRWLQLPLYLGLIVAQGVYVYHFLVEVWHLLSHVTTFDETKIMLVVLGLIDVVMISNLLIMVIVG GYETFVSRLGIDNHPDEPEWLDHVNAGVLKVKLSMALIGISSIHLLKTFIDADQRSEHTIMWQVIIHLAFLLSAVAMAWV DRMVTHPHPAAGPGAAGGAAETTH >Mature_183_residues AHSPLRPIPRIIFASRWLQLPLYLGLIVAQGVYVYHFLVEVWHLLSHVTTFDETKIMLVVLGLIDVVMISNLLIMVIVGG YETFVSRLGIDNHPDEPEWLDHVNAGVLKVKLSMALIGISSIHLLKTFIDADQRSEHTIMWQVIIHLAFLLSAVAMAWVD RMVTHPHPAAGPGAAGGAAETTH
Specific function: Unknown
COG id: COG2862
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0114 family [H]
Homologues:
Organism=Escherichia coli, GI1789376, Length=162, Percent_Identity=40.1234567901235, Blast_Score=133, Evalue=6e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005134 - InterPro: IPR020761 - InterPro: IPR020765 [H]
Pfam domain/function: PF03350 UPF0114 [H]
EC number: NA
Molecular weight: Translated: 20408; Mature: 20277
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHSPLRPIPRIIFASRWLQLPLYLGLIVAQGVYVYHFLVEVWHLLSHVTTFDETKIMLV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH VLGLIDVVMISNLLIMVIVGGYETFVSRLGIDNHPDEPEWLDHVNAGVLKVKLSMALIGI HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHH SSIHLLKTFIDADQRSEHTIMWQVIIHLAFLLSAVAMAWVDRMVTHPHPAAGPGAAGGAA HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC ETTH CCCC >Mature Secondary Structure AHSPLRPIPRIIFASRWLQLPLYLGLIVAQGVYVYHFLVEVWHLLSHVTTFDETKIMLV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH VLGLIDVVMISNLLIMVIVGGYETFVSRLGIDNHPDEPEWLDHVNAGVLKVKLSMALIGI HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHH SSIHLLKTFIDADQRSEHTIMWQVIIHLAFLLSAVAMAWVDRMVTHPHPAAGPGAAGGAA HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC ETTH CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]