Click here to switch to the map view.

The map label for this gene is 94311168

Identifier: 94311168

GI number: 94311168

Start: 2446159

End: 2446467

Strand: Reverse

Name: 94311168

Synonym: Rmet_2230

Alternate gene names: NA

Gene position: 2446467-2446159 (Counterclockwise)

Preceding gene: 94311169

Following gene: 94311167

Centisome position: 62.28

GC content: 62.14

Gene sequence:

>309_bases
ATGCTGAGCTGGATGGTGTGGACCACGCCCGTGGCGGTGTTCTTTGCCGCGGTGGTGGTGATGCTGATCGGCATGACGAT
CTGGGAAACCCGTACGCCGACGTTGATGCGCAAGGGCTTCCTGCCCATCGCCACCACACGTGGCGACCGCCTGTTCATCG
GGCTGATGTGCGCGGCGTGGATCAACCTCGCATGGGTAGGACTGGGTGAAAAGATCCAGAGCTGGCTGCAACTGGCCGAA
GAACCATCGATATGGATCAGTGCGGGCGCCTCTGCTCTGGTGCTGCTGCTGATCATGCGCCGGGGCTAG

Upstream 100 bases:

>100_bases
CCGGCGTGCTGACCATCGTGCCGGGCGCCATCGTGATCTGGTTCGTGCGGCACTACATCGCGAAAGGCTTCGCGATGGGC
CGCGTTTGAGGGAGGCACCG

Downstream 100 bases:

>100_bases
TGCTCCGGCGCAACGCGGATTTTGCTGATGTGGGCTGCGAGATCTTGTCCCTTCCCCAGGGCCGCAACCCAATTACAGAG
AGCCGGGGAAGGGGTTCATG

Product: putative small integral membrane protein

Products: NA

Alternate protein names: Transmembrane Protein; Small Integral Membrane Protein-Like Protein; Integral Transmembrane Protein; Small Integral Membrane Protein; Transmembrane Lipoprotein COG

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MLSWMVWTTPVAVFFAAVVVMLIGMTIWETRTPTLMRKGFLPIATTRGDRLFIGLMCAAWINLAWVGLGEKIQSWLQLAE
EPSIWISAGASALVLLLIMRRG

Sequences:

>Translated_102_residues
MLSWMVWTTPVAVFFAAVVVMLIGMTIWETRTPTLMRKGFLPIATTRGDRLFIGLMCAAWINLAWVGLGEKIQSWLQLAE
EPSIWISAGASALVLLLIMRRG
>Mature_102_residues
MLSWMVWTTPVAVFFAAVVVMLIGMTIWETRTPTLMRKGFLPIATTRGDRLFIGLMCAAWINLAWVGLGEKIQSWLQLAE
EPSIWISAGASALVLLLIMRRG

Specific function: Unknown

COG id: COG5477

COG function: function code S; Predicted small integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11394; Mature: 11394

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
6.9 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSWMVWTTPVAVFFAAVVVMLIGMTIWETRTPTLMRKGFLPIATTRGDRLFIGLMCAAW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEECCCCCHHHHHHHHHH
INLAWVGLGEKIQSWLQLAEEPSIWISAGASALVLLLIMRRG
HHHHHHCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCC
>Mature Secondary Structure
MLSWMVWTTPVAVFFAAVVVMLIGMTIWETRTPTLMRKGFLPIATTRGDRLFIGLMCAAW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEECCCCCHHHHHHHHHH
INLAWVGLGEKIQSWLQLAEEPSIWISAGASALVLLLIMRRG
HHHHHHCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA