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The map label for this gene is recR [H]

Identifier: 94311065

GI number: 94311065

Start: 2309028

End: 2309642

Strand: Reverse

Name: recR [H]

Synonym: Rmet_2127

Alternate gene names: 94311065

Gene position: 2309642-2309028 (Counterclockwise)

Preceding gene: 94311066

Following gene: 94311064

Centisome position: 58.8

GC content: 66.67

Gene sequence:

>615_bases
ATGAGAGCGGCGCCGCCCACCTCGCTGCAGGCGCTGATCGAGGCGCTCAAGGTGCTGCCCGGCGTTGGACCGAAGTCGGC
CCAACGCATGGCGTATCACCTGCTGCAGCACGACCGCGAAGGCGCGCGCAAGCTTGGCGACGCGCTGCGCGGGGCCGTCG
ATGGCATCCGCCATTGCACGCGCTGCAATACCTTCACCGAACTCGAAATCTGCGGAACCTGCAGCGATCCAGAGCGTGAC
GCGACGCTGCTCTGCGTGGTCGAAACGCCGGCCGATCAGGTCATGATCGAGCAGACGCTGACCTATCGCGGCCAGTATTT
CGTGCTGATGGGGCGGCTCTCGCCGCTCGACGGCATCGGTCCGAAGGAGATTCATCTCGACCGCCTGCTGGCACGTGCTA
CTGACCCCGAACTCGGCGGCCCGGCCAGCGAGGTGATCGTCGCCACCAACTTCACCAGTGAGGGCGAGGCCACCGCGCAC
TACATCGGCGAAATGCTGAAGGCGCGCGGGCTGAAGGTCTCGCGTCTGGCGCGAGGCGTGCCGGTGGGTGGCGAACTGGA
ATACGTGGATGCGGGCACCATCGCCCGCGCCGTGATGGACCGTCGCACCCTGTAA

Upstream 100 bases:

>100_bases
ACCACGCAAGAAAAGATGGGTTCGATGACGTCGGGTCTGCCGCTGCCTCCGGGCTTCAAGCTGCCATTCTGATGACACGT
TCCGACCAGGCGGCTCTGTC

Downstream 100 bases:

>100_bases
CGGACCATGAATCTGGCGCGCTTCGATCTCGTCACGCTGGGGCTGTTTGTGGCCGTGGCACGGCAGGGCAGTATCTCGGC
CGGCGCGCGGCAATCGCATC

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MRAAPPTSLQALIEALKVLPGVGPKSAQRMAYHLLQHDREGARKLGDALRGAVDGIRHCTRCNTFTELEICGTCSDPERD
ATLLCVVETPADQVMIEQTLTYRGQYFVLMGRLSPLDGIGPKEIHLDRLLARATDPELGGPASEVIVATNFTSEGEATAH
YIGEMLKARGLKVSRLARGVPVGGELEYVDAGTIARAVMDRRTL

Sequences:

>Translated_204_residues
MRAAPPTSLQALIEALKVLPGVGPKSAQRMAYHLLQHDREGARKLGDALRGAVDGIRHCTRCNTFTELEICGTCSDPERD
ATLLCVVETPADQVMIEQTLTYRGQYFVLMGRLSPLDGIGPKEIHLDRLLARATDPELGGPASEVIVATNFTSEGEATAH
YIGEMLKARGLKVSRLARGVPVGGELEYVDAGTIARAVMDRRTL
>Mature_204_residues
MRAAPPTSLQALIEALKVLPGVGPKSAQRMAYHLLQHDREGARKLGDALRGAVDGIRHCTRCNTFTELEICGTCSDPERD
ATLLCVVETPADQVMIEQTLTYRGQYFVLMGRLSPLDGIGPKEIHLDRLLARATDPELGGPASEVIVATNFTSEGEATAH
YIGEMLKARGLKVSRLARGVPVGGELEYVDAGTIARAVMDRRTL

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=197, Percent_Identity=54.3147208121827, Blast_Score=203, Evalue=6e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 22066; Mature: 22066

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAAPPTSLQALIEALKVLPGVGPKSAQRMAYHLLQHDREGARKLGDALRGAVDGIRHCT
CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RCNTFTELEICGTCSDPERDATLLCVVETPADQVMIEQTLTYRGQYFVLMGRLSPLDGIG
HCCCCCEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCCC
PKEIHLDRLLARATDPELGGPASEVIVATNFTSEGEATAHYIGEMLKARGLKVSRLARGV
CHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHCCC
PVGGELEYVDAGTIARAVMDRRTL
CCCCCEEEECHHHHHHHHHHHCCC
>Mature Secondary Structure
MRAAPPTSLQALIEALKVLPGVGPKSAQRMAYHLLQHDREGARKLGDALRGAVDGIRHCT
CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RCNTFTELEICGTCSDPERDATLLCVVETPADQVMIEQTLTYRGQYFVLMGRLSPLDGIG
HCCCCCEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCCC
PKEIHLDRLLARATDPELGGPASEVIVATNFTSEGEATAHYIGEMLKARGLKVSRLARGV
CHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHCCC
PVGGELEYVDAGTIARAVMDRRTL
CCCCCEEEECHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA