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The map label for this gene is rodZ [H]

Identifier: 94311045

GI number: 94311045

Start: 2289011

End: 2290066

Strand: Reverse

Name: rodZ [H]

Synonym: Rmet_2107

Alternate gene names: 94311045

Gene position: 2290066-2289011 (Counterclockwise)

Preceding gene: 94311046

Following gene: 94311044

Centisome position: 58.3

GC content: 65.15

Gene sequence:

>1056_bases
ATGAGTGAACAAGAGCGCGCCGACAGCCAGGCCGCGACGACGGGTCACGTCGGCGGTGGCGCGACAGACTCCGACCGCGA
GGCTGTTGCCCGCGAGATCGGGGCGAAATTGAAAGACGCTCGCGAGGCGCAGCGGCTTTCTCTGGAAGATGTCAGTGCAC
GACTGAAGGTGGCAGCGTCGAAGCTCGTCGCCATTGAGTCGGGCAATGTATCGAGCCTGCCCGATGTGACGTTCGCGAAG
GGTGTGATGCGTGCTTACGCGCGGACGCTCCAGGTGAATATCGACGGGTTGCTGGGGCGCTATCACGCGCAGGCTCAGGC
CACGCCGGTTACCGGGATTACGCAGCGTCATGAGGGCGCACTCAATCAGGCTTTCGACGATCGCAAGCGCTTCGGTTCGA
AGGGTACTGGCGGTGGTGCCGGTGGGCGCTGGGTCTGGCTGGTTTGCGTGCTGGCCTTGATCGGCGTTGGCGGATATTTC
GGCTTTGATCATGCCAAGGCGTGGGTCGAGGCCCGCAGCAAGGCCGCGGCCGAGGCGCCCAAACCGGCTGTTGCCGAGGA
GCGGGCCCAGGAGCAGAGCAATAACGATGGCACGGTGAGCGCAGCGTTGCCGCCGGTGATGACCGGCAACGACTCGCCAG
CACCGTCCGAGACTGCGTCGGCATCGGCCGCGCAGTCCGTGGCCGTCACGCCGGCCCCGGCTACCATGTCGGCGGGTTTG
CCGATGGTCACGGGTGGAGAGGCTCCCGCCGAGGCGGCAAAGACGCCAGCCGCTACGCCGCCTGCCACGGTTCCCGCTGC
GCAGGGCGACAGTGCGGGTGCTGTGCAGATCCGTTTCTCGGCCGATAGCTGGTATGAAGTACGAGACCGCACCGGCAAGG
TCATTCTTGGCGGTACCGCCAAGGCTGGCGATACCGTGTCGGGTGGTGGCGCGGGTGGGCCCTACAAGATCATTCTCGGG
AATGTGAAGGGCGTTGAGTCGCTGACGCACAATGGTGCAGCAGTGAACTTCCAGGCGTCCAACCGGAATAATGTGGCCCG
CCTGACCCTGCAGTAA

Upstream 100 bases:

>100_bases
CGACAGGGCGATACCGAAACACAGAACGCACTCACGGCACAACTGCGCAGCCGGTTCCCCGACTCGCGCGAGTTGACCGC
ATACGAGAGAGGAGCTTGGG

Downstream 100 bases:

>100_bases
TGCGCTGCGGGTGGCGCGGCCAGCCATGCAAGAAAAGGTGGTAATGCAATGAACCAGAACGCTTTCCAGCCCGTGATCCC
GGGCCCGCTGCCGCGTCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MSEQERADSQAATTGHVGGGATDSDREAVAREIGAKLKDAREAQRLSLEDVSARLKVAASKLVAIESGNVSSLPDVTFAK
GVMRAYARTLQVNIDGLLGRYHAQAQATPVTGITQRHEGALNQAFDDRKRFGSKGTGGGAGGRWVWLVCVLALIGVGGYF
GFDHAKAWVEARSKAAAEAPKPAVAEERAQEQSNNDGTVSAALPPVMTGNDSPAPSETASASAAQSVAVTPAPATMSAGL
PMVTGGEAPAEAAKTPAATPPATVPAAQGDSAGAVQIRFSADSWYEVRDRTGKVILGGTAKAGDTVSGGGAGGPYKIILG
NVKGVESLTHNGAAVNFQASNRNNVARLTLQ

Sequences:

>Translated_351_residues
MSEQERADSQAATTGHVGGGATDSDREAVAREIGAKLKDAREAQRLSLEDVSARLKVAASKLVAIESGNVSSLPDVTFAK
GVMRAYARTLQVNIDGLLGRYHAQAQATPVTGITQRHEGALNQAFDDRKRFGSKGTGGGAGGRWVWLVCVLALIGVGGYF
GFDHAKAWVEARSKAAAEAPKPAVAEERAQEQSNNDGTVSAALPPVMTGNDSPAPSETASASAAQSVAVTPAPATMSAGL
PMVTGGEAPAEAAKTPAATPPATVPAAQGDSAGAVQIRFSADSWYEVRDRTGKVILGGTAKAGDTVSGGGAGGPYKIILG
NVKGVESLTHNGAAVNFQASNRNNVARLTLQ
>Mature_350_residues
SEQERADSQAATTGHVGGGATDSDREAVAREIGAKLKDAREAQRLSLEDVSARLKVAASKLVAIESGNVSSLPDVTFAKG
VMRAYARTLQVNIDGLLGRYHAQAQATPVTGITQRHEGALNQAFDDRKRFGSKGTGGGAGGRWVWLVCVLALIGVGGYFG
FDHAKAWVEARSKAAAEAPKPAVAEERAQEQSNNDGTVSAALPPVMTGNDSPAPSETASASAAQSVAVTPAPATMSAGLP
MVTGGEAPAEAAKTPAATPPATVPAAQGDSAGAVQIRFSADSWYEVRDRTGKVILGGTAKAGDTVSGGGAGGPYKIILGN
VKGVESLTHNGAAVNFQASNRNNVARLTLQ

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788864, Length=351, Percent_Identity=28.4900284900285, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 35783; Mature: 35652

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS50096 IQ ; PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQERADSQAATTGHVGGGATDSDREAVAREIGAKLKDAREAQRLSLEDVSARLKVAAS
CCCHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
KLVAIESGNVSSLPDVTFAKGVMRAYARTLQVNIDGLLGRYHAQAQATPVTGITQRHEGA
HEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCCCCCCCHHHHHHH
LNQAFDDRKRFGSKGTGGGAGGRWVWLVCVLALIGVGGYFGFDHAKAWVEARSKAAAEAP
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
KPAVAEERAQEQSNNDGTVSAALPPVMTGNDSPAPSETASASAAQSVAVTPAPATMSAGL
CCCHHHHHHHHHCCCCCEEEECCCCEECCCCCCCCCHHHHHHHHCEEEECCCCCHHHCCC
PMVTGGEAPAEAAKTPAATPPATVPAAQGDSAGAVQIRFSADSWYEVRDRTGKVILGGTA
CEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCCEEECCCC
KAGDTVSGGGAGGPYKIILGNVKGVESLTHNGAAVNFQASNRNNVARLTLQ
CCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCEEEEEECCCCCCEEEEEEC
>Mature Secondary Structure 
SEQERADSQAATTGHVGGGATDSDREAVAREIGAKLKDAREAQRLSLEDVSARLKVAAS
CCHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
KLVAIESGNVSSLPDVTFAKGVMRAYARTLQVNIDGLLGRYHAQAQATPVTGITQRHEGA
HEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCCCCCCCHHHHHHH
LNQAFDDRKRFGSKGTGGGAGGRWVWLVCVLALIGVGGYFGFDHAKAWVEARSKAAAEAP
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
KPAVAEERAQEQSNNDGTVSAALPPVMTGNDSPAPSETASASAAQSVAVTPAPATMSAGL
CCCHHHHHHHHHCCCCCEEEECCCCEECCCCCCCCCHHHHHHHHCEEEECCCCCHHHCCC
PMVTGGEAPAEAAKTPAATPPATVPAAQGDSAGAVQIRFSADSWYEVRDRTGKVILGGTA
CEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCCEEECCCC
KAGDTVSGGGAGGPYKIILGNVKGVESLTHNGAAVNFQASNRNNVARLTLQ
CCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCEEEEEECCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA