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The map label for this gene is ywnA [H]

Identifier: 94311031

GI number: 94311031

Start: 2273795

End: 2274229

Strand: Direct

Name: ywnA [H]

Synonym: Rmet_2093

Alternate gene names: 94311031

Gene position: 2273795-2274229 (Clockwise)

Preceding gene: 94311027

Following gene: 94311032

Centisome position: 57.89

GC content: 66.67

Gene sequence:

>435_bases
ATGAGCACCAGTAGCCGGTTTGCCGTCGCCGTTCACATCCTCACCCTGCTCGCGCAGGCCGAAGGACCGGTGCCGTCGTC
GATGATCGCCGGCAGCGTGGGAACCAACCCCGCACTCATCCGGCGCATGATCGGCGCGCTCACGGAGGCGGGCTTCGTCA
CCACGACAATGGGCAGCACCGGCGGCGCAATGCTTACGCGACCCGCCAGCCAGATCACATTGCTCGAGGTGTTTCAGGCC
ACGGAGACCACTGCGCTGATCACGCTGCACCAAAGCGCGCCGAATCCTGCTTGCCTGGTGGGCCGCGAGATCACCGGCAC
CCTGCAGGTGGTCGCCGATCGGGCGCAAGCCGCCATGGATGCCACGCTCGCGGAGATCACGATTGCCAGCATGCTCGGAG
AAGTCGAACATGCCGCCCGGCGCCGCAAGCGCTGA

Upstream 100 bases:

>100_bases
GTAGCGTCCATCACGAAAAACACGCGGTATTGCCACGCCAACTCGTCGCTTGACGCGCCGGCGATATGTAACTACCATAG
TTTCACATTGAGATTTCCGT

Downstream 100 bases:

>100_bases
TTTTTTTGCCCGGATATGTAACCACATTGGTTTCATATCAACCACTTCCGAGAGGATACGACCATGAAGATCGCCATCAT
CGGTGCTACCGGCAACGTAG

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MSTSSRFAVAVHILTLLAQAEGPVPSSMIAGSVGTNPALIRRMIGALTEAGFVTTTMGSTGGAMLTRPASQITLLEVFQA
TETTALITLHQSAPNPACLVGREITGTLQVVADRAQAAMDATLAEITIASMLGEVEHAARRRKR

Sequences:

>Translated_144_residues
MSTSSRFAVAVHILTLLAQAEGPVPSSMIAGSVGTNPALIRRMIGALTEAGFVTTTMGSTGGAMLTRPASQITLLEVFQA
TETTALITLHQSAPNPACLVGREITGTLQVVADRAQAAMDATLAEITIASMLGEVEHAARRRKR
>Mature_143_residues
STSSRFAVAVHILTLLAQAEGPVPSSMIAGSVGTNPALIRRMIGALTEAGFVTTTMGSTGGAMLTRPASQITLLEVFQAT
ETTALITLHQSAPNPACLVGREITGTLQVVADRAQAAMDATLAEITIASMLGEVEHAARRRKR

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 14973; Mature: 14841

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSSRFAVAVHILTLLAQAEGPVPSSMIAGSVGTNPALIRRMIGALTEAGFVTTTMGST
CCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEECCCC
GGAMLTRPASQITLLEVFQATETTALITLHQSAPNPACLVGREITGTLQVVADRAQAAMD
CCEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHH
ATLAEITIASMLGEVEHAARRRKR
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STSSRFAVAVHILTLLAQAEGPVPSSMIAGSVGTNPALIRRMIGALTEAGFVTTTMGST
CCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEECCCC
GGAMLTRPASQITLLEVFQATETTALITLHQSAPNPACLVGREITGTLQVVADRAQAAMD
CCEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHH
ATLAEITIASMLGEVEHAARRRKR
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]