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The map label for this gene is nirC [H]

Identifier: 94311017

GI number: 94311017

Start: 2257848

End: 2258237

Strand: Direct

Name: nirC [H]

Synonym: Rmet_2079

Alternate gene names: 94311017

Gene position: 2257848-2258237 (Clockwise)

Preceding gene: 94311016

Following gene: 94311018

Centisome position: 57.48

GC content: 65.64

Gene sequence:

>390_bases
ATGATGTCGGCATTTGCCCCACTCGCTGGCGAACCCATGCCAACCCTGCGCTGGATCTGCATTCCCATCCTTTCGTGTAT
TGCCGCCACGGCTATCGCCGCCGAGCCACCGGCAGCCGCCCCGACGCCTGCCAGACAAGCCGAGCTCTTCCGCCTGCTAC
GCGATGACTGCGGCGCCTGTCATGGCATGACGCTGCAGGGAGGGCTCGGATCACCGCTGACGGCTGCGGCGCTAGCCGAC
AAACCGCGCGACGGACTCGTCGCCACGGTGCTTCAGGGCAGGCCGGGAACCGCGATGCCGCCGTGGCGGCCATTCATGAC
ACAGGACGAAGCACGATGGTTGATCGATCGACTCCAATCCGGGCAAGTGCCCGCCGTACCGAAACCATGA

Upstream 100 bases:

>100_bases
CGCTGGTCTGCCCTCTGACACCTGAGGCGCGCCCGCATCGTCAACCGTCGAATCGCCCCAGCATTGACAGCGGTCAAGCC
GAAATGCTGGGTTCTTAATA

Downstream 100 bases:

>100_bases
TGCGCCGCACCGCACTTCCCGTCGTGCTGGCACTGAGCGCGCTGCTCGCCGGCTGCGCCACCGCGGTACGTGGCACCGGC
GATATGGGCGTCGTGGTCGA

Product: cytochrome c55X (precursor)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MMSAFAPLAGEPMPTLRWICIPILSCIAATAIAAEPPAAAPTPARQAELFRLLRDDCGACHGMTLQGGLGSPLTAAALAD
KPRDGLVATVLQGRPGTAMPPWRPFMTQDEARWLIDRLQSGQVPAVPKP

Sequences:

>Translated_129_residues
MMSAFAPLAGEPMPTLRWICIPILSCIAATAIAAEPPAAAPTPARQAELFRLLRDDCGACHGMTLQGGLGSPLTAAALAD
KPRDGLVATVLQGRPGTAMPPWRPFMTQDEARWLIDRLQSGQVPAVPKP
>Mature_129_residues
MMSAFAPLAGEPMPTLRWICIPILSCIAATAIAAEPPAAAPTPARQAELFRLLRDDCGACHGMTLQGGLGSPLTAAALAD
KPRDGLVATVLQGRPGTAMPPWRPFMTQDEARWLIDRLQSGQVPAVPKP

Specific function: Monoheme c-type cytochrome [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13595; Mature: 13595

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSAFAPLAGEPMPTLRWICIPILSCIAATAIAAEPPAAAPTPARQAELFRLLRDDCGAC
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
HGMTLQGGLGSPLTAAALADKPRDGLVATVLQGRPGTAMPPWRPFMTQDEARWLIDRLQS
CCCEECCCCCCCHHHHHHHCCCCCCEEEHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHC
GQVPAVPKP
CCCCCCCCC
>Mature Secondary Structure
MMSAFAPLAGEPMPTLRWICIPILSCIAATAIAAEPPAAAPTPARQAELFRLLRDDCGAC
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
HGMTLQGGLGSPLTAAALADKPRDGLVATVLQGRPGTAMPPWRPFMTQDEARWLIDRLQS
CCCEECCCCCCCHHHHHHHCCCCCCEEEHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHC
GQVPAVPKP
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8566817; 10984043 [H]