| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94310999
Identifier: 94310999
GI number: 94310999
Start: 2233648
End: 2234121
Strand: Reverse
Name: 94310999
Synonym: Rmet_2061
Alternate gene names: NA
Gene position: 2234121-2233648 (Counterclockwise)
Preceding gene: 94311000
Following gene: 94310998
Centisome position: 56.88
GC content: 66.03
Gene sequence:
>474_bases ATGGCGTTGCCATGGGCCCGGCCTGCCGCCGCGCAGTCGTCCGACGTGTACATGTGTAAGGGCGCCGATGGCGTGCCCGA GTACCGCAATGGCAATCCTGGCAACAGCAAGGACTGCAAGCGGCTGAACCTGCCGGATGTGGTCACCGTACCCGGCTCGC GCGCTGGTGGCGCGCCTTCGGGTGGCAAGTCGGCGGCAGCTACGTCGCCGACCAGCTTCCCGCGCGTGGATAGCGCTACG CAAAAGAGCCGTGATAGCGAGCGTCGCACAGTGCTGGAAACCGAGCTGCAGACCGAGGAGGCCAGGTTGGCCGGCCTGCG CGCCGAGTACAACAACGGCGAGCCGGAGCGCCAGGGCGGCGAGCGCAATTATCAGAAGTACCTGGATCGCGTCGCGCGGC TTCGTGACGACATCACCCGCAGCGAAGCCAATGTGGCATCGTTGCGCCGGGAGCTTTCCGGCTTGAAGGATTGA
Upstream 100 bases:
>100_bases GTTCATGGAAGCGATCTCGAGCAGGGTCTTCAGCAATGCCAGCGGCGCGTTGCCGCACCAGATGCGTGTGGGCTTCCCCA TTTTGGTGATGGTCGCGGCC
Downstream 100 bases:
>100_bases GTTGAATGCGCCGCCTGATTCGTGAAGTGTCCCGCAAGGTAGCAGGAACGGACCGCAAGCCGGACGCCGGCGAGCCGGCC GATCGTGATGCGGACATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MALPWARPAAAQSSDVYMCKGADGVPEYRNGNPGNSKDCKRLNLPDVVTVPGSRAGGAPSGGKSAAATSPTSFPRVDSAT QKSRDSERRTVLETELQTEEARLAGLRAEYNNGEPERQGGERNYQKYLDRVARLRDDITRSEANVASLRRELSGLKD
Sequences:
>Translated_157_residues MALPWARPAAAQSSDVYMCKGADGVPEYRNGNPGNSKDCKRLNLPDVVTVPGSRAGGAPSGGKSAAATSPTSFPRVDSAT QKSRDSERRTVLETELQTEEARLAGLRAEYNNGEPERQGGERNYQKYLDRVARLRDDITRSEANVASLRRELSGLKD >Mature_156_residues ALPWARPAAAQSSDVYMCKGADGVPEYRNGNPGNSKDCKRLNLPDVVTVPGSRAGGAPSGGKSAAATSPTSFPRVDSATQ KSRDSERRTVLETELQTEEARLAGLRAEYNNGEPERQGGERNYQKYLDRVARLRDDITRSEANVASLRRELSGLKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17039; Mature: 16908
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPWARPAAAQSSDVYMCKGADGVPEYRNGNPGNSKDCKRLNLPDVVTVPGSRAGGAPS CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC GGKSAAATSPTSFPRVDSATQKSRDSERRTVLETELQTEEARLAGLRAEYNNGEPERQGG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC ERNYQKYLDRVARLRDDITRSEANVASLRRELSGLKD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ALPWARPAAAQSSDVYMCKGADGVPEYRNGNPGNSKDCKRLNLPDVVTVPGSRAGGAPS CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC GGKSAAATSPTSFPRVDSATQKSRDSERRTVLETELQTEEARLAGLRAEYNNGEPERQGG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC ERNYQKYLDRVARLRDDITRSEANVASLRRELSGLKD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA